RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 Q6ZNB5 142 aa2.96□□□□□ -1.94
SNORA40.16-201ENST00000517238 POTEB3A0JP26 581 aa2.95□□□□□ -1.94
SNORA40.16-201ENST00000517238 PRR29P0C7W0 189 aa2.95□□□□□ -1.94
SNORA40.16-201ENST00000517238 POTEBQ6S5H4 581 aa2.95□□□□□ -1.94
SNORA40.16-201ENST00000517238 POTEFA5A3E0 1075 aa2.94□□□□□ -1.94
SNORA40.16-201ENST00000517238 SNPHO15079 494 aa2.94□□□□□ -1.94
SNORA40.16-201ENST00000517238 PHF12Q96QT6 1004 aa2.93□□□□□ -1.94
SNORA40.16-201ENST00000517238 SEC24BO95487 1268 aa2.9□□□□□ -1.95
SNORA40.16-201ENST00000517238 ATN1P54259 1190 aaPredicted RBP2.89□□□□□ -1.95
SNORA40.16-201ENST00000517238 SUZ12Q15022 739 aaKnown RBP2.89□□□□□ -1.95
SNORA40.16-201ENST00000517238 SPDYE2BA6NHP3 402 aa2.87□□□□□ -1.95
SNORA40.16-201ENST00000517238 PAK3O75914 559 aaPredicted RBP2.87□□□□□ -1.95
SNORA40.16-201ENST00000517238 SPDYE6P0CI01 402 aa2.87□□□□□ -1.95
SNORA40.16-201ENST00000517238 SPDYE2Q495Y8 402 aa2.87□□□□□ -1.95
SNORA40.16-201ENST00000517238 SLC4A2P04920 1241 aa2.86□□□□□ -1.95
SNORA40.16-201ENST00000517238 RGS20O76081 388 aa2.85□□□□□ -1.95
SNORA40.16-201ENST00000517238 PTGER2P43116 358 aa2.85□□□□□ -1.95
SNORA40.16-201ENST00000517238 MS4A3Q96HJ5 214 aa2.85□□□□□ -1.95
SNORA40.16-201ENST00000517238 COLQQ9Y215 455 aaPredicted RBP2.85□□□□□ -1.95
SNORA40.16-201ENST00000517238 KRTAP1-3Q8IUG1 177 aa2.84□□□□□ -1.95
SNORA40.16-201ENST00000517238 NCBP3Q53F19 620 aaKnown RBP2.83□□□□□ -1.96
SNORA40.16-201ENST00000517238 ZNF775Q96BV0 537 aaPredicted RBP2.83□□□□□ -1.96
SNORA40.16-201ENST00000517238 KRTAP4-8Q9BYQ9 185 aa2.83□□□□□ -1.96
SNORA40.16-201ENST00000517238 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.82□□□□□ -1.96
SNORA40.16-201ENST00000517238 KRTAP9-6A0A140TA67 174 aa2.78□□□□□ -1.96
SNORA40.16-201ENST00000517238 KRTAP9-2Q9BYQ4 174 aa2.78□□□□□ -1.96
SNORA40.16-201ENST00000517238 HCSTQ9UBK5 93 aa2.78□□□□□ -1.96
SNORA40.16-201ENST00000517238 ZNF787Q6DD87 383 aa2.77□□□□□ -1.97
SNORA40.16-201ENST00000517238 TRAF7Q6Q0C0 670 aa2.77□□□□□ -1.97
SNORA40.16-201ENST00000517238 NPM3O75607 178 aaKnown RBP2.76□□□□□ -1.97
SNORA40.16-201ENST00000517238 LCE2BO14633 110 aa2.75□□□□□ -1.97
SNORA40.16-201ENST00000517238 BMP2KQ9NSY1 1161 aaPredicted RBP2.75□□□□□ -1.97
SNORA40.16-201ENST00000517238 STK17AQ9UEE5 414 aa2.75□□□□□ -1.97
SNORA40.16-201ENST00000517238 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.73□□□□□ -1.97
SNORA40.16-201ENST00000517238 ERBB3P21860 1342 aa2.72□□□□□ -1.97
SNORA40.16-201ENST00000517238 ZNF692Q9BU19 519 aaPredicted RBP2.72□□□□□ -1.97
SNORA40.16-201ENST00000517238 XP32Q5T750 250 aa2.71□□□□□ -1.98
SNORA40.16-201ENST00000517238 ANKRD13DQ6ZTN6 518 aa2.71□□□□□ -1.98
SNORA40.16-201ENST00000517238 PSMG3-AS1Q96PY0 264 aa2.71□□□□□ -1.98
SNORA40.16-201ENST00000517238 SSUH2Q9Y2M2 353 aa2.71□□□□□ -1.98
SNORA40.16-201ENST00000517238 LCE3BQ5TA77 95 aa2.7□□□□□ -1.98
SNORA40.16-201ENST00000517238 KRTAP4-8A0A0G2JLE6 195 aa2.69□□□□□ -1.98
SNORA40.16-201ENST00000517238 BTBD11A6QL63 1104 aa2.69□□□□□ -1.98
SNORA40.16-201ENST00000517238 IER5LQ5T953 404 aa2.69□□□□□ -1.98
SNORA40.16-201ENST00000517238 ANO8Q9HCE9 1232 aaPredicted RBP2.69□□□□□ -1.98
SNORA40.16-201ENST00000517238 LAPTM4AQ15012 233 aa2.68□□□□□ -1.98
SNORA40.16-201ENST00000517238 KRTAP17-1Q9BYP8 105 aa2.68□□□□□ -1.98
SNORA40.16-201ENST00000517238 PLCG2P16885 1265 aa2.67□□□□□ -1.98
SNORA40.16-201ENST00000517238 VARS2Q5ST30 1063 aaKnown RBP2.67□□□□□ -1.98
SNORA40.16-201ENST00000517238 A0A0G2JS52 829 aa2.66□□□□□ -1.98
SNORA40.16-201ENST00000517238 TIE1P35590 1138 aa2.66□□□□□ -1.98
SNORA40.16-201ENST00000517238 PABPN1Q86U42 306 aaKnown RBP eCLIP2.65□□□□□ -1.99
SNORA40.16-201ENST00000517238 TRPC6Q9Y210 931 aa2.65□□□□□ -1.99
SNORA40.16-201ENST00000517238 KRTAP9-9Q9BYP9 154 aa2.64□□□□□ -1.99
SNORA40.16-201ENST00000517238 KRTAP9-4Q9BYQ2 154 aa2.64□□□□□ -1.99
SNORA40.16-201ENST00000517238 TRIM35Q9UPQ4 493 aa2.64□□□□□ -1.99
SNORA40.16-201ENST00000517238 TTLL13PA6NNM8 815 aa2.63□□□□□ -1.99
SNORA40.16-201ENST00000517238 ZNF687Q8N1G0 1237 aa2.63□□□□□ -1.99
SNORA40.16-201ENST00000517238 KRTAP4-7Q9BYR0 210 aa2.63□□□□□ -1.99
SNORA40.16-201ENST00000517238 TREML4Q6UXN2 200 aa2.62□□□□□ -1.99
SNORA40.16-201ENST00000517238 GFRA3O60609 400 aa2.61□□□□□ -1.99
SNORA40.16-201ENST00000517238 FBLN2P98095 1184 aa2.61□□□□□ -1.99
SNORA40.16-201ENST00000517238 INSM1Q01101 510 aaPredicted RBP2.61□□□□□ -1.99
SNORA40.16-201ENST00000517238 CREBZFQ9NS37 354 aa2.61□□□□□ -1.99
SNORA40.16-201ENST00000517238 HOXB1P14653 301 aaPredicted RBP2.6□□□□□ -1.99
SNORA40.16-201ENST00000517238 ZNF710Q8N1W2 664 aa2.6□□□□□ -1.99
SNORA40.16-201ENST00000517238 KRTAP9-8Q9BYQ0 159 aa2.6□□□□□ -1.99
SNORA40.16-201ENST00000517238 MYCNP04198 464 aaPredicted RBP2.59□□□□□ -1.99
SNORA40.16-201ENST00000517238 IFFO2Q5TF58 517 aa2.59□□□□□ -1.99
SNORA40.16-201ENST00000517238 C3orf67Q6ZVT6 689 aa2.59□□□□□ -1.99
SNORA40.16-201ENST00000517238 LSM11P83369 360 aaKnown RBP eCLIP2.58□□□□□ -2
SNORA40.16-201ENST00000517238 LCE2AQ5TA79 106 aaPredicted RBP2.58□□□□□ -2
SNORA40.16-201ENST00000517238 KRTAP5-3Q6L8H2 238 aa2.58□□□□□ -2
SNORA40.16-201ENST00000517238 NPM1P06748 294 aaKnown RBP eCLIP2.57□□□□□ -2
SNORA40.16-201ENST00000517238 KIF12Q96FN5 646 aa2.54□□□□□ -2
SNORA40.16-201ENST00000517238 FAM181BA6NEQ2 426 aa2.53□□□□□ -2
SNORA40.16-201ENST00000517238 IRX5P78411 483 aaPredicted RBP2.53□□□□□ -2
SNORA40.16-201ENST00000517238 NRG2O14511 850 aaPredicted RBP2.52□□□□□ -2.01
SNORA40.16-201ENST00000517238 HOXB3P14651 431 aaPredicted RBP2.52□□□□□ -2.01
SNORA40.16-201ENST00000517238 KRTAP4-12Q9BQ66 201 aa2.52□□□□□ -2.01
SNORA40.16-201ENST00000517238 KRTAP4-2Q9BYR5 136 aa2.52□□□□□ -2.01
SNORA40.16-201ENST00000517238 OCEL1Q9H607 264 aa2.52□□□□□ -2.01
SNORA40.16-201ENST00000517238 TSPYL2Q9H2G4 693 aaPredicted RBP2.51□□□□□ -2.01
SNORA40.16-201ENST00000517238 WIPF1O43516 503 aa2.5□□□□□ -2.01
SNORA40.16-201ENST00000517238 WFS1O76024 890 aa2.5□□□□□ -2.01
SNORA40.16-201ENST00000517238 KCTD12Q96CX2 325 aaKnown RBP2.5□□□□□ -2.01
SNORA40.16-201ENST00000517238 MAP3K13O43283 966 aa2.49□□□□□ -2.01
SNORA40.16-201ENST00000517238 DOK7Q18PE1 504 aa2.49□□□□□ -2.01
SNORA40.16-201ENST00000517238 LCE1DQ5T752 114 aa2.49□□□□□ -2.01
SNORA40.16-201ENST00000517238 CCDC61Q9Y6R9 512 aa2.49□□□□□ -2.01
SNORA40.16-201ENST00000517238 RIMBP2O15034 1052 aa2.48□□□□□ -2.01
SNORA40.16-201ENST00000517238 KCTD17Q8N5Z5 321 aa2.48□□□□□ -2.01
SNORA40.16-201ENST00000517238 KRTAP4-9Q9BYQ8 210 aa2.47□□□□□ -2.01
SNORA40.16-201ENST00000517238 PTPN5P54829 565 aa2.46□□□□□ -2.02
SNORA40.16-201ENST00000517238 POTECB2RU33 542 aa2.45□□□□□ -2.02
SNORA40.16-201ENST00000517238 LORP23490 312 aaPredicted RBP2.43□□□□□ -2.02
SNORA40.16-201ENST00000517238 TMEM106CQ9BVX2 250 aa2.43□□□□□ -2.02
SNORA40.16-201ENST00000517238 ADGRD1Q6QNK2 874 aa2.42□□□□□ -2.02
SNORA40.16-201ENST00000517238 L3MBTL3Q96JM7 780 aaPredicted RBP2.42□□□□□ -2.02
SNORA40.16-201ENST00000517238 PBX2P40425 430 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms