RNA–Protein interactions for RNA: ENSMUST00000021956.8

Ddx41-201, Transcript of Probable ATP-dependent RNA helicase DDX41, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx41, Length 2,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41-201ENSMUST00000021956 Prr29B1ARI9 187 aa20.53■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Ubap1lG3UW59 384 aa20.53■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Pde11aP0C1Q2 933 aa20.53■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Rad23aP54726 363 aa20.53■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Tubb5P99024 444 aaKnown RBP20.53■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Q66JV7 365 aa20.53■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Anks1bQ8BIZ1 1259 aa20.53■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Arhgef6Q8K4I3 771 aa20.53■□□□□ 0.88
Ddx41-201ENSMUST00000021956 BaatQ91X34 420 aa20.53■□□□□ 0.88
Ddx41-201ENSMUST00000021956 RabggtaQ9JHK4 567 aa20.53■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Hip1rQ9JKY5 1068 aa20.53■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Col3a1P08121 1464 aa20.53■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Acad12D3Z7X0 555 aa20.53■□□□□ 0.88
Ddx41-201ENSMUST00000021956 AK157302I3ITR1 129 aa20.53■□□□□ 0.88
Ddx41-201ENSMUST00000021956 PnnO35691 725 aaKnown RBP20.53■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Igsf3Q6ZQA6 1194 aa20.53■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Isca1Q9D924 129 aa20.53■□□□□ 0.88
Ddx41-201ENSMUST00000021956 PdclQ9DBX2 301 aa20.53■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Tpm3-rs7D3Z2H9 248 aa20.52■□□□□ 0.88
Ddx41-201ENSMUST00000021956 TsksO54887 585 aa20.52■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Foxp1P58462 705 aa20.52■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Eif5P59325 429 aaKnown RBP20.52■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Asic4Q7TNS7 539 aa20.52■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Map10Q8BJS7 891 aa20.52■□□□□ 0.88
Ddx41-201ENSMUST00000021956 DymQ8CHY3 669 aa20.52■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Sh2b1Q91ZM2 756 aa20.52■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Ssfa2Q922B9 1252 aa20.52■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Zbtb43Q9DAI4 467 aa20.52■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Kdm3aQ6PCM1 1323 aa20.52■□□□□ 0.88
Ddx41-201ENSMUST00000021956 Gcom1E9PZ54 550 aa20.51■□□□□ 0.87
Ddx41-201ENSMUST00000021956 MyzapQ3UIJ9 466 aa20.51■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Ift88Q61371 824 aa20.51■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Atp1a2Q6PIE5 1020 aa20.51■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Znf653Q6YND2 615 aa20.51■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Olfr119Q7TRJ5 321 aa20.51■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Ccdc83Q9D4V3 305 aa20.51■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Ugt1a6bK9J7B2 531 aa20.51■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Ugt1a6Q64435 531 aa20.51■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Ugt1a7cQ6ZQM8 531 aa20.51■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Slitrk3Q810B9 980 aa20.51■□□□□ 0.87
Ddx41-201ENSMUST00000021956 VmacQ8BP01 174 aa20.51■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Ccdc73Q8CDM4 1066 aa20.51■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Gdap1l1Q8VE33 370 aa20.51■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Ccdc39Q9D5Y1 937 aa20.51■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Zcchc17Q9ESX4 241 aaKnown RBP20.51■□□□□ 0.87
Ddx41-201ENSMUST00000021956 DccP70211 1447 aa20.5■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Sdc2P43407 202 aa20.5■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Llgl2Q3TJ91 1027 aa20.5■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Krt222Q8CCX5 294 aa20.5■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Wasf1Q8R5H6 559 aa20.5■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Lrrc2Q8VDB8 371 aa20.5■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Polr2dQ9D7M8 142 aaKnown RBP20.5■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Lipo1J3QME6 396 aa20.5■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Ankrd40Q5SUE8 363 aa20.5■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Hpcal4Q8BGZ1 191 aa20.5■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Dzip1Q8BMD2 852 aa20.5■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Pde5aQ8CG03 865 aa20.5■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Mrc1Q61830 1456 aa20.5■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Naaladl2A0A0N4SUJ3 795 aa20.49■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Myd88P22366 296 aa20.49■□□□□ 0.87
Ddx41-201ENSMUST00000021956 CrklP47941 303 aa20.49■□□□□ 0.87
Ddx41-201ENSMUST00000021956 ItpripQ3TNL8 555 aa20.49■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Rrp1bQ91YK2 724 aaKnown RBP20.49■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Efcab2Q9CQ46 164 aa20.49■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Fam213aQ9CYH2 218 aa20.49■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Nol7Q9D7Z3 254 aaKnown RBP20.49■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Cbx8Q9QXV1 362 aa20.49■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Gm21671G3UY31 267 aa20.49■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Pde6aP27664 859 aa20.49■□□□□ 0.87
Ddx41-201ENSMUST00000021956 ItgadQ3V0T4 1168 aa20.49■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Tsr1Q5SWD9 803 aa20.49■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Ctr9Q62018 1173 aaKnown RBP20.49■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Fam160b2Q80YR2 744 aa20.49■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Gimap5Q8BWF2 308 aa20.49■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Fam84aQ9D650 292 aa20.49■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Tube1Q9D6T1 475 aa20.49■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Tnks1bp1P58871 1720 aa20.48■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Sox5P35710 763 aa20.48■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Traf1P39428 409 aa20.48■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Cep112Q5PR68 954 aa20.48■□□□□ 0.87
Ddx41-201ENSMUST00000021956 MmeQ61391 750 aa20.48■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Ranbp6Q8BIV3 1105 aa20.48■□□□□ 0.87
Ddx41-201ENSMUST00000021956 AbraQ8BUZ1 375 aa20.48■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Krt23Q99PS0 422 aa20.48■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Pbx1P41778 430 aa20.47■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Ckap2Q3V1H1 664 aa20.47■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Recql4Q75NR7 1216 aaKnown RBP20.47■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Ctdspl2Q8BG15 465 aa20.47■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Smc2Q8CG48 1191 aaKnown RBP20.47■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Cfap45Q9D9U9 551 aa20.47■□□□□ 0.87
Ddx41-201ENSMUST00000021956 IncenpQ9WU62 880 aa20.47■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Med23Q80YQ2 1367 aa20.47■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Ank1Q02357 1862 aa20.47■□□□□ 0.87
Ddx41-201ENSMUST00000021956 RargP18911 458 aaKnown RBP20.47■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Prdm1Q60636 856 aa20.47■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Cyp7b1Q60991 507 aa20.47■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Snd1Q78PY7 910 aaKnown RBP20.47■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Necab1Q8BG18 352 aa20.47■□□□□ 0.87
Ddx41-201ENSMUST00000021956 Krt84Q99M73 603 aa20.47■□□□□ 0.87
Ddx41-201ENSMUST00000021956 SelenooQ9DBC0 667 aa20.47■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 50.9 ms