RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 TPM1P09493 284 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 METTL16Q86W50 562 aaKnown RBP9.03□□□□□ -0.96
VMA21-201ENST00000330374 TTC5Q8N0Z6 440 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 IPO4Q8TEX9 1081 aaKnown RBP9.03□□□□□ -0.96
VMA21-201ENST00000330374 RASSF4Q9H2L5 321 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 SAMSN1Q9NSI8 373 aaKnown RBP9.03□□□□□ -0.96
VMA21-201ENST00000330374 SH3TC1Q8TE82 1336 aa9.03□□□□□ -0.96
VMA21-201ENST00000330374 A0A1B0GUL7 405 aa9.02□□□□□ -0.96
VMA21-201ENST00000330374 IKBKBO14920 756 aa9.02□□□□□ -0.96
VMA21-201ENST00000330374 CCDC102BQ68D86 513 aa9.02□□□□□ -0.96
VMA21-201ENST00000330374 KRT40Q6A162 431 aa9.02□□□□□ -0.96
VMA21-201ENST00000330374 FOXR1Q6PIV2 292 aa9.02□□□□□ -0.96
VMA21-201ENST00000330374 BRAPQ7Z569 592 aa9.02□□□□□ -0.96
VMA21-201ENST00000330374 MPHOSPH8Q99549 860 aa9.02□□□□□ -0.96
VMA21-201ENST00000330374 FUT8Q9BYC5 575 aa9.02□□□□□ -0.96
VMA21-201ENST00000330374 INCENPQ9NQS7 918 aa9.02□□□□□ -0.96
VMA21-201ENST00000330374 HPS5Q9UPZ3 1129 aa9.02□□□□□ -0.96
VMA21-201ENST00000330374 MRFAP1Q9Y605 127 aa9.02□□□□□ -0.96
VMA21-201ENST00000330374 FMR1Q06787 632 aaKnown RBP eCLIP9.02□□□□□ -0.97
VMA21-201ENST00000330374 SLC39A14Q15043 492 aa9.02□□□□□ -0.97
VMA21-201ENST00000330374 KIF4BQ2VIQ3 1234 aa9.02□□□□□ -0.97
VMA21-201ENST00000330374 SENP2Q9HC62 589 aa9.02□□□□□ -0.97
VMA21-201ENST00000330374 KCNH3Q9ULD8 1083 aa9.02□□□□□ -0.97
VMA21-201ENST00000330374 AGLP35573 1532 aa9.02□□□□□ -0.97
VMA21-201ENST00000330374 DIP2BQ9P265 1576 aa9.02□□□□□ -0.97
VMA21-201ENST00000330374 ADORA1P30542 326 aa9.02□□□□□ -0.97
VMA21-201ENST00000330374 CHMP4BP1P59074 171 aa9.02□□□□□ -0.97
VMA21-201ENST00000330374 MAP3K9P80192 1104 aa9.02□□□□□ -0.97
VMA21-201ENST00000330374 GRIN1Q05586 938 aa9.02□□□□□ -0.97
VMA21-201ENST00000330374 ZBTB3Q9H5J0 574 aa9.02□□□□□ -0.97
VMA21-201ENST00000330374 AXIN2Q9Y2T1 843 aa9.02□□□□□ -0.97
VMA21-201ENST00000330374 BMP6P22004 513 aa9.02□□□□□ -0.97
VMA21-201ENST00000330374 PDAP1Q13442 181 aaKnown RBP9.02□□□□□ -0.97
VMA21-201ENST00000330374 ZNF569Q5MCW4 686 aa9.02□□□□□ -0.97
VMA21-201ENST00000330374 TTC39AQ5SRH9 613 aa9.02□□□□□ -0.97
VMA21-201ENST00000330374 JAKMIP3Q5VZ66 844 aa9.02□□□□□ -0.97
VMA21-201ENST00000330374 LEKR1Q6ZMV7 388 aa9.02□□□□□ -0.97
VMA21-201ENST00000330374 NKX2-3Q8TAU0 364 aa9.02□□□□□ -0.97
VMA21-201ENST00000330374 ZNF213O14771 459 aa9.01□□□□□ -0.97
VMA21-201ENST00000330374 METAP2P50579 478 aaKnown RBP eCLIP9.01□□□□□ -0.97
VMA21-201ENST00000330374 TMEM139Q8IV31 216 aa9.01□□□□□ -0.97
VMA21-201ENST00000330374 GDAP1L1Q96MZ0 367 aa9.01□□□□□ -0.97
VMA21-201ENST00000330374 TOMM22Q9NS69 142 aa9.01□□□□□ -0.97
VMA21-201ENST00000330374 POLR2DO15514 142 aaKnown RBP9.01□□□□□ -0.97
VMA21-201ENST00000330374 CASP1P29466 404 aa9.01□□□□□ -0.97
VMA21-201ENST00000330374 ANTXR2P58335 489 aa9.01□□□□□ -0.97
VMA21-201ENST00000330374 TRIM29Q14134 588 aa9.01□□□□□ -0.97
VMA21-201ENST00000330374 TC2NQ8N9U0 490 aa9.01□□□□□ -0.97
VMA21-201ENST00000330374 AGXT2Q9BYV1 514 aa9.01□□□□□ -0.97
VMA21-201ENST00000330374 PUS7LQ9H0K6 701 aaKnown RBP9.01□□□□□ -0.97
VMA21-201ENST00000330374 CWC15Q9P013 229 aaKnown RBP9.01□□□□□ -0.97
VMA21-201ENST00000330374 FAN1Q9Y2M0 1017 aa9.01□□□□□ -0.97
VMA21-201ENST00000330374 GCP02774 474 aa9.01□□□□□ -0.97
VMA21-201ENST00000330374 TUBB4AP04350 444 aa9.01□□□□□ -0.97
VMA21-201ENST00000330374 KCNJ6P48051 423 aa9.01□□□□□ -0.97
VMA21-201ENST00000330374 TRDNQ13061 729 aa9.01□□□□□ -0.97
VMA21-201ENST00000330374 SPECC1LQ69YQ0 1117 aa9.01□□□□□ -0.97
VMA21-201ENST00000330374 CMTR1Q8N1G2 835 aaKnown RBP9.01□□□□□ -0.97
VMA21-201ENST00000330374 JMYQ8N9B5 988 aa9.01□□□□□ -0.97
VMA21-201ENST00000330374 NCOA7Q8NI08 942 aa9.01□□□□□ -0.97
VMA21-201ENST00000330374 PALLDQ8WX93 1383 aa9.01□□□□□ -0.97
VMA21-201ENST00000330374 TEX33O43247 280 aa9□□□□□ -0.97
VMA21-201ENST00000330374 TXLNAP40222 546 aa9□□□□□ -0.97
VMA21-201ENST00000330374 RAPGEF4Q8WZA2 1011 aa9□□□□□ -0.97
VMA21-201ENST00000330374 HINFPQ9BQA5 517 aa9□□□□□ -0.97
VMA21-201ENST00000330374 SLC26A6Q9BXS9 759 aa9□□□□□ -0.97
VMA21-201ENST00000330374 RRP15Q9Y3B9 282 aaKnown RBP9□□□□□ -0.97
VMA21-201ENST00000330374 N4BP2Q86UW6 1770 aaPredicted RBP9□□□□□ -0.97
VMA21-201ENST00000330374 PLEKHG1Q9ULL1 1385 aa9□□□□□ -0.97
VMA21-201ENST00000330374 AFMP43652 599 aa9□□□□□ -0.97
VMA21-201ENST00000330374 SCARF1Q14162 830 aa9□□□□□ -0.97
VMA21-201ENST00000330374 ATG9AQ7Z3C6 839 aa9□□□□□ -0.97
VMA21-201ENST00000330374 RABGGTAQ92696 567 aa9□□□□□ -0.97
VMA21-201ENST00000330374 PNKPQ96T60 521 aa9□□□□□ -0.97
VMA21-201ENST00000330374 SERTAD1Q9UHV2 236 aa9□□□□□ -0.97
VMA21-201ENST00000330374 KCNJ14Q9UNX9 436 aa9□□□□□ -0.97
VMA21-201ENST00000330374 NCAPD2Q15021 1401 aa9□□□□□ -0.97
VMA21-201ENST00000330374 TOPAZ1Q8N9V7 1692 aa9□□□□□ -0.97
VMA21-201ENST00000330374 ZMYND10O75800 440 aa9□□□□□ -0.97
VMA21-201ENST00000330374 CDC5LQ99459 802 aaKnown RBP9□□□□□ -0.97
VMA21-201ENST00000330374 C19orf44Q9H6X5 657 aa9□□□□□ -0.97
VMA21-201ENST00000330374 TUBE1Q9UJT0 475 aa9□□□□□ -0.97
VMA21-201ENST00000330374 B4E1Z4 1266 aa9□□□□□ -0.97
VMA21-201ENST00000330374 SMYD4Q8IYR2 804 aaPredicted RBP9□□□□□ -0.97
VMA21-201ENST00000330374 RGS22Q8NE09 1264 aa9□□□□□ -0.97
VMA21-201ENST00000330374 KIFC2Q96AC6 838 aa9□□□□□ -0.97
VMA21-201ENST00000330374 RABEP2Q9H5N1 569 aa9□□□□□ -0.97
VMA21-201ENST00000330374 ABCB6Q9NP58 842 aa9□□□□□ -0.97
VMA21-201ENST00000330374 DIP2AQ14689 1571 aa9□□□□□ -0.97
VMA21-201ENST00000330374 TESPA1A2RU30 521 aaPredicted RBP8.99□□□□□ -0.97
VMA21-201ENST00000330374 ZAP70P43403 619 aa8.99□□□□□ -0.97
VMA21-201ENST00000330374 FAM193AP78312 1265 aa8.99□□□□□ -0.97
VMA21-201ENST00000330374 DHX8Q14562 1220 aaKnown RBP8.99□□□□□ -0.97
VMA21-201ENST00000330374 RRP12Q5JTH9 1297 aaKnown RBP8.99□□□□□ -0.97
VMA21-201ENST00000330374 RSRC2Q7L4I2 434 aaKnown RBP8.99□□□□□ -0.97
VMA21-201ENST00000330374 PPFIBP1Q86W92 1011 aa8.99□□□□□ -0.97
VMA21-201ENST00000330374 STAMQ92783 540 aa8.99□□□□□ -0.97
VMA21-201ENST00000330374 MAN1B1Q9UKM7 699 aa8.99□□□□□ -0.97
VMA21-201ENST00000330374 ABL1P00519 1130 aa8.99□□□□□ -0.97
VMA21-201ENST00000330374 CCDC175P0C221 793 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms