RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 ADGRA1Q86SQ6 560 aa19.46■□□□□ 0.71
SSPN-201ENST00000242729 FBXL16Q8N461 479 aa19.46■□□□□ 0.71
SSPN-201ENST00000242729 MYH15Q9Y2K3 1946 aa19.46■□□□□ 0.71
SSPN-201ENST00000242729 NLRP12P59046 1061 aa19.45■□□□□ 0.7
SSPN-201ENST00000242729 MAP3K12Q12852 859 aa19.45■□□□□ 0.7
SSPN-201ENST00000242729 CPLX2Q6PUV4 134 aaKnown RBP19.45■□□□□ 0.7
SSPN-201ENST00000242729 MFSD6Q6ZSS7 791 aa19.45■□□□□ 0.7
SSPN-201ENST00000242729 FOXP4Q8IVH2 680 aaPredicted RBP19.45■□□□□ 0.7
SSPN-201ENST00000242729 ZNF215Q9UL58 517 aaPredicted RBP19.45■□□□□ 0.7
SSPN-201ENST00000242729 JAG2Q9Y219 1238 aa19.45■□□□□ 0.7
SSPN-201ENST00000242729 CDHR2Q9BYE9 1310 aa19.45■□□□□ 0.7
SSPN-201ENST00000242729 TMEM232C9JQI7 657 aa19.45■□□□□ 0.7
SSPN-201ENST00000242729 FAM177A1Q8N128 213 aaPredicted RBP19.45■□□□□ 0.7
SSPN-201ENST00000242729 OXER1Q8TDS5 423 aa19.45■□□□□ 0.7
SSPN-201ENST00000242729 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.45■□□□□ 0.7
SSPN-201ENST00000242729 FAM205CA6NFA0 338 aa19.44■□□□□ 0.7
SSPN-201ENST00000242729 PATL2C9JE40 543 aaKnown RBP19.44■□□□□ 0.7
SSPN-201ENST00000242729 SERPINC1P01008 464 aa19.44■□□□□ 0.7
SSPN-201ENST00000242729 SLC5A1P13866 664 aa19.44■□□□□ 0.7
SSPN-201ENST00000242729 ATP6V1AP38606 617 aa19.44■□□□□ 0.7
SSPN-201ENST00000242729 GYG1P46976 350 aa19.44■□□□□ 0.7
SSPN-201ENST00000242729 SSRP1Q08945 709 aaKnown RBP19.44■□□□□ 0.7
SSPN-201ENST00000242729 PTPAQ15257 358 aa19.44■□□□□ 0.7
SSPN-201ENST00000242729 CCAR2Q8N163 923 aaKnown RBP19.44■□□□□ 0.7
SSPN-201ENST00000242729 KLHL34Q8N239 644 aa19.44■□□□□ 0.7
SSPN-201ENST00000242729 AKAP11Q9UKA4 1901 aa19.44■□□□□ 0.7
SSPN-201ENST00000242729 ARID4AP29374 1257 aaPredicted RBP19.44■□□□□ 0.7
SSPN-201ENST00000242729 FANCCQ00597 558 aa19.44■□□□□ 0.7
SSPN-201ENST00000242729 USP49Q70CQ1 688 aa19.44■□□□□ 0.7
SSPN-201ENST00000242729 TRMT44Q8IYL2 757 aaKnown RBP19.44■□□□□ 0.7
SSPN-201ENST00000242729 CTIFO43310 598 aaKnown RBP19.44■□□□□ 0.7
SSPN-201ENST00000242729 PDE4BQ07343 736 aa19.44■□□□□ 0.7
SSPN-201ENST00000242729 CFAP100Q494V2 611 aa19.44■□□□□ 0.7
SSPN-201ENST00000242729 METTL16Q86W50 562 aaKnown RBP19.44■□□□□ 0.7
SSPN-201ENST00000242729 DIS3L2Q8IYB7 885 aaKnown RBP19.44■□□□□ 0.7
SSPN-201ENST00000242729 LRRN4CLQ8ND94 238 aa19.44■□□□□ 0.7
SSPN-201ENST00000242729 CNNM3Q8NE01 707 aa19.44■□□□□ 0.7
SSPN-201ENST00000242729 MAP3K14Q99558 947 aa19.44■□□□□ 0.7
SSPN-201ENST00000242729 NIP7Q9Y221 180 aaKnown RBP eCLIP19.44■□□□□ 0.7
SSPN-201ENST00000242729 FANCLQ9NW38 375 aa19.43■□□□□ 0.7
SSPN-201ENST00000242729 PCDHA5Q9Y5H7 936 aa19.43■□□□□ 0.7
SSPN-201ENST00000242729 ABCC6O95255 1503 aa19.43■□□□□ 0.7
SSPN-201ENST00000242729 CDKL5O76039 1030 aa19.43■□□□□ 0.7
SSPN-201ENST00000242729 AKNAD1Q5T1N1 836 aa19.43■□□□□ 0.7
SSPN-201ENST00000242729 E4F1Q66K89 784 aaPredicted RBP19.43■□□□□ 0.7
SSPN-201ENST00000242729 SHANK3Q9BYB0 1731 aa19.43■□□□□ 0.7
SSPN-201ENST00000242729 UQCRFS1P1P0C7P4 283 aa19.42■□□□□ 0.7
SSPN-201ENST00000242729 FGFR2P21802 821 aa19.42■□□□□ 0.7
SSPN-201ENST00000242729 SFPQP23246 707 aaKnown RBP eCLIP19.42■□□□□ 0.7
SSPN-201ENST00000242729 CASP1P29466 404 aa19.42■□□□□ 0.7
SSPN-201ENST00000242729 SYT10Q6XYQ8 523 aa19.42■□□□□ 0.7
SSPN-201ENST00000242729 HSD3B7Q9H2F3 369 aa19.42■□□□□ 0.7
SSPN-201ENST00000242729 RAI14Q9P0K7 980 aa19.42■□□□□ 0.7
SSPN-201ENST00000242729 ZHX1Q9UKY1 873 aaPredicted RBP19.42■□□□□ 0.7
SSPN-201ENST00000242729 KCNH3Q9ULD8 1083 aa19.42■□□□□ 0.7
SSPN-201ENST00000242729 PCDHB6Q9Y5E3 794 aa19.42■□□□□ 0.7
SSPN-201ENST00000242729 COBLO75128 1261 aa19.42■□□□□ 0.7
SSPN-201ENST00000242729 PRR29P0C7W0 189 aa19.42■□□□□ 0.7
SSPN-201ENST00000242729 ANKRD7Q92527 254 aa19.42■□□□□ 0.7
SSPN-201ENST00000242729 BAZ2BQ9UIF8 2168 aaKnown RBP19.41■□□□□ 0.7
SSPN-201ENST00000242729 CYP7A1P22680 504 aa19.41■□□□□ 0.7
SSPN-201ENST00000242729 CRKLP46109 303 aaKnown RBP19.41■□□□□ 0.7
SSPN-201ENST00000242729 TOB1P50616 345 aaPredicted RBP19.41■□□□□ 0.7
SSPN-201ENST00000242729 RBM6P78332 1123 aaKnown RBP19.41■□□□□ 0.7
SSPN-201ENST00000242729 WTAPQ15007 396 aa19.41■□□□□ 0.7
SSPN-201ENST00000242729 ZNF34Q8IZ26 560 aa19.41■□□□□ 0.7
SSPN-201ENST00000242729 POLR2DO15514 142 aaKnown RBP19.41■□□□□ 0.7
SSPN-201ENST00000242729 BMP6P22004 513 aa19.41■□□□□ 0.7
SSPN-201ENST00000242729 UBASH3AP57075 661 aa19.41■□□□□ 0.7
SSPN-201ENST00000242729 C3orf67Q6ZVT6 689 aa19.41■□□□□ 0.7
SSPN-201ENST00000242729 TMEM87BQ96K49 555 aa19.41■□□□□ 0.7
SSPN-201ENST00000242729 BCL9O00512 1426 aa19.4■□□□□ 0.7
SSPN-201ENST00000242729 DYNLL1P63167 89 aaKnown RBP19.4■□□□□ 0.7
SSPN-201ENST00000242729 RTN1Q16799 776 aa19.4■□□□□ 0.7
SSPN-201ENST00000242729 CABP5Q9NP86 173 aa19.4■□□□□ 0.7
SSPN-201ENST00000242729 SLIT2O94813 1529 aa19.4■□□□□ 0.7
SSPN-201ENST00000242729 CHRNDQ07001 517 aa19.4■□□□□ 0.7
SSPN-201ENST00000242729 ELF2Q15723 593 aa19.4■□□□□ 0.7
SSPN-201ENST00000242729 NOSTRINQ8IVI9 506 aa19.4■□□□□ 0.7
SSPN-201ENST00000242729 UTP14AQ9BVJ6 771 aaKnown RBP19.4■□□□□ 0.7
SSPN-201ENST00000242729 MROH5Q6ZUA9 1318 aa19.4■□□□□ 0.7
SSPN-201ENST00000242729 NOM1Q5C9Z4 860 aaKnown RBP19.39■□□□□ 0.7
SSPN-201ENST00000242729 INTS5Q6P9B9 1019 aaKnown RBP19.39■□□□□ 0.7
SSPN-201ENST00000242729 NYAP1Q6ZVC0 841 aa19.39■□□□□ 0.7
SSPN-201ENST00000242729 HOMER1Q86YM7 354 aa19.39■□□□□ 0.7
SSPN-201ENST00000242729 VPS54Q9P1Q0 977 aa19.39■□□□□ 0.7
SSPN-201ENST00000242729 XIRP1Q702N8 1843 aaKnown RBP19.39■□□□□ 0.69
SSPN-201ENST00000242729 PAXBP1Q9Y5B6 917 aa19.39■□□□□ 0.69
SSPN-201ENST00000242729 IL6STP40189 918 aaPredicted RBP19.38■□□□□ 0.69
SSPN-201ENST00000242729 TPM4P67936 248 aa19.38■□□□□ 0.69
SSPN-201ENST00000242729 ITPK1Q13572 414 aa19.38■□□□□ 0.69
SSPN-201ENST00000242729 STAMQ92783 540 aa19.38■□□□□ 0.69
SSPN-201ENST00000242729 PPP1R13BQ96KQ4 1090 aa19.38■□□□□ 0.69
SSPN-201ENST00000242729 SERTAD1Q9UHV2 236 aa19.38■□□□□ 0.69
SSPN-201ENST00000242729 PAPPAQ13219 1627 aa19.38■□□□□ 0.69
SSPN-201ENST00000242729 KCNQ2O43526 872 aa19.38■□□□□ 0.69
SSPN-201ENST00000242729 IGHMBP2P38935 993 aaKnown RBP19.38■□□□□ 0.69
SSPN-201ENST00000242729 RESP18Q5W5W9 173 aa19.38■□□□□ 0.69
SSPN-201ENST00000242729 ERICH2A1L162 156 aa19.38■□□□□ 0.69
SSPN-201ENST00000242729 KRBA2Q6ZNG9 492 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms