RNA–Protein interactions for RNA: ENSMUST00000065785.3

Trim50-201, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim50, Length 1,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-201ENSMUST00000065785 ErfeQ6PGN1 340 aa18.42■□□□□ 0.54
Trim50-201ENSMUST00000065785 Atxn2lQ7TQH0 1049 aaKnown RBP18.42■□□□□ 0.54
Trim50-201ENSMUST00000065785 Prkag3Q8BGM7 489 aa18.42■□□□□ 0.54
Trim50-201ENSMUST00000065785 Strip1Q8C079 837 aa18.42■□□□□ 0.54
Trim50-201ENSMUST00000065785 MlphQ91V27 590 aa18.42■□□□□ 0.54
Trim50-201ENSMUST00000065785 Kansl3A2RSY1 903 aaKnown RBP18.42■□□□□ 0.54
Trim50-201ENSMUST00000065785 Cspp1B2RX88 1205 aa18.42■□□□□ 0.54
Trim50-201ENSMUST00000065785 Bnip3O55003 187 aa18.42■□□□□ 0.54
Trim50-201ENSMUST00000065785 Hmx1O70218 332 aa18.42■□□□□ 0.54
Trim50-201ENSMUST00000065785 Kif22Q3V300 660 aa18.42■□□□□ 0.54
Trim50-201ENSMUST00000065785 Rrp12Q6P5B0 1295 aaKnown RBP18.42■□□□□ 0.54
Trim50-201ENSMUST00000065785 Atp1a3Q6PIC6 1013 aa18.42■□□□□ 0.54
Trim50-201ENSMUST00000065785 Col20a1Q923P0 1320 aa18.41■□□□□ 0.54
Trim50-201ENSMUST00000065785 Kif13bA0A286YCV9 1847 aa18.41■□□□□ 0.54
Trim50-201ENSMUST00000065785 Gm43638A0A0J9YU36 694 aa18.41■□□□□ 0.54
Trim50-201ENSMUST00000065785 Tnni2P13412 182 aa18.41■□□□□ 0.54
Trim50-201ENSMUST00000065785 Cplx1P63040 134 aa18.41■□□□□ 0.54
Trim50-201ENSMUST00000065785 IqcgQ80W32 419 aa18.41■□□□□ 0.54
Trim50-201ENSMUST00000065785 Vps37dQ810I0 261 aa18.41■□□□□ 0.54
Trim50-201ENSMUST00000065785 Acnat2Q8BGG9 420 aa18.41■□□□□ 0.54
Trim50-201ENSMUST00000065785 Pdcl3Q8BVF2 240 aa18.41■□□□□ 0.54
Trim50-201ENSMUST00000065785 Rtn1Q8K0T0 780 aa18.41■□□□□ 0.54
Trim50-201ENSMUST00000065785 Col23a1Q8K4G2 532 aa18.41■□□□□ 0.54
Trim50-201ENSMUST00000065785 Mrpl12Q9DB15 201 aaKnown RBP18.41■□□□□ 0.54
Trim50-201ENSMUST00000065785 Ush1cQ9ES64 910 aa18.41■□□□□ 0.54
Trim50-201ENSMUST00000065785 Hmgn5Q9JL35 406 aa18.41■□□□□ 0.54
Trim50-201ENSMUST00000065785 Dnm1P39053 867 aa18.4■□□□□ 0.54
Trim50-201ENSMUST00000065785 Bend4P86174 541 aa18.4■□□□□ 0.54
Trim50-201ENSMUST00000065785 Bach2P97303 839 aa18.4■□□□□ 0.54
Trim50-201ENSMUST00000065785 Spata5Q3UMC0 893 aaKnown RBP18.4■□□□□ 0.54
Trim50-201ENSMUST00000065785 Ctr9Q62018 1173 aaKnown RBP18.4■□□□□ 0.54
Trim50-201ENSMUST00000065785 HelbQ6NVF4 1074 aa18.4■□□□□ 0.54
Trim50-201ENSMUST00000065785 Rbm6S4R1W5 1118 aaKnown RBP18.4■□□□□ 0.54
Trim50-201ENSMUST00000065785 Gas1Q01721 343 aa18.39■□□□□ 0.54
Trim50-201ENSMUST00000065785 Prom2Q3UUY6 835 aa18.39■□□□□ 0.54
Trim50-201ENSMUST00000065785 1700018B08RikQ9DA83 213 aa18.39■□□□□ 0.54
Trim50-201ENSMUST00000065785 Mx2Q9WVP9 655 aa18.39■□□□□ 0.54
Trim50-201ENSMUST00000065785 Adgra3Q7TT36 1310 aa18.39■□□□□ 0.54
Trim50-201ENSMUST00000065785 StrcQ8VIM6 1809 aa18.39■□□□□ 0.53
Trim50-201ENSMUST00000065785 AfdnQ9QZQ1 1820 aaKnown RBP18.39■□□□□ 0.53
Trim50-201ENSMUST00000065785 Tbc1d8bA3KGB4 1114 aa18.39■□□□□ 0.53
Trim50-201ENSMUST00000065785 Hvcn1Q3U2S8 269 aa18.39■□□□□ 0.53
Trim50-201ENSMUST00000065785 1810065E05RikQ5NC41 235 aa18.39■□□□□ 0.53
Trim50-201ENSMUST00000065785 CrebrfQ8CDG5 640 aaKnown RBP18.39■□□□□ 0.53
Trim50-201ENSMUST00000065785 UvssaQ9D479 717 aa18.39■□□□□ 0.53
Trim50-201ENSMUST00000065785 Mei1Q9D4I2 1268 aa18.39■□□□□ 0.53
Trim50-201ENSMUST00000065785 Mmel1Q9JLI3 765 aa18.39■□□□□ 0.53
Trim50-201ENSMUST00000065785 Zswim8Q3UHH1 1832 aaKnown RBP18.38■□□□□ 0.53
Trim50-201ENSMUST00000065785 Pramel3A2AHA7 463 aa18.38■□□□□ 0.53
Trim50-201ENSMUST00000065785 Gm7903A2AWL1 463 aa18.38■□□□□ 0.53
Trim50-201ENSMUST00000065785 AV320801A2AWL3 467 aa18.38■□□□□ 0.53
Trim50-201ENSMUST00000065785 Gm15023L7MUB4 467 aa18.38■□□□□ 0.53
Trim50-201ENSMUST00000065785 Stx1aO35526 288 aa18.38■□□□□ 0.53
Trim50-201ENSMUST00000065785 Becn1O88597 448 aa18.38■□□□□ 0.53
Trim50-201ENSMUST00000065785 SfswapQ3USH5 945 aaKnown RBP18.38■□□□□ 0.53
Trim50-201ENSMUST00000065785 Cep131Q62036 1060 aa18.38■□□□□ 0.53
Trim50-201ENSMUST00000065785 Fam170aQ66LM6 333 aa18.38■□□□□ 0.53
Trim50-201ENSMUST00000065785 Tbc1d5Q80XQ2 815 aa18.38■□□□□ 0.53
Trim50-201ENSMUST00000065785 Lrrc2Q8VDB8 371 aa18.38■□□□□ 0.53
Trim50-201ENSMUST00000065785 Ipo4Q8VI75 1082 aa18.38■□□□□ 0.53
Trim50-201ENSMUST00000065785 Eif4enif1Q9EST3 983 aaKnown RBP18.38■□□□□ 0.53
Trim50-201ENSMUST00000065785 Trpc5Q9QX29 975 aa18.38■□□□□ 0.53
Trim50-201ENSMUST00000065785 Ltn1Q6A009 1767 aa18.38■□□□□ 0.53
Trim50-201ENSMUST00000065785 Epha2Q03145 977 aa18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Fam83bQ0VBM2 1012 aa18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Kif1bpQ6ZPU9 617 aa18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Otop3Q80UF9 577 aa18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 QarsQ8BML9 775 aa18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Q8K2W9 541 aa18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Pcdhb15Q91Y04 786 aa18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Nop2Q922K7 793 aaKnown RBP18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 NsmfQ99NF2 532 aa18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 RarsQ9D0I9 660 aaKnown RBP18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Dusp10Q9ESS0 483 aa18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Efcc1Q9JJF6 558 aa18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Dock5B2RY04 1868 aa18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Myh13B1AR69 1938 aa18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Ampd3O08739 766 aa18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Calm1P0DP26 149 aaKnown RBP18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Calm2P0DP27 149 aaKnown RBP18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Calm3P0DP28 149 aaKnown RBP18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Tpm3P21107 285 aaKnown RBP18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Dnajc2P54103 621 aaKnown RBP18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Polr3gQ6NXY9 223 aa18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Adck5Q80V03 582 aa18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Sec62Q8BU14 398 aaKnown RBP18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Pus7lQ8CE46 702 aa18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 NenfQ9CQ45 171 aa18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Stk39Q9Z1W9 556 aa18.37■□□□□ 0.53
Trim50-201ENSMUST00000065785 Psd3Q2PFD7 1037 aa18.36■□□□□ 0.53
Trim50-201ENSMUST00000065785 Tbc1d31Q6NXY1 996 aa18.36■□□□□ 0.53
Trim50-201ENSMUST00000065785 Rbm5Q91YE7 815 aaKnown RBP18.36■□□□□ 0.53
Trim50-201ENSMUST00000065785 Brpf3B2KF05 1204 aaKnown RBP18.35■□□□□ 0.53
Trim50-201ENSMUST00000065785 Ces1hD3Z298 562 aa18.35■□□□□ 0.53
Trim50-201ENSMUST00000065785 Mindy4Q3UQI9 744 aa18.35■□□□□ 0.53
Trim50-201ENSMUST00000065785 Ccdc51Q3URS9 406 aa18.35■□□□□ 0.53
Trim50-201ENSMUST00000065785 Tmtc2Q56A06 836 aa18.35■□□□□ 0.53
Trim50-201ENSMUST00000065785 Ttll4Q80UG8 1193 aa18.35■□□□□ 0.53
Trim50-201ENSMUST00000065785 Tmem179Q8BHH9 233 aa18.35■□□□□ 0.53
Trim50-201ENSMUST00000065785 St5Q924W7 1134 aa18.35■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms