RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 Traf1P39428 409 aa17.2■□□□□ 0.34
Usp38-201ENSMUST00000042724 Ccdc174Q3U155 467 aa17.2■□□□□ 0.34
Usp38-201ENSMUST00000042724 Atp1a3Q6PIC6 1013 aa17.2■□□□□ 0.34
Usp38-201ENSMUST00000042724 Ccdc181Q80ZU5 509 aa17.2■□□□□ 0.34
Usp38-201ENSMUST00000042724 NapaQ9DB05 295 aa17.2■□□□□ 0.34
Usp38-201ENSMUST00000042724 Prpf38aQ4FK66 312 aaKnown RBP17.2■□□□□ 0.34
Usp38-201ENSMUST00000042724 Ccdc189Q6NZQ0 333 aa17.2■□□□□ 0.34
Usp38-201ENSMUST00000042724 VmacQ8BP01 174 aa17.2■□□□□ 0.34
Usp38-201ENSMUST00000042724 Kcnj14Q8JZN3 434 aa17.2■□□□□ 0.34
Usp38-201ENSMUST00000042724 Trmt44Q9D2Q2 713 aa17.2■□□□□ 0.34
Usp38-201ENSMUST00000042724 Ybx3Q9JKB3 361 aaKnown RBP17.2■□□□□ 0.34
Usp38-201ENSMUST00000042724 Vmn2r68L7N2B3 851 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Sgsm1Q8BPQ7 1093 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Gimap7Q8R379 293 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Osbpl5Q9ER64 874 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Azi2Q9QYP6 405 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Trim30cD3YVI9 513 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Cyp3a57D3YYZ0 503 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Pcdhb9E9Q5G2 828 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Gm10378F6XQQ1 160 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Krt15Q61414 452 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Zfp202Q8C879 641 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Med23Q80YQ2 1367 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Armc3A2AU72 881 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Gm20425E9Q035 978 aaKnown RBP17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Gm4758L7N258 96 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 SrprbP47758 269 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Foxp1P58462 705 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Sp4Q62445 782 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Kdm1aQ6ZQ88 853 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Ccdc113Q8C5T8 377 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Bola3Q8CEI1 110 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Tubb4aQ9D6F9 444 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Rps6ka4Q9Z2B9 773 aa17.19■□□□□ 0.34
Usp38-201ENSMUST00000042724 Ifit1Q64282 463 aa17.18■□□□□ 0.34
Usp38-201ENSMUST00000042724 Dmrtc1Q9D9R7 182 aa17.18■□□□□ 0.34
Usp38-201ENSMUST00000042724 Sos2Q02384 1333 aa17.18■□□□□ 0.34
Usp38-201ENSMUST00000042724 Eya3P97480 510 aa17.18■□□□□ 0.34
Usp38-201ENSMUST00000042724 Pde5aQ8CG03 865 aa17.18■□□□□ 0.34
Usp38-201ENSMUST00000042724 Vps36Q91XD6 386 aa17.18■□□□□ 0.34
Usp38-201ENSMUST00000042724 Tfcp2Q9ERA0 502 aa17.18■□□□□ 0.34
Usp38-201ENSMUST00000042724 GabrdP22933 449 aa17.18■□□□□ 0.34
Usp38-201ENSMUST00000042724 Ttll12Q3UDE2 639 aa17.18■□□□□ 0.34
Usp38-201ENSMUST00000042724 Galnt17Q7TT15 598 aa17.18■□□□□ 0.34
Usp38-201ENSMUST00000042724 Polr2dQ9D7M8 142 aaKnown RBP17.18■□□□□ 0.34
Usp38-201ENSMUST00000042724 Setd1bQ8CFT2 1985 aa17.18■□□□□ 0.34
Usp38-201ENSMUST00000042724 Igbp1Q61249 340 aa17.18■□□□□ 0.34
Usp38-201ENSMUST00000042724 Nop53Q8BK35 484 aaKnown RBP17.18■□□□□ 0.34
Usp38-201ENSMUST00000042724 Apol10bG3X9K7 334 aa17.17■□□□□ 0.34
Usp38-201ENSMUST00000042724 Olfr118Q7TRJ6 321 aa17.17■□□□□ 0.34
Usp38-201ENSMUST00000042724 Dydc1Q9D9T0 175 aa17.17■□□□□ 0.34
Usp38-201ENSMUST00000042724 Zscan18E9PUD6 809 aa17.17■□□□□ 0.34
Usp38-201ENSMUST00000042724 Zscan22Q8BGS5 496 aa17.17■□□□□ 0.34
Usp38-201ENSMUST00000042724 Lman1Q9D0F3 517 aa17.17■□□□□ 0.34
Usp38-201ENSMUST00000042724 Cxcl11Q9JHH5 100 aa17.17■□□□□ 0.34
Usp38-201ENSMUST00000042724 Egfl6Q9JJZ5 550 aa17.17■□□□□ 0.34
Usp38-201ENSMUST00000042724 Gas8Q60779 478 aa17.16■□□□□ 0.34
Usp38-201ENSMUST00000042724 Pknox2Q8BG99 474 aa17.16■□□□□ 0.34
Usp38-201ENSMUST00000042724 Riox2Q8CD15 465 aa17.16■□□□□ 0.34
Usp38-201ENSMUST00000042724 Ctage5Q8R311 779 aa17.16■□□□□ 0.34
Usp38-201ENSMUST00000042724 Ifih1Q8R5F7 1025 aa17.16■□□□□ 0.34
Usp38-201ENSMUST00000042724 Uba5Q8VE47 403 aa17.16■□□□□ 0.34
Usp38-201ENSMUST00000042724 Hip1rQ9JKY5 1068 aa17.16■□□□□ 0.34
Usp38-201ENSMUST00000042724 Xrn1P97789 1719 aaKnown RBP17.16■□□□□ 0.34
Usp38-201ENSMUST00000042724 Kif17Q99PW8 1038 aa17.16■□□□□ 0.34
Usp38-201ENSMUST00000042724 MeiocA2AG06 965 aa17.16■□□□□ 0.34
Usp38-201ENSMUST00000042724 Tom1l2Q5SRX1 507 aa17.16■□□□□ 0.34
Usp38-201ENSMUST00000042724 Ddx27Q921N6 760 aaKnown RBP17.16■□□□□ 0.34
Usp38-201ENSMUST00000042724 Ccdc7Q9D541 371 aa17.16■□□□□ 0.34
Usp38-201ENSMUST00000042724 Cnpy2Q9QXT0 182 aa17.16■□□□□ 0.34
Usp38-201ENSMUST00000042724 Uso1Q9Z1Z0 959 aaKnown RBP17.16■□□□□ 0.34
Usp38-201ENSMUST00000042724 Usp42B2RQC2 1324 aaKnown RBP17.16■□□□□ 0.34
Usp38-201ENSMUST00000042724 MypnQ5DTJ9 1315 aa17.16■□□□□ 0.34
Usp38-201ENSMUST00000042724 Exoc3Q6KAR6 755 aa17.16■□□□□ 0.34
Usp38-201ENSMUST00000042724 Ano3A2AHL1 981 aa17.15■□□□□ 0.34
Usp38-201ENSMUST00000042724 Naa30Q8CES0 364 aa17.15■□□□□ 0.34
Usp38-201ENSMUST00000042724 Col15a1O35206 1367 aa17.15■□□□□ 0.34
Usp38-201ENSMUST00000042724 Kcnh4A2A5F7 1018 aa17.15■□□□□ 0.34
Usp38-201ENSMUST00000042724 Slc44a1Q6X893 653 aa17.15■□□□□ 0.34
Usp38-201ENSMUST00000042724 Naa15Q80UM3 865 aaKnown RBP17.15■□□□□ 0.34
Usp38-201ENSMUST00000042724 HibadhQ99L13 335 aaKnown RBP17.15■□□□□ 0.34
Usp38-201ENSMUST00000042724 Smco2Q9DA21 347 aa17.15■□□□□ 0.34
Usp38-201ENSMUST00000042724 Akap2O54931 893 aa17.15■□□□□ 0.34
Usp38-201ENSMUST00000042724 Susd4Q8BH32 490 aa17.15■□□□□ 0.34
Usp38-201ENSMUST00000042724 StrbpQ91WM1 672 aaKnown RBP17.15■□□□□ 0.34
Usp38-201ENSMUST00000042724 Adamts7Q68SA9 1657 aa17.15■□□□□ 0.34
Usp38-201ENSMUST00000042724 Gm1993A6X8I0 212 aa17.15■□□□□ 0.34
Usp38-201ENSMUST00000042724 SlxD3Z347 212 aa17.15■□□□□ 0.34
Usp38-201ENSMUST00000042724 Serpinc1P32261 465 aa17.15■□□□□ 0.34
Usp38-201ENSMUST00000042724 Amhr2Q8K592 568 aa17.15■□□□□ 0.34
Usp38-201ENSMUST00000042724 Stxbp3Q60770 592 aa17.14■□□□□ 0.33
Usp38-201ENSMUST00000042724 Cep128Q8BI22 1102 aa17.14■□□□□ 0.33
Usp38-201ENSMUST00000042724 Mroh6V9GX81 722 aa17.14■□□□□ 0.33
Usp38-201ENSMUST00000042724 AdgbG3UZ78 1657 aa17.14■□□□□ 0.33
Usp38-201ENSMUST00000042724 Cyp2c23E9Q5K4 494 aa17.14■□□□□ 0.33
Usp38-201ENSMUST00000042724 Nod2Q8K3Z0 1020 aa17.14■□□□□ 0.33
Usp38-201ENSMUST00000042724 Bmp2kQ91Z96 1138 aa17.14■□□□□ 0.33
Usp38-201ENSMUST00000042724 Ppil4Q9CXG3 492 aaKnown RBP17.14■□□□□ 0.33
Usp38-201ENSMUST00000042724 Gjc1P28229 396 aa17.14■□□□□ 0.33
Usp38-201ENSMUST00000042724 Cbx1P83917 185 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 79 ms