RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 DNAJC21Q5F1R6 531 aaKnown RBP12.42□□□□□ -0.42
KNOP1-201ENST00000219837 FAM200AQ8TCP9 573 aa12.42□□□□□ -0.42
KNOP1-201ENST00000219837 FAM89AQ96GI7 184 aa12.42□□□□□ -0.42
KNOP1-201ENST00000219837 TBC1D7Q9P0N9 293 aa12.42□□□□□ -0.42
KNOP1-201ENST00000219837 TXKP42681 527 aa12.42□□□□□ -0.42
KNOP1-201ENST00000219837 PLCD1P51178 756 aa12.42□□□□□ -0.42
KNOP1-201ENST00000219837 PPP2R5CQ13362 524 aa12.42□□□□□ -0.42
KNOP1-201ENST00000219837 CCDC24Q8N4L8 307 aa12.42□□□□□ -0.42
KNOP1-201ENST00000219837 SUPT20HQ8NEM7 779 aa12.42□□□□□ -0.42
KNOP1-201ENST00000219837 VPS18Q9P253 973 aa12.42□□□□□ -0.42
KNOP1-201ENST00000219837 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.42□□□□□ -0.42
KNOP1-201ENST00000219837 V9GYY5 206 aaPredicted RBP12.42□□□□□ -0.42
KNOP1-201ENST00000219837 PDE8AO60658 829 aa12.41□□□□□ -0.42
KNOP1-201ENST00000219837 TAF5LO75529 589 aa12.41□□□□□ -0.42
KNOP1-201ENST00000219837 PPP2R5DQ14738 602 aa12.41□□□□□ -0.42
KNOP1-201ENST00000219837 TNNC1P63316 161 aa12.41□□□□□ -0.42
KNOP1-201ENST00000219837 HAUS3Q68CZ6 603 aa12.41□□□□□ -0.42
KNOP1-201ENST00000219837 ZFYVE9O95405 1425 aa12.41□□□□□ -0.42
KNOP1-201ENST00000219837 IQUBQ8NA54 791 aa12.41□□□□□ -0.42
KNOP1-201ENST00000219837 XAGE2Q96GT9 111 aa12.41□□□□□ -0.42
KNOP1-201ENST00000219837 ZNF594Q96JF6 807 aaPredicted RBP12.41□□□□□ -0.42
KNOP1-201ENST00000219837 TLDC2A0PJX2 215 aa12.41□□□□□ -0.42
KNOP1-201ENST00000219837 MED10Q9BTT4 135 aa12.41□□□□□ -0.42
KNOP1-201ENST00000219837 NOLC1Q14978 699 aaKnown RBP eCLIP12.41□□□□□ -0.42
KNOP1-201ENST00000219837 VPS52Q8N1B4 723 aa12.41□□□□□ -0.42
KNOP1-201ENST00000219837 LINS1Q8NG48 757 aa12.41□□□□□ -0.42
KNOP1-201ENST00000219837 USTQ9Y2C2 406 aa12.41□□□□□ -0.42
KNOP1-201ENST00000219837 STK24Q9Y6E0 443 aa12.41□□□□□ -0.42
KNOP1-201ENST00000219837 CIB2O75838 187 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 INF2Q27J81 1249 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 NIM1KQ8IY84 436 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 PLBD2Q8NHP8 589 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 PRIMPOLQ96LW4 560 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 RPS6KB1P23443 525 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 ADCY7P51828 1080 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 CALCOCO2Q13137 446 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 A0A1B0GUL7 405 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 AKR1B15C9JRZ8 316 aaPredicted RBP12.4□□□□□ -0.42
KNOP1-201ENST00000219837 KRT24Q2M2I5 525 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 FMNL3Q8IVF7 1028 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 CCDC26Q8TAB7 109 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 ANO3Q9BYT9 981 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.4□□□□□ -0.42
KNOP1-201ENST00000219837 EP400NLQ6ZTU2 488 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 MYCT1Q8N699 235 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 HOOK2Q96ED9 719 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 CLSTN2Q9H4D0 955 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 DEXIO95424 95 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 CSRNP2Q9H175 543 aa12.4□□□□□ -0.42
KNOP1-201ENST00000219837 DNM2P50570 870 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 C19orf44Q9H6X5 657 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 LUC7L2Q9Y383 392 aaKnown RBP12.39□□□□□ -0.43
KNOP1-201ENST00000219837 UTP11Q9Y3A2 253 aaKnown RBP12.39□□□□□ -0.43
KNOP1-201ENST00000219837 A0A1B0GVL5 298 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 APBA3O96018 575 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 RNASE9P60153 205 aaKnown RBP12.39□□□□□ -0.43
KNOP1-201ENST00000219837 CUL4BQ13620 913 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 TNNI3KQ59H18 835 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 GPR161Q8N6U8 529 aaKnown RBP12.39□□□□□ -0.43
KNOP1-201ENST00000219837 TSPYL6Q8N831 410 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 NSMCE1Q8WV22 266 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 MKRN1Q9UHC7 482 aaKnown RBP12.39□□□□□ -0.43
KNOP1-201ENST00000219837 FPGT-TNNI3KV9GXZ4 949 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 ZNF608Q9ULD9 1512 aaPredicted RBP12.39□□□□□ -0.43
KNOP1-201ENST00000219837 GCP02774 474 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 ATP5DP30049 168 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 SYT10Q6XYQ8 523 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 SAMD15Q9P1V8 674 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 ZEB2O60315 1214 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 GCNT3O95395 438 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 IRX5P78411 483 aaPredicted RBP12.39□□□□□ -0.43
KNOP1-201ENST00000219837 CCDC122Q5T0U0 273 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 TGFBRAP1Q8WUH2 860 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 PARP10Q53GL7 1025 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 CPLX4Q7Z7G2 160 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 KRT222Q8N1A0 295 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 VPS16Q9H269 839 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 PCDHB15Q9Y5E8 787 aa12.39□□□□□ -0.43
KNOP1-201ENST00000219837 FAM170AA1A519 330 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 DYNC1I1O14576 645 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 DKC1O60832 514 aaKnown RBP eCLIP12.38□□□□□ -0.43
KNOP1-201ENST00000219837 SETDB1Q15047 1291 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 CPXCR1Q8N123 301 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 IP6K1Q92551 441 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 EYA1Q99502 592 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 SLC27A2O14975 620 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 MNAT1P51948 309 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 VWA3BQ502W6 1294 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 UBL4BQ8N7F7 174 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 POLKQ9UBT6 870 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 SYNRGQ9UMZ2 1314 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 BIVM-ERCC5R4GMW8 1640 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 IVLP07476 585 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 CALCRLQ16602 461 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 CEP85LQ5SZL2 805 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 TBC1D31Q96DN5 1066 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 MAPK8IP1Q9UQF2 711 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 VAV2P52735 878 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 IRX3P78415 501 aaPredicted RBP12.38□□□□□ -0.43
KNOP1-201ENST00000219837 GADL1Q6ZQY3 521 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms