RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 FAM9BQ8IZU0 186 aa8.54□□□□□ -1.04
DMD-228ENST00000541735 ANO8Q9HCE9 1232 aaPredicted RBP8.53□□□□□ -1.04
DMD-228ENST00000541735 PHF23Q9BUL5 403 aaPredicted RBP8.52□□□□□ -1.05
DMD-228ENST00000541735 LAS1LQ9Y4W2 734 aaKnown RBP8.51□□□□□ -1.05
DMD-228ENST00000541735 GOLGA2Q08379 1002 aa8.5□□□□□ -1.05
DMD-228ENST00000541735 ZNF330Q9Y3S2 320 aaPredicted RBP8.49□□□□□ -1.05
DMD-228ENST00000541735 NAP1L2Q9ULW6 460 aaPredicted RBP8.49□□□□□ -1.05
DMD-228ENST00000541735 CHMP7Q8WUX9 453 aaPredicted RBP8.48□□□□□ -1.05
DMD-228ENST00000541735 KLHL34Q8N239 644 aa8.48□□□□□ -1.05
DMD-228ENST00000541735 KRI1Q8N9T8 703 aaKnown RBP8.48□□□□□ -1.05
DMD-228ENST00000541735 UPF2Q9HAU5 1272 aaKnown RBP8.48□□□□□ -1.05
DMD-228ENST00000541735 ANP32AP39687 249 aaKnown RBP8.47□□□□□ -1.05
DMD-228ENST00000541735 WDR43Q15061 677 aaKnown RBP eCLIP8.47□□□□□ -1.05
DMD-228ENST00000541735 MYH16Q9H6N6 1097 aa8.47□□□□□ -1.05
DMD-228ENST00000541735 PDE4CQ08493 712 aa8.45□□□□□ -1.06
DMD-228ENST00000541735 RGL3Q3MIN7 710 aa8.45□□□□□ -1.06
DMD-228ENST00000541735 TNNT2P45379 298 aaPredicted RBP8.44□□□□□ -1.06
DMD-228ENST00000541735 NBR1Q14596 966 aa8.44□□□□□ -1.06
DMD-228ENST00000541735 FBXO3Q9UK99 471 aa8.42□□□□□ -1.06
DMD-228ENST00000541735 HIRIP3Q9BW71 556 aaPredicted RBP8.42□□□□□ -1.06
DMD-228ENST00000541735 NEUROD2Q15784 382 aa8.42□□□□□ -1.06
DMD-228ENST00000541735 MSH5O43196 834 aa8.41□□□□□ -1.06
DMD-228ENST00000541735 NCLP19338 710 aaKnown RBP8.41□□□□□ -1.06
DMD-228ENST00000541735 OS9Q13438 667 aaPredicted RBP8.4□□□□□ -1.07
DMD-228ENST00000541735 IRX6P78412 446 aaPredicted RBP8.39□□□□□ -1.07
DMD-228ENST00000541735 TSPY4P0CV99 314 aa8.39□□□□□ -1.07
DMD-228ENST00000541735 TSPY10P0CW01 314 aa8.39□□□□□ -1.07
DMD-228ENST00000541735 HNRNPUQ00839 825 aaKnown RBP eCLIP8.39□□□□□ -1.07
DMD-228ENST00000541735 ZRSR1Q15695 479 aaKnown RBP8.39□□□□□ -1.07
DMD-228ENST00000541735 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.39□□□□□ -1.07
DMD-228ENST00000541735 PAK3O75914 559 aaPredicted RBP8.39□□□□□ -1.07
DMD-228ENST00000541735 SAFB2Q14151 953 aaKnown RBP eCLIP8.38□□□□□ -1.07
DMD-228ENST00000541735 G3V3G9 751 aa8.38□□□□□ -1.07
DMD-228ENST00000541735 DCAF8Q5TAQ9 597 aa8.38□□□□□ -1.07
DMD-228ENST00000541735 POGKQ9P215 609 aa8.37□□□□□ -1.07
DMD-228ENST00000541735 GTF3C3Q9Y5Q9 886 aa8.37□□□□□ -1.07
DMD-228ENST00000541735 FGD1P98174 961 aa8.37□□□□□ -1.07
DMD-228ENST00000541735 CSB-PGBD3P0DP91 1061 aa8.36□□□□□ -1.07
DMD-228ENST00000541735 PLCB2Q00722 1185 aa8.36□□□□□ -1.07
DMD-228ENST00000541735 WWC1Q8IX03 1113 aa8.36□□□□□ -1.07
DMD-228ENST00000541735 TMX4Q9H1E5 349 aaPredicted RBP8.36□□□□□ -1.07
DMD-228ENST00000541735 DDX10Q13206 875 aaKnown RBP8.35□□□□□ -1.07
DMD-228ENST00000541735 TONSLQ96HA7 1378 aa8.35□□□□□ -1.07
DMD-228ENST00000541735 FKBP8Q14318 412 aa8.34□□□□□ -1.07
DMD-228ENST00000541735 RRP7BPQ9NSQ0 103 aa8.33□□□□□ -1.08
DMD-228ENST00000541735 MEX3CQ5U5Q3 659 aaKnown RBP8.33□□□□□ -1.08
DMD-228ENST00000541735 KCNJ4P48050 445 aa8.32□□□□□ -1.08
DMD-228ENST00000541735 CCDC136Q96JN2 1154 aa8.31□□□□□ -1.08
DMD-228ENST00000541735 ERICH6BQ5W0A0 696 aa8.3□□□□□ -1.08
DMD-228ENST00000541735 U2SURPO15042 1029 aaKnown RBP8.3□□□□□ -1.08
DMD-228ENST00000541735 DCAF8L1A6NGE4 600 aa8.29□□□□□ -1.08
DMD-228ENST00000541735 STK26Q9P289 416 aa8.29□□□□□ -1.08
DMD-228ENST00000541735 CNKSR2Q8WXI2 1034 aa8.29□□□□□ -1.08
DMD-228ENST00000541735 VPS53Q5VIR6 699 aa8.28□□□□□ -1.08
DMD-228ENST00000541735 PTMAP06454 111 aaKnown RBP8.28□□□□□ -1.08
DMD-228ENST00000541735 PPP1R1BQ9UD71 204 aaPredicted RBP8.27□□□□□ -1.08
DMD-228ENST00000541735 FTSJ3Q8IY81 847 aaKnown RBP8.27□□□□□ -1.09
DMD-228ENST00000541735 APBB1O00213 710 aa8.27□□□□□ -1.09
DMD-228ENST00000541735 CHMP3Q9Y3E7 222 aa8.27□□□□□ -1.09
DMD-228ENST00000541735 MRS2Q9HD23 443 aa8.26□□□□□ -1.09
DMD-228ENST00000541735 DNTTIP2Q5QJE6 756 aaKnown RBP8.26□□□□□ -1.09
DMD-228ENST00000541735 NUTM2FA1L443 756 aa8.26□□□□□ -1.09
DMD-228ENST00000541735 RAD21O60216 631 aa8.26□□□□□ -1.09
DMD-228ENST00000541735 FRAT1Q92837 279 aaPredicted RBP8.25□□□□□ -1.09
DMD-228ENST00000541735 MAPK8IP3Q9UPT6 1336 aa8.25□□□□□ -1.09
DMD-228ENST00000541735 SAMD1Q6SPF0 538 aaPredicted RBP8.24□□□□□ -1.09
DMD-228ENST00000541735 CASC1Q6TDU7 716 aa8.24□□□□□ -1.09
DMD-228ENST00000541735 CFAP53Q96M91 514 aa8.24□□□□□ -1.09
DMD-228ENST00000541735 GTF2E1P29083 439 aaPredicted RBP8.23□□□□□ -1.09
DMD-228ENST00000541735 TRIM44Q96DX7 344 aaPredicted RBP8.23□□□□□ -1.09
DMD-228ENST00000541735 FBXW7Q969H0 707 aa8.23□□□□□ -1.09
DMD-228ENST00000541735 PLEKHD1A6NEE1 506 aa8.23□□□□□ -1.09
DMD-228ENST00000541735 SRPK2P78362 688 aaKnown RBP8.23□□□□□ -1.09
DMD-228ENST00000541735 GNL2Q13823 731 aaKnown RBP8.23□□□□□ -1.09
DMD-228ENST00000541735 GGT6Q6P531 493 aa8.22□□□□□ -1.09
DMD-228ENST00000541735 ERCC6Q03468 1493 aa8.22□□□□□ -1.09
DMD-228ENST00000541735 CWC22Q9HCG8 908 aaKnown RBP8.22□□□□□ -1.09
DMD-228ENST00000541735 FRAT2O75474 233 aaPredicted RBP8.22□□□□□ -1.09
DMD-228ENST00000541735 CC2D1BQ5T0F9 858 aaKnown RBP8.21□□□□□ -1.1
DMD-228ENST00000541735 EIF4G2P78344 907 aaKnown RBP eCLIP8.21□□□□□ -1.12e-7■■■□□ 16.3
DMD-228ENST00000541735 NUTM2DQ5VT03 806 aaPredicted RBP8.21□□□□□ -1.1
DMD-228ENST00000541735 LTV1Q96GA3 475 aaPredicted RBP8.21□□□□□ -1.1
DMD-228ENST00000541735 CREBRFQ8IUR6 639 aa8.2□□□□□ -1.1
DMD-228ENST00000541735 MTUS2Q5JR59 1369 aa8.19□□□□□ -1.1
DMD-228ENST00000541735 TAF7LQ5H9L4 462 aa8.19□□□□□ -1.1
DMD-228ENST00000541735 KNSTRNQ9Y448 316 aa8.19□□□□□ -1.1
DMD-228ENST00000541735 CSRNP3Q8WYN3 585 aa8.19□□□□□ -1.1
DMD-228ENST00000541735 SPRYD3Q8NCJ5 442 aa8.18□□□□□ -1.1
DMD-228ENST00000541735 SYTL4Q96C24 671 aaPredicted RBP8.18□□□□□ -1.1
DMD-228ENST00000541735 GORABQ5T7V8 394 aa8.17□□□□□ -1.1
DMD-228ENST00000541735 NOC3LQ8WTT2 800 aaKnown RBP8.17□□□□□ -1.1
DMD-228ENST00000541735 RTF1Q92541 710 aaKnown RBP8.17□□□□□ -1.1
DMD-228ENST00000541735 EVA1CP58658 441 aa8.17□□□□□ -1.1
DMD-228ENST00000541735 RGS3P49796 1198 aa8.16□□□□□ -1.1
DMD-228ENST00000541735 GOLGA6L22H0YM25 854 aa8.15□□□□□ -1.1
DMD-228ENST00000541735 TOMM22Q9NS69 142 aa8.15□□□□□ -1.1
DMD-228ENST00000541735 PNNQ9H307 717 aaKnown RBP8.15□□□□□ -1.1
DMD-228ENST00000541735 NUDCQ9Y266 331 aa8.15□□□□□ -1.1
DMD-228ENST00000541735 GOLGA6L4A6NEF3 574 aa8.15□□□□□ -1.11
DMD-228ENST00000541735 NGEFQ8N5V2 710 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms