RNA–Protein interactions for RNA: ENST00000527498.1

PUM1-219, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-219ENST00000527498 SMARCA4P51532 1647 aa7.05□□□□□ -1.28
PUM1-219ENST00000527498 ERICH6Q7L0X2 663 aa7.04□□□□□ -1.28
PUM1-219ENST00000527498 STAG3Q9UJ98 1225 aa7.04□□□□□ -1.28
PUM1-219ENST00000527498 ZBTB12Q9Y330 459 aaPredicted RBP7.04□□□□□ -1.28
PUM1-219ENST00000527498 NBR1Q14596 966 aa7.03□□□□□ -1.28
PUM1-219ENST00000527498 NPM1P06748 294 aaKnown RBP eCLIP7.02□□□□□ -1.29
PUM1-219ENST00000527498 BAZ1BQ9UIG0 1483 aaKnown RBP7.02□□□□□ -1.29
PUM1-219ENST00000527498 PDS5BQ9NTI5 1447 aa7.01□□□□□ -1.29
PUM1-219ENST00000527498 RIMBP3CA6NJZ7 1639 aa7.01□□□□□ -1.29
PUM1-219ENST00000527498 RIMBP3BA6NNM3 1639 aa7.01□□□□□ -1.29
PUM1-219ENST00000527498 RIMBP3Q9UFD9 1639 aa7.01□□□□□ -1.29
PUM1-219ENST00000527498 POLA2Q14181 598 aa7.01□□□□□ -1.29
PUM1-219ENST00000527498 OSCARQ8IYS5 282 aa7□□□□□ -1.29
PUM1-219ENST00000527498 WDR62O43379 1518 aa7□□□□□ -1.29
PUM1-219ENST00000527498 MRC2Q9UBG0 1479 aa6.99□□□□□ -1.29
PUM1-219ENST00000527498 TRHP20396 242 aaPredicted RBP6.98□□□□□ -1.29
PUM1-219ENST00000527498 PLCD3Q8N3E9 789 aa6.98□□□□□ -1.29
PUM1-219ENST00000527498 TSHZ2Q9NRE2 1034 aa6.98□□□□□ -1.29
PUM1-219ENST00000527498 RGL2O15211 777 aa6.96□□□□□ -1.3
PUM1-219ENST00000527498 PEG3Q9GZU2 1588 aa6.95□□□□□ -1.3
PUM1-219ENST00000527498 CHGAP10645 457 aaKnown RBP6.94□□□□□ -1.3
PUM1-219ENST00000527498 ZBTB47Q9UFB7 747 aaPredicted RBP6.94□□□□□ -1.3
PUM1-219ENST00000527498 ARHGEF11O15085 1522 aa6.93□□□□□ -1.3
PUM1-219ENST00000527498 PLEKHG5O94827 1062 aa6.93□□□□□ -1.3
PUM1-219ENST00000527498 CADPSQ9ULU8 1353 aa6.92□□□□□ -1.3
PUM1-219ENST00000527498 MIER1Q8N108 512 aa6.91□□□□□ -1.3
PUM1-219ENST00000527498 CAPN15O75808 1086 aa6.9□□□□□ -1.3
PUM1-219ENST00000527498 ARXQ96QS3 562 aa6.9□□□□□ -1.3
PUM1-219ENST00000527498 CEP164Q9UPV0 1460 aa6.9□□□□□ -1.31
PUM1-219ENST00000527498 POTEHQ6S545 545 aa6.89□□□□□ -1.31
PUM1-219ENST00000527498 ZNF692Q9BU19 519 aaPredicted RBP6.89□□□□□ -1.31
PUM1-219ENST00000527498 CIZ1Q9ULV3 898 aaPredicted RBP6.89□□□□□ -1.31
PUM1-219ENST00000527498 GTF3C3Q9Y5Q9 886 aa6.89□□□□□ -1.31
PUM1-219ENST00000527498 TULP1O00294 542 aaPredicted RBP6.88□□□□□ -1.31
PUM1-219ENST00000527498 SPINK5Q9NQ38 1064 aaPredicted RBP6.88□□□□□ -1.31
PUM1-219ENST00000527498 MROH2BQ7Z745 1585 aa6.87□□□□□ -1.31
PUM1-219ENST00000527498 CYB5RLQ6IPT4 315 aa6.87□□□□□ -1.31
PUM1-219ENST00000527498 HS6ST3Q8IZP7 471 aa6.87□□□□□ -1.31
PUM1-219ENST00000527498 TIMELESSQ9UNS1 1208 aa6.87□□□□□ -1.31
PUM1-219ENST00000527498 FANCD2Q9BXW9 1451 aa6.86□□□□□ -1.31
PUM1-219ENST00000527498 SPDYE2BA6NHP3 402 aa6.85□□□□□ -1.31
PUM1-219ENST00000527498 SPDYE6P0CI01 402 aa6.85□□□□□ -1.31
PUM1-219ENST00000527498 SPDYE2Q495Y8 402 aa6.85□□□□□ -1.31
PUM1-219ENST00000527498 URB2Q14146 1524 aaKnown RBP6.84□□□□□ -1.31
PUM1-219ENST00000527498 ARAP1Q96P48 1450 aa6.84□□□□□ -1.31
PUM1-219ENST00000527498 CHD1O14646 1710 aa6.83□□□□□ -1.32
PUM1-219ENST00000527498 TMEM132AQ24JP5 1023 aa6.82□□□□□ -1.32
PUM1-219ENST00000527498 DAXXQ9UER7 740 aaPredicted RBP6.82□□□□□ -1.32
PUM1-219ENST00000527498 ZNF608Q9ULD9 1512 aaPredicted RBP6.81□□□□□ -1.32
PUM1-219ENST00000527498 WIZO95785 1651 aa6.81□□□□□ -1.32
PUM1-219ENST00000527498 GSE1Q14687 1217 aa6.8□□□□□ -1.32
PUM1-219ENST00000527498 SSUH2Q9Y2M2 353 aa6.8□□□□□ -1.32
PUM1-219ENST00000527498 CFTRP13569 1480 aa6.79□□□□□ -1.32
PUM1-219ENST00000527498 PRDM2Q13029 1718 aa6.79□□□□□ -1.32
PUM1-219ENST00000527498 RYDENQ9NUL5 291 aaKnown RBP6.78□□□□□ -1.32
PUM1-219ENST00000527498 EIF4G3O43432 1585 aaKnown RBP6.78□□□□□ -1.32
PUM1-219ENST00000527498 DSG3P32926 999 aa6.77□□□□□ -1.33
PUM1-219ENST00000527498 IFT140Q96RY7 1462 aa6.77□□□□□ -1.33
PUM1-219ENST00000527498 ABCB7O75027 752 aa6.76□□□□□ -1.33
PUM1-219ENST00000527498 RSF1Q96T23 1441 aaPredicted RBP6.75□□□□□ -1.33
PUM1-219ENST00000527498 P3H3Q8IVL6 736 aa6.74□□□□□ -1.33
PUM1-219ENST00000527498 RIOK3O14730 519 aaKnown RBP6.73□□□□□ -1.33
PUM1-219ENST00000527498 HOMEZQ8IX15 550 aa6.73□□□□□ -1.33
PUM1-219ENST00000527498 MYT1Q01538 1121 aa6.72□□□□□ -1.33
PUM1-219ENST00000527498 GTPBP6O43824 516 aaPredicted RBP6.71□□□□□ -1.34
PUM1-219ENST00000527498 ILDR1Q86SU0 546 aaPredicted RBP6.71□□□□□ -1.34
PUM1-219ENST00000527498 C14orf37Q86TY3 774 aa6.71□□□□□ -1.34
PUM1-219ENST00000527498 TOPBP1Q92547 1522 aa6.71□□□□□ -1.34
PUM1-219ENST00000527498 AQRO60306 1485 aaKnown RBP eCLIP6.7□□□□□ -1.347e-7■■■■■ 30.4
PUM1-219ENST00000527498 TARBP1Q13395 1621 aaKnown RBP6.69□□□□□ -1.34
PUM1-219ENST00000527498 VGFO15240 615 aaPredicted RBP6.69□□□□□ -1.34
PUM1-219ENST00000527498 NKX1-1Q15270 411 aaPredicted RBP6.69□□□□□ -1.34
PUM1-219ENST00000527498 CLASP1Q7Z460 1538 aa6.69□□□□□ -1.34
PUM1-219ENST00000527498 STK25O00506 426 aa6.68□□□□□ -1.34
PUM1-219ENST00000527498 RNF25Q96BH1 459 aaPredicted RBP6.68□□□□□ -1.34
PUM1-219ENST00000527498 TOP2AP11388 1531 aaKnown RBP6.66□□□□□ -1.34
PUM1-219ENST00000527498 DNMBPQ6XZF7 1577 aa6.66□□□□□ -1.34
PUM1-219ENST00000527498 DCAF8Q5TAQ9 597 aa6.66□□□□□ -1.34
PUM1-219ENST00000527498 SYNJ1O43426 1573 aa6.65□□□□□ -1.34
PUM1-219ENST00000527498 KIF13AQ9H1H9 1805 aa6.64□□□□□ -1.35
PUM1-219ENST00000527498 FAM212AQ96EL1 285 aa6.64□□□□□ -1.35
PUM1-219ENST00000527498 SGIP1Q9BQI5 828 aa6.64□□□□□ -1.35
PUM1-219ENST00000527498 ABCC8Q09428 1581 aa6.64□□□□□ -1.35
PUM1-219ENST00000527498 GAPVD1Q14C86 1478 aa6.63□□□□□ -1.35
PUM1-219ENST00000527498 WDR70Q9NW82 654 aa6.63□□□□□ -1.35
PUM1-219ENST00000527498 SNAPC4Q5SXM2 1469 aa6.62□□□□□ -1.35
PUM1-219ENST00000527498 CHRM1P11229 460 aaPredicted RBP6.62□□□□□ -1.35
PUM1-219ENST00000527498 NUBP1P53384 320 aa6.62□□□□□ -1.35
PUM1-219ENST00000527498 POLA1P09884 1462 aaPredicted RBP6.61□□□□□ -1.35
PUM1-219ENST00000527498 PELP1Q8IZL8 1130 aaKnown RBP6.61□□□□□ -1.35
PUM1-219ENST00000527498 RAD54L2Q9Y4B4 1467 aa6.6□□□□□ -1.35
PUM1-219ENST00000527498 LMOD2Q6P5Q4 547 aa6.6□□□□□ -1.35
PUM1-219ENST00000527498 STK24Q9Y6E0 443 aa6.6□□□□□ -1.35
PUM1-219ENST00000527498 TDRD9Q8NDG6 1382 aaKnown RBP6.59□□□□□ -1.35
PUM1-219ENST00000527498 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.59□□□□□ -1.35
PUM1-219ENST00000527498 CHMP7Q8WUX9 453 aaPredicted RBP6.59□□□□□ -1.35
PUM1-219ENST00000527498 BCL11BQ9C0K0 894 aaPredicted RBP6.59□□□□□ -1.35
PUM1-219ENST00000527498 CCDC88BA6NC98 1476 aa6.59□□□□□ -1.36
PUM1-219ENST00000527498 ERCC6L2Q5T890 1561 aa6.58□□□□□ -1.36
PUM1-219ENST00000527498 MAGI1Q96QZ7 1491 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms