RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 CDKL5O76039 1030 aa19.33■□□□□ 0.68
PDE4C-201ENST00000262805 PUM3Q15397 648 aaKnown RBP19.33■□□□□ 0.68
PDE4C-201ENST00000262805 SPECC1Q5M775 1068 aa19.33■□□□□ 0.68
PDE4C-201ENST00000262805 SPATA5Q8NB90 893 aa19.33■□□□□ 0.68
PDE4C-201ENST00000262805 SLC26A6Q9BXS9 759 aa19.33■□□□□ 0.68
PDE4C-201ENST00000262805 IMPACTQ9P2X3 320 aa19.33■□□□□ 0.68
PDE4C-201ENST00000262805 TUBE1Q9UJT0 475 aa19.33■□□□□ 0.68
PDE4C-201ENST00000262805 ZSCAN20P17040 1043 aaPredicted RBP19.32■□□□□ 0.68
PDE4C-201ENST00000262805 FANCCQ00597 558 aa19.32■□□□□ 0.68
PDE4C-201ENST00000262805 DZIP3Q86Y13 1208 aaKnown RBP19.32■□□□□ 0.68
PDE4C-201ENST00000262805 TMEM87BQ96K49 555 aa19.32■□□□□ 0.68
PDE4C-201ENST00000262805 ZKSCAN3Q9BRR0 538 aa19.32■□□□□ 0.68
PDE4C-201ENST00000262805 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.32■□□□□ 0.68
PDE4C-201ENST00000262805 BCL9O00512 1426 aa19.32■□□□□ 0.68
PDE4C-201ENST00000262805 PPP6R2O75170 966 aa19.32■□□□□ 0.68
PDE4C-201ENST00000262805 SYCP1Q15431 976 aa19.32■□□□□ 0.68
PDE4C-201ENST00000262805 LONRF3Q496Y0 759 aa19.32■□□□□ 0.68
PDE4C-201ENST00000262805 SGMS1Q86VZ5 419 aa19.32■□□□□ 0.68
PDE4C-201ENST00000262805 METTL16Q86W50 562 aaKnown RBP19.32■□□□□ 0.68
PDE4C-201ENST00000262805 FOXP4Q8IVH2 680 aaPredicted RBP19.32■□□□□ 0.68
PDE4C-201ENST00000262805 LPIN2Q92539 896 aa19.32■□□□□ 0.68
PDE4C-201ENST00000262805 SEC31BQ9NQW1 1179 aa19.32■□□□□ 0.68
PDE4C-201ENST00000262805 IFIT3O14879 490 aaKnown RBP19.31■□□□□ 0.68
PDE4C-201ENST00000262805 FOXN1O15353 648 aa19.31■□□□□ 0.68
PDE4C-201ENST00000262805 RESP18Q5W5W9 173 aa19.31■□□□□ 0.68
PDE4C-201ENST00000262805 CMTR1Q8N1G2 835 aaKnown RBP19.31■□□□□ 0.68
PDE4C-201ENST00000262805 NAPBQ9H115 298 aa19.31■□□□□ 0.68
PDE4C-201ENST00000262805 AHDC1Q5TGY3 1603 aaPredicted RBP19.31■□□□□ 0.68
PDE4C-201ENST00000262805 LRP5O75197 1615 aa19.31■□□□□ 0.68
PDE4C-201ENST00000262805 PATL2C9JE40 543 aaKnown RBP19.31■□□□□ 0.68
PDE4C-201ENST00000262805 UQCRFS1P1P0C7P4 283 aa19.31■□□□□ 0.68
PDE4C-201ENST00000262805 GRIN1Q05586 938 aa19.31■□□□□ 0.68
PDE4C-201ENST00000262805 TIGD1Q96MW7 591 aa19.31■□□□□ 0.68
PDE4C-201ENST00000262805 GSG1L2A8MUP6 293 aa19.3■□□□□ 0.68
PDE4C-201ENST00000262805 PIP4K2BP78356 416 aa19.3■□□□□ 0.68
PDE4C-201ENST00000262805 CPLX2Q6PUV4 134 aaKnown RBP19.3■□□□□ 0.68
PDE4C-201ENST00000262805 PPP1R13BQ96KQ4 1090 aa19.3■□□□□ 0.68
PDE4C-201ENST00000262805 KCND1Q9NSA2 647 aa19.3■□□□□ 0.68
PDE4C-201ENST00000262805 KCNJ14Q9UNX9 436 aa19.3■□□□□ 0.68
PDE4C-201ENST00000262805 SLC12A7Q9Y666 1083 aa19.3■□□□□ 0.68
PDE4C-201ENST00000262805 DOCK2Q92608 1830 aa19.3■□□□□ 0.68
PDE4C-201ENST00000262805 BTBD18B2RXH4 712 aa19.3■□□□□ 0.68
PDE4C-201ENST00000262805 RRP12Q5JTH9 1297 aaKnown RBP19.3■□□□□ 0.68
PDE4C-201ENST00000262805 LCORLQ8N3X6 602 aa19.3■□□□□ 0.68
PDE4C-201ENST00000262805 CCDC82Q8N4S0 544 aa19.3■□□□□ 0.68
PDE4C-201ENST00000262805 ARAP2Q8WZ64 1704 aa19.3■□□□□ 0.68
PDE4C-201ENST00000262805 BMP6P22004 513 aa19.29■□□□□ 0.68
PDE4C-201ENST00000262805 SFPQP23246 707 aaKnown RBP eCLIP19.29■□□□□ 0.68
PDE4C-201ENST00000262805 GOLGA8FQ08AF8 430 aa19.29■□□□□ 0.68
PDE4C-201ENST00000262805 GOLGA8DPQ0D2H9 430 aa19.29■□□□□ 0.68
PDE4C-201ENST00000262805 ALX1Q15699 326 aa19.29■□□□□ 0.68
PDE4C-201ENST00000262805 ZNF34Q8IZ26 560 aa19.29■□□□□ 0.68
PDE4C-201ENST00000262805 IKBKBO14920 756 aa19.29■□□□□ 0.68
PDE4C-201ENST00000262805 TOB1P50616 345 aaPredicted RBP19.29■□□□□ 0.68
PDE4C-201ENST00000262805 SUSD4Q5VX71 490 aa19.29■□□□□ 0.68
PDE4C-201ENST00000262805 CCDC150Q8NCX0 1101 aa19.29■□□□□ 0.68
PDE4C-201ENST00000262805 FAM237AA0A1B0GTK4 181 aa19.28■□□□□ 0.68
PDE4C-201ENST00000262805 SMIM22K7EJ46 135 aa19.28■□□□□ 0.68
PDE4C-201ENST00000262805 LIFRP42702 1097 aa19.28■□□□□ 0.68
PDE4C-201ENST00000262805 PDE4BQ07343 736 aa19.28■□□□□ 0.68
PDE4C-201ENST00000262805 SSRP1Q08945 709 aaKnown RBP19.28■□□□□ 0.68
PDE4C-201ENST00000262805 TRIM29Q14134 588 aa19.28■□□□□ 0.68
PDE4C-201ENST00000262805 JMYQ8N9B5 988 aa19.28■□□□□ 0.68
PDE4C-201ENST00000262805 MROH5Q6ZUA9 1318 aa19.28■□□□□ 0.68
PDE4C-201ENST00000262805 FMNL1O95466 1100 aaPredicted RBP19.28■□□□□ 0.68
PDE4C-201ENST00000262805 BCAMP50895 628 aa19.28■□□□□ 0.68
PDE4C-201ENST00000262805 HSP90AA4PQ58FG1 418 aa19.28■□□□□ 0.68
PDE4C-201ENST00000262805 AKNAD1Q5T1N1 836 aa19.28■□□□□ 0.68
PDE4C-201ENST00000262805 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.28■□□□□ 0.68
PDE4C-201ENST00000262805 TOMM22Q9NS69 142 aa19.28■□□□□ 0.68
PDE4C-201ENST00000262805 KCNH3Q9ULD8 1083 aa19.28■□□□□ 0.68
PDE4C-201ENST00000262805 PCDHA5Q9Y5H7 936 aa19.28■□□□□ 0.68
PDE4C-201ENST00000262805 TMEM232C9JQI7 657 aa19.27■□□□□ 0.68
PDE4C-201ENST00000262805 TPM4P67936 248 aa19.27■□□□□ 0.68
PDE4C-201ENST00000262805 KRBA2Q6ZNG9 492 aa19.27■□□□□ 0.68
PDE4C-201ENST00000262805 MIGA1Q8NAN2 632 aa19.27■□□□□ 0.68
PDE4C-201ENST00000262805 LRRN4CLQ8ND94 238 aa19.27■□□□□ 0.68
PDE4C-201ENST00000262805 RGS22Q8NE09 1264 aa19.27■□□□□ 0.68
PDE4C-201ENST00000262805 KIF18AQ8NI77 898 aa19.27■□□□□ 0.68
PDE4C-201ENST00000262805 SLC5A1P13866 664 aa19.27■□□□□ 0.67
PDE4C-201ENST00000262805 MYL5Q02045 173 aa19.27■□□□□ 0.67
PDE4C-201ENST00000262805 MAP3K12Q12852 859 aa19.27■□□□□ 0.67
PDE4C-201ENST00000262805 NOSTRINQ8IVI9 506 aa19.27■□□□□ 0.67
PDE4C-201ENST00000262805 CUTAO60888 179 aa19.26■□□□□ 0.67
PDE4C-201ENST00000262805 UBASH3AP57075 661 aa19.26■□□□□ 0.67
PDE4C-201ENST00000262805 SYT10Q6XYQ8 523 aa19.26■□□□□ 0.67
PDE4C-201ENST00000262805 CNNM3Q8NE01 707 aa19.26■□□□□ 0.67
PDE4C-201ENST00000262805 FANCLQ9NW38 375 aa19.26■□□□□ 0.67
PDE4C-201ENST00000262805 DISP2A7MBM2 1401 aa19.26■□□□□ 0.67
PDE4C-201ENST00000262805 ERVV-1B6SEH8 477 aa19.26■□□□□ 0.67
PDE4C-201ENST00000262805 MMP1P03956 469 aa19.26■□□□□ 0.67
PDE4C-201ENST00000262805 IFNAR1P17181 557 aa19.26■□□□□ 0.67
PDE4C-201ENST00000262805 NR5A1Q13285 461 aa19.26■□□□□ 0.67
PDE4C-201ENST00000262805 ELF2Q15723 593 aa19.26■□□□□ 0.67
PDE4C-201ENST00000262805 MFSD6Q6ZSS7 791 aa19.26■□□□□ 0.67
PDE4C-201ENST00000262805 DIS3L2Q8IYB7 885 aaKnown RBP19.26■□□□□ 0.67
PDE4C-201ENST00000262805 IQSEC3Q9UPP2 1182 aaPredicted RBP19.26■□□□□ 0.67
PDE4C-201ENST00000262805 SLC4A4Q9Y6R1 1079 aa19.26■□□□□ 0.67
PDE4C-201ENST00000262805 TIAM2Q8IVF5 1701 aa19.26■□□□□ 0.67
PDE4C-201ENST00000262805 COL4A1P02462 1669 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms