RNA–Protein interactions for RNA: ENST00000642018.1

CASC19-274, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 970 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-274ENST00000642018 THOC2Q8NI27 1593 aaKnown RBP12.55□□□□□ -0.4
CASC19-274ENST00000642018 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
CASC19-274ENST00000642018 PEG3Q9GZU2 1588 aa12.54□□□□□ -0.4
CASC19-274ENST00000642018 MIER1Q8N108 512 aa12.53□□□□□ -0.4
CASC19-274ENST00000642018 TRIM41Q8WV44 630 aa12.53□□□□□ -0.4
CASC19-274ENST00000642018 ZBTB47Q9UFB7 747 aaPredicted RBP12.52□□□□□ -0.41
CASC19-274ENST00000642018 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
CASC19-274ENST00000642018 IFNLR1Q8IU57 520 aaPredicted RBP12.49□□□□□ -0.41
CASC19-274ENST00000642018 SPOCK2Q92563 424 aa12.45□□□□□ -0.42
CASC19-274ENST00000642018 CADPSQ9ULU8 1353 aa12.44□□□□□ -0.42
CASC19-274ENST00000642018 KIF21AQ7Z4S6 1674 aa12.44□□□□□ -0.42
CASC19-274ENST00000642018 CLEC11AQ9Y240 323 aa12.42□□□□□ -0.42
CASC19-274ENST00000642018 MRC2Q9UBG0 1479 aa12.41□□□□□ -0.42
CASC19-274ENST00000642018 WDR62O43379 1518 aa12.37□□□□□ -0.43
CASC19-274ENST00000642018 MROH2BQ7Z745 1585 aa12.37□□□□□ -0.43
CASC19-274ENST00000642018 PRR29P0C7W0 189 aa12.36□□□□□ -0.43
CASC19-274ENST00000642018 REM2Q8IYK8 340 aaPredicted RBP12.34□□□□□ -0.43
CASC19-274ENST00000642018 CEP164Q9UPV0 1460 aa12.33□□□□□ -0.44
CASC19-274ENST00000642018 FANCD2Q9BXW9 1451 aa12.27□□□□□ -0.45
CASC19-274ENST00000642018 CIZ1Q9ULV3 898 aaPredicted RBP12.23□□□□□ -0.45
CASC19-274ENST00000642018 CFTRP13569 1480 aa12.22□□□□□ -0.45
CASC19-274ENST00000642018 ECM2O94769 699 aaPredicted RBP12.22□□□□□ -0.45
CASC19-274ENST00000642018 SLC24A1O60721 1099 aa12.19□□□□□ -0.46
CASC19-274ENST00000642018 WIZO95785 1651 aa12.19□□□□□ -0.46
CASC19-274ENST00000642018 PITPNM1O00562 1244 aa12.18□□□□□ -0.46
CASC19-274ENST00000642018 PKD2Q13563 968 aa12.18□□□□□ -0.46
CASC19-274ENST00000642018 GSE1Q14687 1217 aa12.17□□□□□ -0.46
CASC19-274ENST00000642018 CHRDL2Q6WN34 429 aa12.17□□□□□ -0.46
CASC19-274ENST00000642018 NPM1P06748 294 aaKnown RBP eCLIP12.15□□□□□ -0.46
CASC19-274ENST00000642018 URB2Q14146 1524 aaKnown RBP12.13□□□□□ -0.47
CASC19-274ENST00000642018 FAM212AQ96EL1 285 aa12.11□□□□□ -0.47
CASC19-274ENST00000642018 CREBZFQ9NS37 354 aa12.11□□□□□ -0.47
CASC19-274ENST00000642018 RIMBP3CA6NJZ7 1639 aa12.11□□□□□ -0.47
CASC19-274ENST00000642018 RIMBP3BA6NNM3 1639 aa12.11□□□□□ -0.47
CASC19-274ENST00000642018 RIMBP3Q9UFD9 1639 aa12.11□□□□□ -0.47
CASC19-274ENST00000642018 IFT140Q96RY7 1462 aa12.1□□□□□ -0.47
CASC19-274ENST00000642018 DCAF8Q5TAQ9 597 aa12.1□□□□□ -0.47
CASC19-274ENST00000642018 ARHGEF11O15085 1522 aa12.07□□□□□ -0.48
CASC19-274ENST00000642018 TOP2AP11388 1531 aaKnown RBP12.07□□□□□ -0.48
CASC19-274ENST00000642018 ABCC8Q09428 1581 aa12.07□□□□□ -0.48
CASC19-274ENST00000642018 RSF1Q96T23 1441 aaPredicted RBP12.06□□□□□ -0.48
CASC19-274ENST00000642018 CYB5RLQ6IPT4 315 aa12.06□□□□□ -0.48
CASC19-274ENST00000642018 TAOK2Q9UL54 1235 aa12.06□□□□□ -0.48
CASC19-274ENST00000642018 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
CASC19-274ENST00000642018 ZNF608Q9ULD9 1512 aaPredicted RBP12.01□□□□□ -0.49
CASC19-274ENST00000642018 NUBP1P53384 320 aa12.01□□□□□ -0.49
CASC19-274ENST00000642018 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.01□□□□□ -0.49
CASC19-274ENST00000642018 TOPBP1Q92547 1522 aa11.99□□□□□ -0.49
CASC19-274ENST00000642018 RGL2O15211 777 aa11.95□□□□□ -0.5
CASC19-274ENST00000642018 MNX1P50219 401 aaPredicted RBP11.95□□□□□ -0.5
CASC19-274ENST00000642018 EIF4G3O43432 1585 aaKnown RBP11.94□□□□□ -0.5
CASC19-274ENST00000642018 PRKAR2AP13861 404 aaKnown RBP11.94□□□□□ -0.5
CASC19-274ENST00000642018 CHADLQ6NUI6 762 aa11.94□□□□□ -0.5
CASC19-274ENST00000642018 CCDC88BA6NC98 1476 aa11.94□□□□□ -0.5
CASC19-274ENST00000642018 DNMBPQ6XZF7 1577 aa11.92□□□□□ -0.5
CASC19-274ENST00000642018 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
CASC19-274ENST00000642018 PLCB2Q00722 1185 aa11.92□□□□□ -0.5
CASC19-274ENST00000642018 FARP1Q9Y4F1 1045 aaPredicted RBP11.92□□□□□ -0.5
CASC19-274ENST00000642018 AQRO60306 1485 aaKnown RBP eCLIP11.91□□□□□ -0.53e-6■■■■□ 24.7
CASC19-274ENST00000642018 ARAP1Q96P48 1450 aa11.91□□□□□ -0.5
CASC19-274ENST00000642018 BBXQ8WY36 941 aaPredicted RBP11.91□□□□□ -0.5
CASC19-274ENST00000642018 SP7Q8TDD2 431 aaPredicted RBP11.9□□□□□ -0.5
CASC19-274ENST00000642018 RASEFQ8IZ41 740 aa11.89□□□□□ -0.51
CASC19-274ENST00000642018 CHD1O14646 1710 aa11.89□□□□□ -0.51
CASC19-274ENST00000642018 CHGAP10645 457 aaKnown RBP11.88□□□□□ -0.51
CASC19-274ENST00000642018 FXR2P51116 673 aaKnown RBP eCLIP11.88□□□□□ -0.51
CASC19-274ENST00000642018 TARBP1Q13395 1621 aaKnown RBP11.88□□□□□ -0.51
CASC19-274ENST00000642018 RIOK3O14730 519 aaKnown RBP11.86□□□□□ -0.51
CASC19-274ENST00000642018 CHMP7Q8WUX9 453 aaPredicted RBP11.85□□□□□ -0.51
CASC19-274ENST00000642018 TSPYL2Q9H2G4 693 aaPredicted RBP11.85□□□□□ -0.51
CASC19-274ENST00000642018 POLA1P09884 1462 aaPredicted RBP11.84□□□□□ -0.51
CASC19-274ENST00000642018 CHRM1P11229 460 aaPredicted RBP11.84□□□□□ -0.51
CASC19-274ENST00000642018 WDR97A6NE52 1622 aa11.84□□□□□ -0.51
CASC19-274ENST00000642018 SOGA1O94964 1423 aa11.84□□□□□ -0.51
CASC19-274ENST00000642018 HAP1P54257 671 aaPredicted RBP11.83□□□□□ -0.52
CASC19-274ENST00000642018 PIP4P2Q8N4L2 257 aa11.82□□□□□ -0.52
CASC19-274ENST00000642018 TDRD9Q8NDG6 1382 aaKnown RBP11.81□□□□□ -0.52
CASC19-274ENST00000642018 SYNJ1O43426 1573 aa11.81□□□□□ -0.52
CASC19-274ENST00000642018 VGFO15240 615 aaPredicted RBP11.81□□□□□ -0.52
CASC19-274ENST00000642018 PYGBP11216 843 aa11.81□□□□□ -0.52
CASC19-274ENST00000642018 MAGI1Q96QZ7 1491 aaPredicted RBP11.81□□□□□ -0.52
CASC19-274ENST00000642018 CLASP1Q7Z460 1538 aa11.78□□□□□ -0.52
CASC19-274ENST00000642018 CFAP44Q96MT7 982 aa11.78□□□□□ -0.52
CASC19-274ENST00000642018 SNAPC4Q5SXM2 1469 aa11.77□□□□□ -0.52
CASC19-274ENST00000642018 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.53
CASC19-274ENST00000642018 HS6ST3Q8IZP7 471 aa11.77□□□□□ -0.53
CASC19-274ENST00000642018 SPRYD3Q8NCJ5 442 aa11.77□□□□□ -0.53
CASC19-274ENST00000642018 GRIN2BQ13224 1484 aa11.76□□□□□ -0.53
CASC19-274ENST00000642018 RAD54L2Q9Y4B4 1467 aa11.76□□□□□ -0.53
CASC19-274ENST00000642018 ZNF467Q7Z7K2 595 aaPredicted RBP11.76□□□□□ -0.53
CASC19-274ENST00000642018 SYNJ2O15056 1496 aa11.76□□□□□ -0.53
CASC19-274ENST00000642018 STK25O00506 426 aa11.74□□□□□ -0.53
CASC19-274ENST00000642018 GAPVD1Q14C86 1478 aa11.72□□□□□ -0.53
CASC19-274ENST00000642018 FGD5Q6ZNL6 1462 aa11.72□□□□□ -0.53
CASC19-274ENST00000642018 RNF25Q96BH1 459 aaPredicted RBP11.72□□□□□ -0.53
CASC19-274ENST00000642018 RYDENQ9NUL5 291 aaKnown RBP11.69□□□□□ -0.54
CASC19-274ENST00000642018 STK24Q9Y6E0 443 aa11.68□□□□□ -0.54
CASC19-274ENST00000642018 SGIP1Q9BQI5 828 aa11.67□□□□□ -0.54
CASC19-274ENST00000642018 HAX1O00165 279 aa11.66□□□□□ -0.54
CASC19-274ENST00000642018 CCDC61Q9Y6R9 512 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms