RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 MTF1Q14872 753 aa17.1■□□□□ 0.33
XRCC1-201ENST00000262887 RGPD2P0DJD1 1756 aa17.1■□□□□ 0.33
XRCC1-201ENST00000262887 SLC39A6Q13433 755 aa17.1■□□□□ 0.33
XRCC1-201ENST00000262887 FAM71BQ8TC56 605 aa17.1■□□□□ 0.33
XRCC1-201ENST00000262887 PPM1EQ8WY54 764 aa17.1■□□□□ 0.33
XRCC1-201ENST00000262887 SUGCTQ9HAC7 445 aa17.1■□□□□ 0.33
XRCC1-201ENST00000262887 KCNH3Q9ULD8 1083 aa17.1■□□□□ 0.33
XRCC1-201ENST00000262887 AKAP2Q9Y2D5 859 aa17.1■□□□□ 0.33
XRCC1-201ENST00000262887 A0A087WZG4 1122 aa17.09■□□□□ 0.33
XRCC1-201ENST00000262887 FAM237AA0A1B0GTK4 181 aa17.09■□□□□ 0.33
XRCC1-201ENST00000262887 KIF5CO60282 957 aa17.09■□□□□ 0.33
XRCC1-201ENST00000262887 IFIT1P09914 478 aaKnown RBP17.09■□□□□ 0.33
XRCC1-201ENST00000262887 PRR29P0C7W0 189 aa17.09■□□□□ 0.33
XRCC1-201ENST00000262887 PTPAQ15257 358 aa17.09■□□□□ 0.33
XRCC1-201ENST00000262887 CCDC102AQ96A19 550 aa17.09■□□□□ 0.33
XRCC1-201ENST00000262887 AIFM3Q96NN9 605 aa17.09■□□□□ 0.33
XRCC1-201ENST00000262887 ALG1Q9BT22 464 aa17.09■□□□□ 0.33
XRCC1-201ENST00000262887 TUBB2AQ13885 445 aa17.09■□□□□ 0.33
XRCC1-201ENST00000262887 WWC2Q6AWC2 1192 aa17.09■□□□□ 0.33
XRCC1-201ENST00000262887 LMBR1LQ6UX01 489 aa17.09■□□□□ 0.33
XRCC1-201ENST00000262887 RALYLQ86SE5 291 aaKnown RBP17.09■□□□□ 0.33
XRCC1-201ENST00000262887 TICAM2Q86XR7 235 aa17.09■□□□□ 0.33
XRCC1-201ENST00000262887 TUBB2BQ9BVA1 445 aa17.09■□□□□ 0.33
XRCC1-201ENST00000262887 RAI14Q9P0K7 980 aa17.09■□□□□ 0.33
XRCC1-201ENST00000262887 TBX22Q9Y458 520 aa17.09■□□□□ 0.33
XRCC1-201ENST00000262887 SOWAHDA6NJG2 315 aa17.08■□□□□ 0.33
XRCC1-201ENST00000262887 CORO7P57737 925 aa17.08■□□□□ 0.33
XRCC1-201ENST00000262887 CASP8Q14790 479 aa17.08■□□□□ 0.33
XRCC1-201ENST00000262887 LRRC31Q6UY01 552 aa17.08■□□□□ 0.33
XRCC1-201ENST00000262887 MB21D2Q8IYB1 491 aaPredicted RBP17.08■□□□□ 0.33
XRCC1-201ENST00000262887 OSBP2Q969R2 916 aa17.08■□□□□ 0.33
XRCC1-201ENST00000262887 HOOK1Q9UJC3 728 aaKnown RBP17.08■□□□□ 0.33
XRCC1-201ENST00000262887 NFAT5O94916 1531 aa17.08■□□□□ 0.33
XRCC1-201ENST00000262887 ATP5J2-PTCD1G3V325 749 aa17.08■□□□□ 0.32
XRCC1-201ENST00000262887 FOXN1O15353 648 aa17.08■□□□□ 0.32
XRCC1-201ENST00000262887 PTCD1O75127 700 aaKnown RBP17.08■□□□□ 0.32
XRCC1-201ENST00000262887 ZNF18P17022 549 aa17.08■□□□□ 0.32
XRCC1-201ENST00000262887 ZNF790Q6PG37 636 aa17.08■□□□□ 0.32
XRCC1-201ENST00000262887 TRMT44Q8IYL2 757 aaKnown RBP17.08■□□□□ 0.32
XRCC1-201ENST00000262887 GBP3Q9H0R5 595 aa17.08■□□□□ 0.32
XRCC1-201ENST00000262887 FMR1Q06787 632 aaKnown RBP eCLIP17.07■□□□□ 0.32
XRCC1-201ENST00000262887 NCOA7Q8NI08 942 aa17.07■□□□□ 0.32
XRCC1-201ENST00000262887 AKR1B15C9JRZ8 316 aaPredicted RBP17.07■□□□□ 0.32
XRCC1-201ENST00000262887 RHOXF2BP0C7M4 288 aa17.07■□□□□ 0.32
XRCC1-201ENST00000262887 PIP4K2AP48426 406 aaPredicted RBP17.07■□□□□ 0.32
XRCC1-201ENST00000262887 ANTXR2P58335 489 aa17.07■□□□□ 0.32
XRCC1-201ENST00000262887 KRT40Q6A162 431 aa17.07■□□□□ 0.32
XRCC1-201ENST00000262887 PANX2Q96RD6 677 aa17.07■□□□□ 0.32
XRCC1-201ENST00000262887 MAP3K14Q99558 947 aa17.07■□□□□ 0.32
XRCC1-201ENST00000262887 RHOXF2Q9BQY4 288 aa17.07■□□□□ 0.32
XRCC1-201ENST00000262887 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.07■□□□□ 0.32
XRCC1-201ENST00000262887 ACBD3Q9H3P7 528 aa17.07■□□□□ 0.32
XRCC1-201ENST00000262887 DACH1Q9UI36 760 aa17.07■□□□□ 0.32
XRCC1-201ENST00000262887 ADGRG1Q9Y653 693 aa17.07■□□□□ 0.32
XRCC1-201ENST00000262887 PHACTR2O75167 634 aa17.06■□□□□ 0.32
XRCC1-201ENST00000262887 VSNL1P62760 191 aa17.06■□□□□ 0.32
XRCC1-201ENST00000262887 KIF4BQ2VIQ3 1234 aa17.06■□□□□ 0.32
XRCC1-201ENST00000262887 ARHGEF25Q86VW2 580 aa17.06■□□□□ 0.32
XRCC1-201ENST00000262887 MAN1B1Q9UKM7 699 aa17.06■□□□□ 0.32
XRCC1-201ENST00000262887 WASHC4Q2M389 1173 aa17.06■□□□□ 0.32
XRCC1-201ENST00000262887 ZNF569Q5MCW4 686 aa17.06■□□□□ 0.32
XRCC1-201ENST00000262887 NUTM2AQ8IVF1 878 aaPredicted RBP17.06■□□□□ 0.32
XRCC1-201ENST00000262887 KCNH5Q8NCM2 988 aa17.06■□□□□ 0.32
XRCC1-201ENST00000262887 ENOX1Q8TC92 643 aaKnown RBP17.06■□□□□ 0.32
XRCC1-201ENST00000262887 KCNG1Q9UIX4 513 aa17.06■□□□□ 0.32
XRCC1-201ENST00000262887 FER1L4A9Z1Z3 1794 aa17.06■□□□□ 0.32
XRCC1-201ENST00000262887 FGAP02671 866 aa17.06■□□□□ 0.32
XRCC1-201ENST00000262887 TTC39AQ5SRH9 613 aa17.06■□□□□ 0.32
XRCC1-201ENST00000262887 ATG9AQ7Z3C6 839 aa17.06■□□□□ 0.32
XRCC1-201ENST00000262887 MLKLQ8NB16 471 aa17.06■□□□□ 0.32
XRCC1-201ENST00000262887 MED4Q9NPJ6 270 aa17.06■□□□□ 0.32
XRCC1-201ENST00000262887 TOMM22Q9NS69 142 aa17.06■□□□□ 0.32
XRCC1-201ENST00000262887 CTAGE9A4FU28 777 aa17.05■□□□□ 0.32
XRCC1-201ENST00000262887 POSTNQ15063 836 aa17.05■□□□□ 0.32
XRCC1-201ENST00000262887 ZNF827Q17R98 1081 aa17.05■□□□□ 0.32
XRCC1-201ENST00000262887 SPECC1Q5M775 1068 aa17.05■□□□□ 0.32
XRCC1-201ENST00000262887 RAD9BQ6WBX8 426 aa17.05■□□□□ 0.32
XRCC1-201ENST00000262887 NAA15Q9BXJ9 866 aaKnown RBP17.05■□□□□ 0.32
XRCC1-201ENST00000262887 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.05■□□□□ 0.32
XRCC1-201ENST00000262887 BCCIPQ9P287 314 aaKnown RBP eCLIP17.05■□□□□ 0.32
XRCC1-201ENST00000262887 A0A0U1RQJ8 604 aa17.05■□□□□ 0.32
XRCC1-201ENST00000262887 FKBP4Q02790 459 aaKnown RBP eCLIP17.05■□□□□ 0.32
XRCC1-201ENST00000262887 ATRIPQ8WXE1 791 aa17.05■□□□□ 0.32
XRCC1-201ENST00000262887 TEX13AQ9BXU3 409 aaPredicted RBP17.05■□□□□ 0.32
XRCC1-201ENST00000262887 FAM204AQ9H8W3 233 aa17.05■□□□□ 0.32
XRCC1-201ENST00000262887 SAMSN1Q9NSI8 373 aaKnown RBP17.05■□□□□ 0.32
XRCC1-201ENST00000262887 PHF8Q9UPP1 1060 aa17.05■□□□□ 0.32
XRCC1-201ENST00000262887 FOXP2O15409 715 aa17.04■□□□□ 0.32
XRCC1-201ENST00000262887 CDKL5O76039 1030 aa17.04■□□□□ 0.32
XRCC1-201ENST00000262887 TUBBP07437 444 aa17.04■□□□□ 0.32
XRCC1-201ENST00000262887 ATP2B1P20020 1258 aa17.04■□□□□ 0.32
XRCC1-201ENST00000262887 METAP2P50579 478 aaKnown RBP eCLIP17.04■□□□□ 0.32
XRCC1-201ENST00000262887 HSPA2P54652 639 aa17.04■□□□□ 0.32
XRCC1-201ENST00000262887 MDM2Q00987 491 aaPredicted RBP17.04■□□□□ 0.32
XRCC1-201ENST00000262887 NR1I3Q14994 352 aa17.04■□□□□ 0.32
XRCC1-201ENST00000262887 GPR108Q9NPR9 543 aa17.04■□□□□ 0.32
XRCC1-201ENST00000262887 CTAGE15A4D2H0 777 aa17.04■□□□□ 0.32
XRCC1-201ENST00000262887 CTAGE8P0CG41 777 aa17.04■□□□□ 0.32
XRCC1-201ENST00000262887 CTAGE6Q86UF2 777 aa17.04■□□□□ 0.32
XRCC1-201ENST00000262887 PPFIBP1Q86W92 1011 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms