RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Acnat2Q8BGG9 420 aa17.33■□□□□ 0.37
Trim11-203ENSMUST00000108810 Olfml1Q8BSH2 233 aa17.33■□□□□ 0.37
Trim11-203ENSMUST00000108810 Snw1Q9CSN1 536 aaKnown RBP17.33■□□□□ 0.37
Trim11-203ENSMUST00000108810 Telo2Q9DC40 840 aaKnown RBP17.33■□□□□ 0.37
Trim11-203ENSMUST00000108810 Scn9aQ62205 1984 aa17.33■□□□□ 0.37
Trim11-203ENSMUST00000108810 Col20a1Q923P0 1320 aa17.33■□□□□ 0.36
Trim11-203ENSMUST00000108810 Kif22Q3V300 660 aa17.33■□□□□ 0.36
Trim11-203ENSMUST00000108810 Mum1l1Q4VA55 681 aa17.33■□□□□ 0.36
Trim11-203ENSMUST00000108810 Atp1a3Q6PIC6 1013 aa17.33■□□□□ 0.36
Trim11-203ENSMUST00000108810 Tmem179Q8BHH9 233 aa17.33■□□□□ 0.36
Trim11-203ENSMUST00000108810 StrcQ8VIM6 1809 aa17.33■□□□□ 0.36
Trim11-203ENSMUST00000108810 Gm3893E9Q1I1 302 aa17.32■□□□□ 0.36
Trim11-203ENSMUST00000108810 Usp25P57080 1055 aa17.32■□□□□ 0.36
Trim11-203ENSMUST00000108810 Gm28047Q3US59 414 aa17.32■□□□□ 0.36
Trim11-203ENSMUST00000108810 Sec62Q8BU14 398 aaKnown RBP17.32■□□□□ 0.36
Trim11-203ENSMUST00000108810 Srek1Q8BZX4 494 aaKnown RBP17.32■□□□□ 0.36
Trim11-203ENSMUST00000108810 Ttc27Q8CD92 847 aa17.32■□□□□ 0.36
Trim11-203ENSMUST00000108810 Yeats4Q9CR11 227 aaKnown RBP17.32■□□□□ 0.36
Trim11-203ENSMUST00000108810 Tsc2Q61037 1814 aa17.32■□□□□ 0.36
Trim11-203ENSMUST00000108810 Lamb1P02469 1786 aa17.32■□□□□ 0.36
Trim11-203ENSMUST00000108810 Tyro3P55144 880 aa17.32■□□□□ 0.36
Trim11-203ENSMUST00000108810 Rtn1Q8K0T0 780 aa17.32■□□□□ 0.36
Trim11-203ENSMUST00000108810 Prdm11A2AGX3 565 aa17.31■□□□□ 0.36
Trim11-203ENSMUST00000108810 Hmgb2P30681 210 aaKnown RBP17.31■□□□□ 0.36
Trim11-203ENSMUST00000108810 Ttll4Q80UG8 1193 aa17.31■□□□□ 0.36
Trim11-203ENSMUST00000108810 Cdca8Q8BHX3 289 aa17.31■□□□□ 0.36
Trim11-203ENSMUST00000108810 Uba5Q8VE47 403 aa17.31■□□□□ 0.36
Trim11-203ENSMUST00000108810 Mctp1E9PV86 951 aa17.31■□□□□ 0.36
Trim11-203ENSMUST00000108810 Abl1P00520 1123 aa17.31■□□□□ 0.36
Trim11-203ENSMUST00000108810 U2af2P26369 475 aaKnown RBP17.31■□□□□ 0.36
Trim11-203ENSMUST00000108810 Epha2Q03145 977 aa17.31■□□□□ 0.36
Trim11-203ENSMUST00000108810 Ccdc162pQ0VG85 912 aa17.31■□□□□ 0.36
Trim11-203ENSMUST00000108810 Pus7lQ8CE46 702 aa17.31■□□□□ 0.36
Trim11-203ENSMUST00000108810 Ccdc39Q9D5Y1 937 aa17.31■□□□□ 0.36
Trim11-203ENSMUST00000108810 NppbP40753 121 aa17.3■□□□□ 0.36
Trim11-203ENSMUST00000108810 Best3Q6H1V1 669 aa17.3■□□□□ 0.36
Trim11-203ENSMUST00000108810 QarsQ8BML9 775 aa17.3■□□□□ 0.36
Trim11-203ENSMUST00000108810 Dnm1P39053 867 aa17.3■□□□□ 0.36
Trim11-203ENSMUST00000108810 Vps37dQ810I0 261 aa17.3■□□□□ 0.36
Trim11-203ENSMUST00000108810 Slc44a4Q91VA1 707 aa17.3■□□□□ 0.36
Trim11-203ENSMUST00000108810 NenfQ9CQ45 171 aa17.3■□□□□ 0.36
Trim11-203ENSMUST00000108810 Ccer1Q9CQL2 403 aa17.3■□□□□ 0.36
Trim11-203ENSMUST00000108810 Sned1Q70E20 1403 aa17.3■□□□□ 0.36
Trim11-203ENSMUST00000108810 AU015836B2RUM3 263 aa17.29■□□□□ 0.36
Trim11-203ENSMUST00000108810 Kif3aP28741 701 aa17.29■□□□□ 0.36
Trim11-203ENSMUST00000108810 Nfe2l3Q9WTM4 660 aa17.29■□□□□ 0.36
Trim11-203ENSMUST00000108810 Sh3bgrQ9WUZ7 214 aa17.29■□□□□ 0.36
Trim11-203ENSMUST00000108810 Peak1Q69Z38 1735 aa17.29■□□□□ 0.36
Trim11-203ENSMUST00000108810 Aox4Q3TYQ9 1336 aa17.29■□□□□ 0.36
Trim11-203ENSMUST00000108810 Ces1hD3Z298 562 aa17.29■□□□□ 0.36
Trim11-203ENSMUST00000108810 Hmx1O70218 332 aa17.29■□□□□ 0.36
Trim11-203ENSMUST00000108810 CebpaP53566 359 aa17.29■□□□□ 0.36
Trim11-203ENSMUST00000108810 Gpatch3Q8BIY1 525 aa17.29■□□□□ 0.36
Trim11-203ENSMUST00000108810 Trmt44Q9D2Q2 713 aa17.29■□□□□ 0.36
Trim11-203ENSMUST00000108810 Stk39Q9Z1W9 556 aa17.29■□□□□ 0.36
Trim11-203ENSMUST00000108810 Tulp1Q9Z273 543 aa17.29■□□□□ 0.36
Trim11-203ENSMUST00000108810 Rbm6S4R1W5 1118 aaKnown RBP17.29■□□□□ 0.36
Trim11-203ENSMUST00000108810 Rrp1P56183 494 aaKnown RBP17.28■□□□□ 0.36
Trim11-203ENSMUST00000108810 Bach1P97302 739 aa17.28■□□□□ 0.36
Trim11-203ENSMUST00000108810 Sptlc2P97363 560 aaKnown RBP17.28■□□□□ 0.36
Trim11-203ENSMUST00000108810 Stk38Q91VJ4 465 aa17.28■□□□□ 0.36
Trim11-203ENSMUST00000108810 Pcdhb15Q91Y04 786 aa17.28■□□□□ 0.36
Trim11-203ENSMUST00000108810 Utp3Q9JI13 469 aaKnown RBP17.28■□□□□ 0.36
Trim11-203ENSMUST00000108810 Gm36210A0A1B0GS00 229 aa17.27■□□□□ 0.36
Trim11-203ENSMUST00000108810 Zbtb21E9Q444 1094 aa17.27■□□□□ 0.36
Trim11-203ENSMUST00000108810 Ppp4cP97470 307 aa17.27■□□□□ 0.36
Trim11-203ENSMUST00000108810 Slc51aQ8R000 340 aa17.27■□□□□ 0.36
Trim11-203ENSMUST00000108810 Erich6bQ9D4S6 220 aa17.27■□□□□ 0.36
Trim11-203ENSMUST00000108810 Mtcl1Q3UHU5 1945 aa17.27■□□□□ 0.36
Trim11-203ENSMUST00000108810 Ccdc173A0JLY1 547 aa17.27■□□□□ 0.35
Trim11-203ENSMUST00000108810 Prr16A3KMN5 304 aa17.27■□□□□ 0.35
Trim11-203ENSMUST00000108810 Tmed8Q3UHI4 326 aa17.27■□□□□ 0.35
Trim11-203ENSMUST00000108810 Wasf1Q8R5H6 559 aa17.27■□□□□ 0.35
Trim11-203ENSMUST00000108810 Dusp10Q9ESS0 483 aa17.27■□□□□ 0.35
Trim11-203ENSMUST00000108810 Ltbp2O08999 1813 aa17.26■□□□□ 0.35
Trim11-203ENSMUST00000108810 Nmt2O70311 529 aa17.26■□□□□ 0.35
Trim11-203ENSMUST00000108810 Cplx1P63040 134 aa17.26■□□□□ 0.35
Trim11-203ENSMUST00000108810 Rpusd2Q149F1 553 aa17.26■□□□□ 0.35
Trim11-203ENSMUST00000108810 Ppp2r5bQ6PD28 497 aa17.26■□□□□ 0.35
Trim11-203ENSMUST00000108810 Fez1Q8K0X8 392 aa17.26■□□□□ 0.35
Trim11-203ENSMUST00000108810 Hps3Q91VB4 1002 aa17.26■□□□□ 0.35
Trim11-203ENSMUST00000108810 Nrxn2E9Q7X7 1710 aa17.26■□□□□ 0.35
Trim11-203ENSMUST00000108810 Gm43638A0A0J9YU36 694 aa17.26■□□□□ 0.35
Trim11-203ENSMUST00000108810 Clec11aO88200 328 aa17.26■□□□□ 0.35
Trim11-203ENSMUST00000108810 Fxr1Q61584 677 aaKnown RBP17.26■□□□□ 0.35
Trim11-203ENSMUST00000108810 Msl1Q6PDM1 616 aa17.26■□□□□ 0.35
Trim11-203ENSMUST00000108810 Tbc1d5Q80XQ2 815 aa17.26■□□□□ 0.35
Trim11-203ENSMUST00000108810 Zkscan7E9PVW1 718 aa17.25■□□□□ 0.35
Trim11-203ENSMUST00000108810 Fhdc1Q3ULZ2 1149 aa17.25■□□□□ 0.35
Trim11-203ENSMUST00000108810 CrebrfQ8CDG5 640 aaKnown RBP17.25■□□□□ 0.35
Trim11-203ENSMUST00000108810 Kcnj14Q8JZN3 434 aa17.25■□□□□ 0.35
Trim11-203ENSMUST00000108810 Plcd3Q8K2J0 785 aa17.25■□□□□ 0.35
Trim11-203ENSMUST00000108810 Tbc1d8bA3KGB4 1114 aa17.25■□□□□ 0.35
Trim11-203ENSMUST00000108810 TbcaP48428 108 aaKnown RBP17.25■□□□□ 0.35
Trim11-203ENSMUST00000108810 Adcy5P84309 1262 aa17.25■□□□□ 0.35
Trim11-203ENSMUST00000108810 Polr3gQ6NXY9 223 aa17.25■□□□□ 0.35
Trim11-203ENSMUST00000108810 Kif1bpQ6ZPU9 617 aa17.25■□□□□ 0.35
Trim11-203ENSMUST00000108810 Q8K2W9 541 aa17.25■□□□□ 0.35
Trim11-203ENSMUST00000108810 Stn1Q8K2X3 378 aa17.25■□□□□ 0.35
Trim11-203ENSMUST00000108810 Cep89Q9CZX2 791 aa17.25■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms