RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 GOLGA8FQ08AF8 430 aa16.91■□□□□ 0.3
CNOT3-201ENST00000221232 GOLGA8DPQ0D2H9 430 aa16.91■□□□□ 0.3
CNOT3-201ENST00000221232 LONRF3Q496Y0 759 aa16.91■□□□□ 0.3
CNOT3-201ENST00000221232 INTS5Q6P9B9 1019 aaKnown RBP16.91■□□□□ 0.3
CNOT3-201ENST00000221232 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.91■□□□□ 0.3
CNOT3-201ENST00000221232 NLRP12P59046 1061 aa16.9■□□□□ 0.3
CNOT3-201ENST00000221232 AKNAD1Q5T1N1 836 aa16.9■□□□□ 0.3
CNOT3-201ENST00000221232 PDILTQ8N807 584 aa16.9■□□□□ 0.3
CNOT3-201ENST00000221232 TMEM87BQ96K49 555 aa16.9■□□□□ 0.3
CNOT3-201ENST00000221232 TOGARAM1Q9Y4F4 1720 aa16.9■□□□□ 0.3
CNOT3-201ENST00000221232 CYP2D7A0A087X1C5 515 aa16.9■□□□□ 0.3
CNOT3-201ENST00000221232 CCZ1BP86790 482 aa16.9■□□□□ 0.3
CNOT3-201ENST00000221232 CCZ1P86791 482 aaPredicted RBP16.9■□□□□ 0.3
CNOT3-201ENST00000221232 NR5A1Q13285 461 aa16.9■□□□□ 0.3
CNOT3-201ENST00000221232 CCDC24Q8N4L8 307 aa16.9■□□□□ 0.3
CNOT3-201ENST00000221232 ZNF512BQ96KM6 892 aaPredicted RBP16.9■□□□□ 0.3
CNOT3-201ENST00000221232 ERVV-1B6SEH8 477 aa16.89■□□□□ 0.29
CNOT3-201ENST00000221232 PRDM1O75626 825 aa16.89■□□□□ 0.29
CNOT3-201ENST00000221232 CYP7A1P22680 504 aa16.89■□□□□ 0.29
CNOT3-201ENST00000221232 IGHMBP2P38935 993 aaKnown RBP16.89■□□□□ 0.29
CNOT3-201ENST00000221232 PTPN14Q15678 1187 aa16.89■□□□□ 0.29
CNOT3-201ENST00000221232 ADGRA1Q86SQ6 560 aa16.89■□□□□ 0.29
CNOT3-201ENST00000221232 PDCL2Q8N4E4 241 aa16.89■□□□□ 0.29
CNOT3-201ENST00000221232 CCDC112Q8NEF3 446 aa16.89■□□□□ 0.29
CNOT3-201ENST00000221232 RAI14Q9P0K7 980 aa16.89■□□□□ 0.29
CNOT3-201ENST00000221232 NUTM2BA6NNL0 878 aaPredicted RBP16.89■□□□□ 0.29
CNOT3-201ENST00000221232 NUTM2EB1AL46 878 aaPredicted RBP16.89■□□□□ 0.29
CNOT3-201ENST00000221232 EIF5P55010 431 aaKnown RBP16.89■□□□□ 0.29
CNOT3-201ENST00000221232 CHRNDQ07001 517 aa16.89■□□□□ 0.29
CNOT3-201ENST00000221232 PTPAQ15257 358 aa16.89■□□□□ 0.29
CNOT3-201ENST00000221232 NUTM2AQ8IVF1 878 aaPredicted RBP16.89■□□□□ 0.29
CNOT3-201ENST00000221232 U2AF2P26368 475 aaKnown RBP eCLIP16.88■□□□□ 0.293e-6■■■■□ 20.1
CNOT3-201ENST00000221232 WTAPQ15007 396 aa16.88■□□□□ 0.29
CNOT3-201ENST00000221232 SLC4A8Q2Y0W8 1093 aa16.88■□□□□ 0.29
CNOT3-201ENST00000221232 CCDC87Q9NVE4 849 aa16.88■□□□□ 0.29
CNOT3-201ENST00000221232 ITPK1Q13572 414 aa16.88■□□□□ 0.29
CNOT3-201ENST00000221232 MTERF4Q7Z6M4 381 aaKnown RBP16.88■□□□□ 0.29
CNOT3-201ENST00000221232 FOXP4Q8IVH2 680 aaPredicted RBP16.88■□□□□ 0.29
CNOT3-201ENST00000221232 GRAMD1CQ8IYS0 662 aa16.88■□□□□ 0.29
CNOT3-201ENST00000221232 CNNM3Q8NE01 707 aa16.88■□□□□ 0.29
CNOT3-201ENST00000221232 DPF2Q92785 391 aa16.88■□□□□ 0.29
CNOT3-201ENST00000221232 MAP3K14Q99558 947 aa16.88■□□□□ 0.29
CNOT3-201ENST00000221232 NCAPHQ15003 741 aa16.87■□□□□ 0.29
CNOT3-201ENST00000221232 DIS3L2Q8IYB7 885 aaKnown RBP16.87■□□□□ 0.29
CNOT3-201ENST00000221232 ABCC12Q96J65 1359 aa16.87■□□□□ 0.29
CNOT3-201ENST00000221232 KCNQ2O43526 872 aa16.87■□□□□ 0.29
CNOT3-201ENST00000221232 SERPINC1P01008 464 aa16.87■□□□□ 0.29
CNOT3-201ENST00000221232 RTN1Q16799 776 aa16.87■□□□□ 0.29
CNOT3-201ENST00000221232 CCDC152Q4G0S7 254 aa16.87■□□□□ 0.29
CNOT3-201ENST00000221232 ARMCX5Q6P1M9 558 aa16.87■□□□□ 0.29
CNOT3-201ENST00000221232 OXER1Q8TDS5 423 aa16.87■□□□□ 0.29
CNOT3-201ENST00000221232 NACAP1Q9BZK3 213 aa16.87■□□□□ 0.29
CNOT3-201ENST00000221232 JAG2Q9Y219 1238 aa16.87■□□□□ 0.29
CNOT3-201ENST00000221232 MYO5AQ9Y4I1 1855 aaKnown RBP16.87■□□□□ 0.29
CNOT3-201ENST00000221232 LOC102724428A0A0B4J2F2 783 aa16.87■□□□□ 0.29
CNOT3-201ENST00000221232 ERICH2A1L162 156 aa16.87■□□□□ 0.29
CNOT3-201ENST00000221232 SIK1P57059 783 aa16.87■□□□□ 0.29
CNOT3-201ENST00000221232 FANCCQ00597 558 aa16.87■□□□□ 0.29
CNOT3-201ENST00000221232 DDB1Q16531 1140 aa16.87■□□□□ 0.29
CNOT3-201ENST00000221232 C3orf67Q6ZVT6 689 aa16.87■□□□□ 0.29
CNOT3-201ENST00000221232 CCDC94Q9BW85 323 aaPredicted RBP16.87■□□□□ 0.29
CNOT3-201ENST00000221232 KCNH3Q9ULD8 1083 aa16.87■□□□□ 0.29
CNOT3-201ENST00000221232 WDR19Q8NEZ3 1342 aa16.86■□□□□ 0.29
CNOT3-201ENST00000221232 DYNLL1P63167 89 aaKnown RBP16.86■□□□□ 0.29
CNOT3-201ENST00000221232 ZNF827Q17R98 1081 aa16.86■□□□□ 0.29
CNOT3-201ENST00000221232 PCDHA5Q9Y5H7 936 aa16.86■□□□□ 0.29
CNOT3-201ENST00000221232 SMTNL1A8MU46 457 aa16.86■□□□□ 0.29
CNOT3-201ENST00000221232 RBM6P78332 1123 aaKnown RBP16.86■□□□□ 0.29
CNOT3-201ENST00000221232 EVX2Q03828 476 aa16.86■□□□□ 0.29
CNOT3-201ENST00000221232 SGMS1Q86VZ5 419 aa16.86■□□□□ 0.29
CNOT3-201ENST00000221232 JMYQ8N9B5 988 aa16.86■□□□□ 0.29
CNOT3-201ENST00000221232 PCDHB6Q9Y5E3 794 aa16.86■□□□□ 0.29
CNOT3-201ENST00000221232 SHANK3Q9BYB0 1731 aa16.85■□□□□ 0.29
CNOT3-201ENST00000221232 XIRP1Q702N8 1843 aaKnown RBP16.85■□□□□ 0.29
CNOT3-201ENST00000221232 TOB1P50616 345 aaPredicted RBP16.85■□□□□ 0.29
CNOT3-201ENST00000221232 TPM4P67936 248 aa16.85■□□□□ 0.29
CNOT3-201ENST00000221232 NCBP1Q09161 790 aaKnown RBP16.85■□□□□ 0.29
CNOT3-201ENST00000221232 METTL16Q86W50 562 aaKnown RBP16.85■□□□□ 0.29
CNOT3-201ENST00000221232 CABP5Q9NP86 173 aa16.85■□□□□ 0.29
CNOT3-201ENST00000221232 FAM205CA6NFA0 338 aa16.85■□□□□ 0.29
CNOT3-201ENST00000221232 CAMTA2O94983 1202 aa16.85■□□□□ 0.29
CNOT3-201ENST00000221232 SAFBQ15424 915 aaKnown RBP eCLIP16.85■□□□□ 0.29
CNOT3-201ENST00000221232 CFAP100Q494V2 611 aa16.85■□□□□ 0.29
CNOT3-201ENST00000221232 USP49Q70CQ1 688 aa16.85■□□□□ 0.29
CNOT3-201ENST00000221232 NOSTRINQ8IVI9 506 aa16.85■□□□□ 0.29
CNOT3-201ENST00000221232 TRIM22Q8IYM9 498 aa16.85■□□□□ 0.29
CNOT3-201ENST00000221232 CCAR2Q8N163 923 aaKnown RBP16.85■□□□□ 0.29
CNOT3-201ENST00000221232 UBAC1Q9BSL1 405 aa16.85■□□□□ 0.29
CNOT3-201ENST00000221232 KRT23Q9C075 422 aa16.85■□□□□ 0.29
CNOT3-201ENST00000221232 FANCLQ9NW38 375 aa16.85■□□□□ 0.29
CNOT3-201ENST00000221232 AKAP11Q9UKA4 1901 aa16.85■□□□□ 0.29
CNOT3-201ENST00000221232 POLR2DO15514 142 aaKnown RBP16.84■□□□□ 0.29
CNOT3-201ENST00000221232 FMNL1O95466 1100 aaPredicted RBP16.84■□□□□ 0.29
CNOT3-201ENST00000221232 GTF2E1P29083 439 aaPredicted RBP16.84■□□□□ 0.29
CNOT3-201ENST00000221232 LIFRP42702 1097 aa16.84■□□□□ 0.29
CNOT3-201ENST00000221232 UBASH3AP57075 661 aa16.84■□□□□ 0.29
CNOT3-201ENST00000221232 PDE4BQ07343 736 aa16.84■□□□□ 0.29
CNOT3-201ENST00000221232 PDE4CQ08493 712 aa16.84■□□□□ 0.29
CNOT3-201ENST00000221232 SART3Q15020 963 aaKnown RBP16.84■□□□□ 0.29
CNOT3-201ENST00000221232 PAPPAQ13219 1627 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms