RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 GTPBP6O43824 516 aaPredicted RBP7.73□□□□□ -1.17
C11orf54-213ENST00000533585 TRIM41Q8WV44 630 aa7.73□□□□□ -1.17
C11orf54-213ENST00000533585 DCAF8L1A6NGE4 600 aa7.72□□□□□ -1.17
C11orf54-213ENST00000533585 CCDC9Q9Y3X0 531 aaKnown RBP7.72□□□□□ -1.17
C11orf54-213ENST00000533585 NKX1-1Q15270 411 aaPredicted RBP7.71□□□□□ -1.18
C11orf54-213ENST00000533585 ARID3AQ99856 593 aa7.71□□□□□ -1.18
C11orf54-213ENST00000533585 ZBTB7CA1YPR0 619 aa7.69□□□□□ -1.18
C11orf54-213ENST00000533585 TRHP20396 242 aaPredicted RBP7.69□□□□□ -1.18
C11orf54-213ENST00000533585 MIER1Q8N108 512 aa7.69□□□□□ -1.18
C11orf54-213ENST00000533585 PELP1Q8IZL8 1130 aaKnown RBP7.68□□□□□ -1.18
C11orf54-213ENST00000533585 SLC24A3Q9HC58 644 aa7.66□□□□□ -1.18
C11orf54-213ENST00000533585 ZC3H15Q8WU90 426 aaKnown RBP7.65□□□□□ -1.18
C11orf54-213ENST00000533585 PDIA4P13667 645 aaKnown RBP7.63□□□□□ -1.19
C11orf54-213ENST00000533585 WDR70Q9NW82 654 aa7.63□□□□□ -1.19
C11orf54-213ENST00000533585 ZBTB47Q9UFB7 747 aaPredicted RBP7.62□□□□□ -1.19
C11orf54-213ENST00000533585 KCNV2Q8TDN2 545 aa7.61□□□□□ -1.19
C11orf54-213ENST00000533585 RNF25Q96BH1 459 aaPredicted RBP7.61□□□□□ -1.19
C11orf54-213ENST00000533585 PLEKHG5O94827 1062 aa7.6□□□□□ -1.19
C11orf54-213ENST00000533585 RYDENQ9NUL5 291 aaKnown RBP7.6□□□□□ -1.19
C11orf54-213ENST00000533585 STK25O00506 426 aa7.58□□□□□ -1.2
C11orf54-213ENST00000533585 MYT1Q01538 1121 aa7.58□□□□□ -1.2
C11orf54-213ENST00000533585 RIOK3O14730 519 aaKnown RBP7.57□□□□□ -1.2
C11orf54-213ENST00000533585 C1orf115Q9H7X2 142 aa7.56□□□□□ -1.2
C11orf54-213ENST00000533585 TTBK1Q5TCY1 1321 aaPredicted RBP7.55□□□□□ -1.2
C11orf54-213ENST00000533585 POLA2Q14181 598 aa7.55□□□□□ -1.2
C11orf54-213ENST00000533585 GSE1Q14687 1217 aa7.55□□□□□ -1.2
C11orf54-213ENST00000533585 APBB1O00213 710 aa7.52□□□□□ -1.21
C11orf54-213ENST00000533585 ARID3CA6NKF2 412 aa7.51□□□□□ -1.21
C11orf54-213ENST00000533585 VGFO15240 615 aaPredicted RBP7.51□□□□□ -1.21
C11orf54-213ENST00000533585 NECTIN2Q92692 538 aa7.51□□□□□ -1.21
C11orf54-213ENST00000533585 IL27Q8NEV9 243 aa7.5□□□□□ -1.21
C11orf54-213ENST00000533585 ZMYND10O75800 440 aa7.49□□□□□ -1.21
C11orf54-213ENST00000533585 ZNF692Q9BU19 519 aaPredicted RBP7.49□□□□□ -1.21
C11orf54-213ENST00000533585 LOC105371045A0A1W2PR82 267 aa7.48□□□□□ -1.21
C11orf54-213ENST00000533585 ZBTB12Q9Y330 459 aaPredicted RBP7.48□□□□□ -1.21
C11orf54-213ENST00000533585 STK24Q9Y6E0 443 aa7.48□□□□□ -1.21
C11orf54-213ENST00000533585 ARHGEF1Q92888 912 aaKnown RBP7.46□□□□□ -1.22
C11orf54-213ENST00000533585 GPBP1L1Q9HC44 474 aaPredicted RBP7.46□□□□□ -1.22
C11orf54-213ENST00000533585 SHROOM4Q9ULL8 1493 aa7.45□□□□□ -1.22
C11orf54-213ENST00000533585 KCTD17Q8N5Z5 321 aa7.45□□□□□ -1.22
C11orf54-213ENST00000533585 BCL11BQ9C0K0 894 aaPredicted RBP7.45□□□□□ -1.22
C11orf54-213ENST00000533585 TESPA1A2RU30 521 aaPredicted RBP7.44□□□□□ -1.22
C11orf54-213ENST00000533585 CADPS2Q86UW7 1296 aa7.44□□□□□ -1.22
C11orf54-213ENST00000533585 SEMA3EO15041 775 aa7.43□□□□□ -1.22
C11orf54-213ENST00000533585 DCAF8Q5TAQ9 597 aa7.43□□□□□ -1.22
C11orf54-213ENST00000533585 AK7Q96M32 723 aa7.43□□□□□ -1.22
C11orf54-213ENST00000533585 BARGINQ6ZT62 677 aa7.42□□□□□ -1.22
C11orf54-213ENST00000533585 RAD21O60216 631 aa7.41□□□□□ -1.22
C11orf54-213ENST00000533585 MKRN3Q13064 507 aaKnown RBP7.41□□□□□ -1.22
C11orf54-213ENST00000533585 SMYD5Q6GMV2 418 aa7.41□□□□□ -1.22
C11orf54-213ENST00000533585 PABPN1Q86U42 306 aaKnown RBP eCLIP7.41□□□□□ -1.22
C11orf54-213ENST00000533585 SGIP1Q9BQI5 828 aa7.41□□□□□ -1.22
C11orf54-213ENST00000533585 KDM4CQ9H3R0 1056 aa7.4□□□□□ -1.22
C11orf54-213ENST00000533585 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.39□□□□□ -1.23
C11orf54-213ENST00000533585 FLIIQ13045 1269 aa7.39□□□□□ -1.23
C11orf54-213ENST00000533585 ZFP91Q96JP5 570 aaPredicted RBP7.39□□□□□ -1.23
C11orf54-213ENST00000533585 CCDC82Q8N4S0 544 aa7.38□□□□□ -1.23
C11orf54-213ENST00000533585 KRI1Q8N9T8 703 aaKnown RBP7.37□□□□□ -1.23
C11orf54-213ENST00000533585 IGSF3O75054 1194 aa7.36□□□□□ -1.23
C11orf54-213ENST00000533585 HMGB1P09429 215 aaKnown RBP7.36□□□□□ -1.23
C11orf54-213ENST00000533585 E2F4Q16254 413 aa7.36□□□□□ -1.23
C11orf54-213ENST00000533585 TRAIPQ9BWF2 469 aa7.36□□□□□ -1.23
C11orf54-213ENST00000533585 SSUH2Q9Y2M2 353 aa7.36□□□□□ -1.23
C11orf54-213ENST00000533585 NUBP1P53384 320 aa7.35□□□□□ -1.23
C11orf54-213ENST00000533585 SPDYE2BA6NHP3 402 aa7.34□□□□□ -1.23
C11orf54-213ENST00000533585 SPDYE6P0CI01 402 aa7.34□□□□□ -1.23
C11orf54-213ENST00000533585 SPDYE2Q495Y8 402 aa7.34□□□□□ -1.23
C11orf54-213ENST00000533585 AEBP1Q8IUX7 1158 aa7.34□□□□□ -1.23
C11orf54-213ENST00000533585 SPINK5Q9NQ38 1064 aaPredicted RBP7.34□□□□□ -1.23
C11orf54-213ENST00000533585 RGS22Q8NE09 1264 aa7.33□□□□□ -1.24
C11orf54-213ENST00000533585 TMCO4Q5TGY1 634 aa7.32□□□□□ -1.24
C11orf54-213ENST00000533585 MTMR7Q9Y216 660 aa7.32□□□□□ -1.24
C11orf54-213ENST00000533585 ZNF316A6NFI3 1004 aaPredicted RBP7.31□□□□□ -1.24
C11orf54-213ENST00000533585 TRAK2O60296 914 aa7.31□□□□□ -1.24
C11orf54-213ENST00000533585 CHRM1P11229 460 aaPredicted RBP7.31□□□□□ -1.24
C11orf54-213ENST00000533585 PDE4DQ08499 809 aa7.31□□□□□ -1.24
C11orf54-213ENST00000533585 FAM212AQ96EL1 285 aa7.31□□□□□ -1.24
C11orf54-213ENST00000533585 A6NJR5 290 aa7.3□□□□□ -1.24
C11orf54-213ENST00000533585 EIF5BO60841 1220 aaKnown RBP7.3□□□□□ -1.24
C11orf54-213ENST00000533585 CAPN15O75808 1086 aa7.3□□□□□ -1.24
C11orf54-213ENST00000533585 TRIM66O15016 1216 aa7.29□□□□□ -1.24
C11orf54-213ENST00000533585 CDK11BP21127 795 aaKnown RBP7.29□□□□□ -1.24
C11orf54-213ENST00000533585 RBM25P49756 843 aaKnown RBP7.29□□□□□ -1.24
C11orf54-213ENST00000533585 CACNB1Q02641 598 aaPredicted RBP7.29□□□□□ -1.24
C11orf54-213ENST00000533585 CDK11AQ9UQ88 783 aaPredicted RBP7.29□□□□□ -1.24
C11orf54-213ENST00000533585 HSP90B1P14625 803 aaKnown RBP7.27□□□□□ -1.25
C11orf54-213ENST00000533585 GPIHBP1Q8IV16 184 aa7.27□□□□□ -1.25
C11orf54-213ENST00000533585 FAM117AQ9C073 453 aa7.27□□□□□ -1.25
C11orf54-213ENST00000533585 MFAP1P55081 439 aaKnown RBP7.26□□□□□ -1.25
C11orf54-213ENST00000533585 CLUAP1Q96AJ1 413 aa7.26□□□□□ -1.25
C11orf54-213ENST00000533585 FOXD4L5Q5VV16 416 aaPredicted RBP7.25□□□□□ -1.25
C11orf54-213ENST00000533585 OSCARQ8IYS5 282 aa7.25□□□□□ -1.25
C11orf54-213ENST00000533585 FOXD4L4Q8WXT5 416 aaPredicted RBP7.25□□□□□ -1.25
C11orf54-213ENST00000533585 GZF1Q9H116 711 aaPredicted RBP7.25□□□□□ -1.25
C11orf54-213ENST00000533585 ABCB7O75027 752 aa7.24□□□□□ -1.25
C11orf54-213ENST00000533585 DDRGK1Q96HY6 314 aa7.24□□□□□ -1.25
C11orf54-213ENST00000533585 CCDC97Q96F63 343 aaPredicted RBP7.23□□□□□ -1.25
C11orf54-213ENST00000533585 SERPINA10Q9UK55 444 aa7.23□□□□□ -1.25
C11orf54-213ENST00000533585 E9PSI1 815 aa7.22□□□□□ -1.25
C11orf54-213ENST00000533585 RBM26Q5T8P6 1007 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms