RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 KIF2AO00139 706 aaPredicted RBP17.59■□□□□ 0.41
DDX56-201ENST00000258772 SFPQP23246 707 aaKnown RBP eCLIP17.59■□□□□ 0.41
DDX56-201ENST00000258772 CTDSPL2Q05D32 466 aa17.59■□□□□ 0.41
DDX56-201ENST00000258772 DHX8Q14562 1220 aaKnown RBP17.59■□□□□ 0.41
DDX56-201ENST00000258772 FEZ1Q99689 392 aa17.59■□□□□ 0.41
DDX56-201ENST00000258772 NAPBQ9H115 298 aa17.59■□□□□ 0.41
DDX56-201ENST00000258772 SLC12A7Q9Y666 1083 aa17.59■□□□□ 0.41
DDX56-201ENST00000258772 IFIT3O14879 490 aaKnown RBP17.59■□□□□ 0.41
DDX56-201ENST00000258772 SSRP1Q08945 709 aaKnown RBP17.59■□□□□ 0.41
DDX56-201ENST00000258772 PNOCQ13519 176 aa17.59■□□□□ 0.41
DDX56-201ENST00000258772 MAGEB6Q8N7X4 407 aa17.59■□□□□ 0.41
DDX56-201ENST00000258772 CGNQ9P2M7 1197 aaKnown RBP17.59■□□□□ 0.41
DDX56-201ENST00000258772 STK36Q9NRP7 1315 aa17.58■□□□□ 0.41
DDX56-201ENST00000258772 UBE2Q2LH0YL09 131 aa17.58■□□□□ 0.41
DDX56-201ENST00000258772 CUTAO60888 179 aa17.58■□□□□ 0.41
DDX56-201ENST00000258772 ATP1A3P13637 1013 aa17.58■□□□□ 0.41
DDX56-201ENST00000258772 ZSCAN20P17040 1043 aaPredicted RBP17.58■□□□□ 0.41
DDX56-201ENST00000258772 MAP3K12Q12852 859 aa17.58■□□□□ 0.41
DDX56-201ENST00000258772 DZIP3Q86Y13 1208 aaKnown RBP17.58■□□□□ 0.41
DDX56-201ENST00000258772 ZNF34Q8IZ26 560 aa17.58■□□□□ 0.41
DDX56-201ENST00000258772 SLC26A6Q9BXS9 759 aa17.58■□□□□ 0.41
DDX56-201ENST00000258772 ZNF215Q9UL58 517 aaPredicted RBP17.58■□□□□ 0.41
DDX56-201ENST00000258772 TACC3Q9Y6A5 838 aa17.58■□□□□ 0.41
DDX56-201ENST00000258772 BCL9O00512 1426 aa17.58■□□□□ 0.4
DDX56-201ENST00000258772 PSDA5PKW4 1024 aaPredicted RBP17.58■□□□□ 0.4
DDX56-201ENST00000258772 MBD4O95243 580 aa17.58■□□□□ 0.4
DDX56-201ENST00000258772 SLC5A1P13866 664 aa17.58■□□□□ 0.4
DDX56-201ENST00000258772 KCNJ6P48051 423 aa17.58■□□□□ 0.4
DDX56-201ENST00000258772 PRDM4Q9UKN5 801 aa17.58■□□□□ 0.4
DDX56-201ENST00000258772 RASGRF1Q13972 1273 aa17.57■□□□□ 0.4
DDX56-201ENST00000258772 AKNAD1Q5T1N1 836 aa17.57■□□□□ 0.4
DDX56-201ENST00000258772 PKNOX2Q96KN3 472 aa17.57■□□□□ 0.4
DDX56-201ENST00000258772 CNNM2Q9H8M5 875 aa17.57■□□□□ 0.4
DDX56-201ENST00000258772 ARMT1Q9H993 441 aa17.57■□□□□ 0.4
DDX56-201ENST00000258772 GSG1L2A8MUP6 293 aa17.56■□□□□ 0.4
DDX56-201ENST00000258772 SNAP23O00161 211 aa17.56■□□□□ 0.4
DDX56-201ENST00000258772 FMNL1O95466 1100 aaPredicted RBP17.56■□□□□ 0.4
DDX56-201ENST00000258772 IFNAR1P17181 557 aa17.56■□□□□ 0.4
DDX56-201ENST00000258772 IL6STP40189 918 aaPredicted RBP17.56■□□□□ 0.4
DDX56-201ENST00000258772 LONRF3Q496Y0 759 aa17.56■□□□□ 0.4
DDX56-201ENST00000258772 METTL16Q86W50 562 aaKnown RBP17.56■□□□□ 0.4
DDX56-201ENST00000258772 BTG4Q9NY30 223 aa17.56■□□□□ 0.4
DDX56-201ENST00000258772 ARAP2Q8WZ64 1704 aa17.56■□□□□ 0.4
DDX56-201ENST00000258772 DOCK2Q92608 1830 aa17.56■□□□□ 0.4
DDX56-201ENST00000258772 NRDCO43847 1150 aa17.56■□□□□ 0.4
DDX56-201ENST00000258772 MYL5Q02045 173 aa17.56■□□□□ 0.4
DDX56-201ENST00000258772 KRBA2Q6ZNG9 492 aa17.56■□□□□ 0.4
DDX56-201ENST00000258772 MFSD6Q6ZSS7 791 aa17.56■□□□□ 0.4
DDX56-201ENST00000258772 FOXP4Q8IVH2 680 aaPredicted RBP17.56■□□□□ 0.4
DDX56-201ENST00000258772 PPP1R13BQ96KQ4 1090 aa17.56■□□□□ 0.4
DDX56-201ENST00000258772 KRT23Q9C075 422 aa17.56■□□□□ 0.4
DDX56-201ENST00000258772 KCNH3Q9ULD8 1083 aa17.56■□□□□ 0.4
DDX56-201ENST00000258772 UBASH3AP57075 661 aa17.55■□□□□ 0.4
DDX56-201ENST00000258772 NOSTRINQ8IVI9 506 aa17.55■□□□□ 0.4
DDX56-201ENST00000258772 CNNM3Q8NE01 707 aa17.55■□□□□ 0.4
DDX56-201ENST00000258772 WASF1Q92558 559 aa17.55■□□□□ 0.4
DDX56-201ENST00000258772 AK7Q96M32 723 aa17.55■□□□□ 0.4
DDX56-201ENST00000258772 BCL11BQ9C0K0 894 aaPredicted RBP17.55■□□□□ 0.4
DDX56-201ENST00000258772 BTBD18B2RXH4 712 aa17.55■□□□□ 0.4
DDX56-201ENST00000258772 KRI1Q8N9T8 703 aaKnown RBP17.55■□□□□ 0.4
DDX56-201ENST00000258772 ERO1AQ96HE7 468 aa17.55■□□□□ 0.4
DDX56-201ENST00000258772 OGFRQ9NZT2 677 aa17.55■□□□□ 0.4
DDX56-201ENST00000258772 PCDHA5Q9Y5H7 936 aa17.55■□□□□ 0.4
DDX56-201ENST00000258772 LRP5O75197 1615 aa17.55■□□□□ 0.4
DDX56-201ENST00000258772 NID2Q14112 1375 aa17.54■□□□□ 0.4
DDX56-201ENST00000258772 PRKAB2O43741 272 aa17.54■□□□□ 0.4
DDX56-201ENST00000258772 MMP1P03956 469 aa17.54■□□□□ 0.4
DDX56-201ENST00000258772 GUCY1A2P33402 732 aa17.54■□□□□ 0.4
DDX56-201ENST00000258772 OLFM4Q6UX06 510 aa17.54■□□□□ 0.4
DDX56-201ENST00000258772 DPF2Q92785 391 aa17.54■□□□□ 0.4
DDX56-201ENST00000258772 MPHOSPH8Q99549 860 aa17.54■□□□□ 0.4
DDX56-201ENST00000258772 CBFA2T2O43439 604 aa17.54■□□□□ 0.4
DDX56-201ENST00000258772 SLU7O95391 586 aaKnown RBP17.54■□□□□ 0.4
DDX56-201ENST00000258772 SERPINC1P01008 464 aa17.54■□□□□ 0.4
DDX56-201ENST00000258772 DMTNQ08495 405 aa17.54■□□□□ 0.4
DDX56-201ENST00000258772 ELOA2Q8IYF1 753 aaPredicted RBP17.54■□□□□ 0.4
DDX56-201ENST00000258772 STK11IPQ8N1F8 1099 aa17.54■□□□□ 0.4
DDX56-201ENST00000258772 SYTL4Q96C24 671 aaPredicted RBP17.54■□□□□ 0.4
DDX56-201ENST00000258772 TOB1P50616 345 aaPredicted RBP17.53■□□□□ 0.4
DDX56-201ENST00000258772 MDM2Q00987 491 aaPredicted RBP17.53■□□□□ 0.4
DDX56-201ENST00000258772 SAFBQ15424 915 aaKnown RBP eCLIP17.53■□□□□ 0.4
DDX56-201ENST00000258772 STAG1Q8WVM7 1258 aa17.53■□□□□ 0.4
DDX56-201ENST00000258772 TUBB4AP04350 444 aa17.53■□□□□ 0.4
DDX56-201ENST00000258772 GNAT2P19087 354 aa17.53■□□□□ 0.4
DDX56-201ENST00000258772 RRP12Q5JTH9 1297 aaKnown RBP17.53■□□□□ 0.4
DDX56-201ENST00000258772 UTP14CQ5TAP6 766 aaKnown RBP17.53■□□□□ 0.4
DDX56-201ENST00000258772 SUSD4Q5VX71 490 aa17.53■□□□□ 0.4
DDX56-201ENST00000258772 DIS3L2Q8IYB7 885 aaKnown RBP17.53■□□□□ 0.4
DDX56-201ENST00000258772 TRIM22Q8IYM9 498 aa17.53■□□□□ 0.4
DDX56-201ENST00000258772 LCORLQ8N3X6 602 aa17.53■□□□□ 0.4
DDX56-201ENST00000258772 ZKSCAN3Q9BRR0 538 aa17.53■□□□□ 0.4
DDX56-201ENST00000258772 NACAP1Q9BZK3 213 aa17.53■□□□□ 0.4
DDX56-201ENST00000258772 SEC31BQ9NQW1 1179 aa17.53■□□□□ 0.4
DDX56-201ENST00000258772 SLIT2O94813 1529 aa17.52■□□□□ 0.4
DDX56-201ENST00000258772 TIAM2Q8IVF5 1701 aa17.52■□□□□ 0.4
DDX56-201ENST00000258772 MYO1BO43795 1136 aa17.52■□□□□ 0.4
DDX56-201ENST00000258772 TDO2P48775 406 aa17.52■□□□□ 0.4
DDX56-201ENST00000258772 WTAPQ15007 396 aa17.52■□□□□ 0.4
DDX56-201ENST00000258772 SART3Q15020 963 aaKnown RBP17.52■□□□□ 0.4
DDX56-201ENST00000258772 RTN1Q16799 776 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms