RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 MTUS2Q5JR59 1369 aa23.74■■□□□ 1.39
FARP1-242ENST00000627049 TIMELESSQ9UNS1 1208 aa23.73■■□□□ 1.39
FARP1-242ENST00000627049 CCDC88BA6NC98 1476 aa23.73■■□□□ 1.39
FARP1-242ENST00000627049 BAZ1AQ9NRL2 1556 aaPredicted RBP23.71■■□□□ 1.39
FARP1-242ENST00000627049 MROH2BQ7Z745 1585 aa23.68■■□□□ 1.38
FARP1-242ENST00000627049 DEKP35659 375 aaKnown RBP23.68■■□□□ 1.38
FARP1-242ENST00000627049 B4GALNT3Q6L9W6 998 aa23.67■■□□□ 1.38
FARP1-242ENST00000627049 NACADO15069 1562 aa23.67■■□□□ 1.38
FARP1-242ENST00000627049 ZNF777Q9ULD5 760 aaPredicted RBP23.66■■□□□ 1.38
FARP1-242ENST00000627049 ABCC8Q09428 1581 aa23.66■■□□□ 1.38
FARP1-242ENST00000627049 GLIPR1L2Q4G1C9 344 aa23.63■■□□□ 1.37
FARP1-242ENST00000627049 DDRGK1Q96HY6 314 aa23.62■■□□□ 1.37
FARP1-242ENST00000627049 RRP7BPQ9NSQ0 103 aa23.62■■□□□ 1.37
FARP1-242ENST00000627049 UPF2Q9HAU5 1272 aaKnown RBP23.6■■□□□ 1.37
FARP1-242ENST00000627049 KANK4Q5T7N3 995 aaPredicted RBP23.59■■□□□ 1.37
FARP1-242ENST00000627049 PPM1GO15355 546 aaPredicted RBP23.59■■□□□ 1.37
FARP1-242ENST00000627049 ERICH6BQ5W0A0 696 aa23.59■■□□□ 1.37
FARP1-242ENST00000627049 KIF27Q86VH2 1401 aa23.58■■□□□ 1.37
FARP1-242ENST00000627049 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.58■■□□□ 1.37
FARP1-242ENST00000627049 SETD5Q9C0A6 1442 aa23.54■■□□□ 1.36
FARP1-242ENST00000627049 NEFMP07197 916 aa23.52■■□□□ 1.36
FARP1-242ENST00000627049 KCNH8Q96L42 1107 aa23.51■■□□□ 1.35
FARP1-242ENST00000627049 RTN4Q9NQC3 1192 aaKnown RBP23.5■■□□□ 1.35
FARP1-242ENST00000627049 DHX57Q6P158 1386 aaKnown RBP23.5■■□□□ 1.35
FARP1-242ENST00000627049 LAS1LQ9Y4W2 734 aaKnown RBP23.5■■□□□ 1.35
FARP1-242ENST00000627049 RAB3GAP2Q9H2M9 1393 aa23.49■■□□□ 1.35
FARP1-242ENST00000627049 SENP3-EIF4A1A0A087X0R7 540 aa23.49■■□□□ 1.35
FARP1-242ENST00000627049 ANP32BQ92688 251 aaKnown RBP23.46■■□□□ 1.35
FARP1-242ENST00000627049 KDM2AQ9Y2K7 1162 aa23.45■■□□□ 1.34
FARP1-242ENST00000627049 WDR43Q15061 677 aaKnown RBP eCLIP23.43■■□□□ 1.34
FARP1-242ENST00000627049 ARXQ96QS3 562 aa23.42■■□□□ 1.34
FARP1-242ENST00000627049 PPP1R15AO75807 674 aaPredicted RBP23.42■■□□□ 1.34
FARP1-242ENST00000627049 BAZ1BQ9UIG0 1483 aaKnown RBP23.4■■□□□ 1.34
FARP1-242ENST00000627049 HSP90AA1P07900 732 aaKnown RBP23.39■■□□□ 1.34
FARP1-242ENST00000627049 FBLN2P98095 1184 aa23.39■■□□□ 1.33
FARP1-242ENST00000627049 WIZO95785 1651 aa23.39■■□□□ 1.33
FARP1-242ENST00000627049 HSPA5P11021 654 aaKnown RBP23.36■■□□□ 1.33
FARP1-242ENST00000627049 FHAD1B1AJZ9 1412 aa23.35■■□□□ 1.33
FARP1-242ENST00000627049 BECN1Q14457 450 aa23.34■■□□□ 1.33
FARP1-242ENST00000627049 FANCIQ9NVI1 1328 aa23.3■■□□□ 1.32
FARP1-242ENST00000627049 RUSC2Q8N2Y8 1516 aa23.29■■□□□ 1.32
FARP1-242ENST00000627049 TSPY4P0CV99 314 aa23.26■■□□□ 1.31
FARP1-242ENST00000627049 TSPY10P0CW01 314 aa23.26■■□□□ 1.31
FARP1-242ENST00000627049 TOP2AP11388 1531 aaKnown RBP23.26■■□□□ 1.31
FARP1-242ENST00000627049 IPO9Q96P70 1041 aaKnown RBP23.25■■□□□ 1.31
FARP1-242ENST00000627049 CARD11Q9BXL7 1154 aa23.24■■□□□ 1.31
FARP1-242ENST00000627049 RAPGEF2Q9Y4G8 1499 aa23.23■■□□□ 1.31
FARP1-242ENST00000627049 CARMIL1Q5VZK9 1371 aa23.19■■□□□ 1.3
FARP1-242ENST00000627049 ARHGAP35Q9NRY4 1499 aa23.19■■□□□ 1.3
FARP1-242ENST00000627049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.17■■□□□ 1.32e-7■■□□□ 12.2
FARP1-242ENST00000627049 TCERG1O14776 1098 aaKnown RBP23.15■■□□□ 1.3
FARP1-242ENST00000627049 RGS3P49796 1198 aa23.15■■□□□ 1.3
FARP1-242ENST00000627049 TRIM44Q96DX7 344 aaPredicted RBP23.13■■□□□ 1.29
FARP1-242ENST00000627049 NUDCQ9Y266 331 aa23.12■■□□□ 1.29
FARP1-242ENST00000627049 CUX2O14529 1486 aa23.1■■□□□ 1.29
FARP1-242ENST00000627049 RGL3Q3MIN7 710 aa23.07■■□□□ 1.28
FARP1-242ENST00000627049 RCAN3Q9UKA8 241 aa23.05■■□□□ 1.28
FARP1-242ENST00000627049 NAP1L5Q96NT1 182 aaPredicted RBP23.04■■□□□ 1.28
FARP1-242ENST00000627049 KNSTRNQ9Y448 316 aa23.04■■□□□ 1.28
FARP1-242ENST00000627049 CFDP1Q9UEE9 299 aaPredicted RBP23.04■■□□□ 1.28
FARP1-242ENST00000627049 FOXD1Q16676 465 aa22.99■■□□□ 1.27
FARP1-242ENST00000627049 MPHOSPH9Q99550 1183 aa22.99■■□□□ 1.27
FARP1-242ENST00000627049 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.99■■□□□ 1.27
FARP1-242ENST00000627049 USP35Q9P2H5 1018 aa22.99■■□□□ 1.27
FARP1-242ENST00000627049 CC2D1BQ5T0F9 858 aaKnown RBP22.98■■□□□ 1.27
FARP1-242ENST00000627049 ZBED9Q6R2W3 1325 aa22.98■■□□□ 1.27
FARP1-242ENST00000627049 FMN1Q68DA7 1419 aa22.98■■□□□ 1.27
FARP1-242ENST00000627049 L3MBTL2Q969R5 705 aa22.98■■□□□ 1.27
FARP1-242ENST00000627049 CHGAP10645 457 aaKnown RBP22.97■■□□□ 1.27
FARP1-242ENST00000627049 PRKRIP1Q9H875 184 aaPredicted RBP22.97■■□□□ 1.27
FARP1-242ENST00000627049 GOLGA6L22H0YM25 854 aa22.96■■□□□ 1.27
FARP1-242ENST00000627049 CDCA8Q53HL2 280 aa22.96■■□□□ 1.27
FARP1-242ENST00000627049 L1TD1Q5T7N2 865 aaKnown RBP22.95■■□□□ 1.26
FARP1-242ENST00000627049 RALBP1Q15311 655 aa22.91■■□□□ 1.26
FARP1-242ENST00000627049 DCAF11Q8TEB1 546 aa22.9■■□□□ 1.26
FARP1-242ENST00000627049 PLEKHD1A6NEE1 506 aa22.89■■□□□ 1.26
FARP1-242ENST00000627049 KIF21BO75037 1637 aa22.88■■□□□ 1.25
FARP1-242ENST00000627049 FRAT1Q92837 279 aaPredicted RBP22.87■■□□□ 1.25
FARP1-242ENST00000627049 KTN1Q86UP2 1357 aaKnown RBP22.86■■□□□ 1.25
FARP1-242ENST00000627049 PDE4AP27815 886 aa22.86■■□□□ 1.25
FARP1-242ENST00000627049 SLC24A1O60721 1099 aa22.84■■□□□ 1.25
FARP1-242ENST00000627049 SMARCA4P51532 1647 aa22.84■■□□□ 1.25
FARP1-242ENST00000627049 PDE3BQ13370 1112 aa22.84■■□□□ 1.25
FARP1-242ENST00000627049 MYH16Q9H6N6 1097 aa22.84■■□□□ 1.25
FARP1-242ENST00000627049 FTSJ3Q8IY81 847 aaKnown RBP22.83■■□□□ 1.25
FARP1-242ENST00000627049 NEUROD2Q15784 382 aa22.83■■□□□ 1.24
FARP1-242ENST00000627049 SMARCA2P51531 1590 aa22.82■■□□□ 1.24
FARP1-242ENST00000627049 TMF1P82094 1093 aa22.82■■□□□ 1.24
FARP1-242ENST00000627049 PKD2Q13563 968 aa22.81■■□□□ 1.24
FARP1-242ENST00000627049 NCLP19338 710 aaKnown RBP22.8■■□□□ 1.24
FARP1-242ENST00000627049 CFAP53Q96M91 514 aa22.78■■□□□ 1.24
FARP1-242ENST00000627049 GSE1Q14687 1217 aa22.78■■□□□ 1.24
FARP1-242ENST00000627049 CHMP7Q8WUX9 453 aaPredicted RBP22.78■■□□□ 1.24
FARP1-242ENST00000627049 FHOD3Q2V2M9 1422 aa22.78■■□□□ 1.24
FARP1-242ENST00000627049 RRBP1Q9P2E9 1410 aaKnown RBP22.76■■□□□ 1.23
FARP1-242ENST00000627049 NLRP13Q86W25 1043 aa22.76■■□□□ 1.23
FARP1-242ENST00000627049 EXOC6Q8TAG9 804 aa22.75■■□□□ 1.23
FARP1-242ENST00000627049 CCDC18Q5T9S5 1454 aa22.75■■□□□ 1.23
FARP1-242ENST00000627049 SLKQ9H2G2 1235 aaPredicted RBP22.75■■□□□ 1.23
FARP1-242ENST00000627049 ROCK2O75116 1388 aaKnown RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms