RNA–Protein interactions for RNA: ENST00000516958.1

RNU6-250P-201, Transcript of RNA, U6 small nuclear 250, pseudogene, humanhuman

BASIC

Gene RNU6-250P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-250P-201ENST00000516958 SPDYE2BA6NHP3 402 aa3.4□□□□□ -1.87
RNU6-250P-201ENST00000516958 SPDYE6P0CI01 402 aa3.4□□□□□ -1.87
RNU6-250P-201ENST00000516958 EVX2Q03828 476 aa3.4□□□□□ -1.87
RNU6-250P-201ENST00000516958 SPDYE2Q495Y8 402 aa3.4□□□□□ -1.87
RNU6-250P-201ENST00000516958 MIER1Q8N108 512 aa3.4□□□□□ -1.87
RNU6-250P-201ENST00000516958 BAZ1BQ9UIG0 1483 aaKnown RBP3.4□□□□□ -1.87
RNU6-250P-201ENST00000516958 DNAJC5Q9H3Z4 198 aa3.39□□□□□ -1.87
RNU6-250P-201ENST00000516958 CIZ1Q9ULV3 898 aaPredicted RBP3.39□□□□□ -1.87
RNU6-250P-201ENST00000516958 SSUH2Q9Y2M2 353 aa3.39□□□□□ -1.87
RNU6-250P-201ENST00000516958 NESP48681 1621 aa3.38□□□□□ -1.87
RNU6-250P-201ENST00000516958 LAMC3Q9Y6N6 1575 aa3.38□□□□□ -1.87
RNU6-250P-201ENST00000516958 CADPSQ9ULU8 1353 aa3.38□□□□□ -1.87
RNU6-250P-201ENST00000516958 ECM2O94769 699 aaPredicted RBP3.37□□□□□ -1.87
RNU6-250P-201ENST00000516958 RSF1Q96T23 1441 aaPredicted RBP3.36□□□□□ -1.87
RNU6-250P-201ENST00000516958 ERCC6Q03468 1493 aa3.36□□□□□ -1.87
RNU6-250P-201ENST00000516958 SPOCK2Q92563 424 aa3.36□□□□□ -1.87
RNU6-250P-201ENST00000516958 PDS5BQ9NTI5 1447 aa3.36□□□□□ -1.87
RNU6-250P-201ENST00000516958 THOC2Q8NI27 1593 aaKnown RBP3.35□□□□□ -1.87
RNU6-250P-201ENST00000516958 HAP1P54257 671 aaPredicted RBP3.35□□□□□ -1.87
RNU6-250P-201ENST00000516958 PKD2Q13563 968 aa3.35□□□□□ -1.87
RNU6-250P-201ENST00000516958 WIZO95785 1651 aa3.34□□□□□ -1.87
RNU6-250P-201ENST00000516958 CFTRP13569 1480 aa3.34□□□□□ -1.88
RNU6-250P-201ENST00000516958 RGL2O15211 777 aa3.33□□□□□ -1.88
RNU6-250P-201ENST00000516958 PLEKHG5O94827 1062 aa3.33□□□□□ -1.88
RNU6-250P-201ENST00000516958 CFAP44Q96MT7 982 aa3.33□□□□□ -1.88
RNU6-250P-201ENST00000516958 TOP2AP11388 1531 aaKnown RBP3.33□□□□□ -1.88
RNU6-250P-201ENST00000516958 CHADLQ6NUI6 762 aa3.32□□□□□ -1.88
RNU6-250P-201ENST00000516958 STAG3Q9UJ98 1225 aa3.32□□□□□ -1.88
RNU6-250P-201ENST00000516958 MRC2Q9UBG0 1479 aa3.32□□□□□ -1.88
RNU6-250P-201ENST00000516958 WDR62O43379 1518 aa3.32□□□□□ -1.88
RNU6-250P-201ENST00000516958 FANCD2Q9BXW9 1451 aa3.31□□□□□ -1.88
RNU6-250P-201ENST00000516958 PITPNM1O00562 1244 aa3.31□□□□□ -1.88
RNU6-250P-201ENST00000516958 PRR29P0C7W0 189 aa3.31□□□□□ -1.88
RNU6-250P-201ENST00000516958 REM2Q8IYK8 340 aaPredicted RBP3.31□□□□□ -1.88
RNU6-250P-201ENST00000516958 RBM42Q9BTD8 480 aaKnown RBP3.31□□□□□ -1.88
RNU6-250P-201ENST00000516958 KIF21AQ7Z4S6 1674 aa3.3□□□□□ -1.88
RNU6-250P-201ENST00000516958 CEP164Q9UPV0 1460 aa3.3□□□□□ -1.88
RNU6-250P-201ENST00000516958 DCAF8Q5TAQ9 597 aa3.3□□□□□ -1.88
RNU6-250P-201ENST00000516958 SPDYE1Q8NFV5 336 aaPredicted RBP3.3□□□□□ -1.88
RNU6-250P-201ENST00000516958 CCDC88BA6NC98 1476 aa3.29□□□□□ -1.88
RNU6-250P-201ENST00000516958 NPM1P06748 294 aaKnown RBP eCLIP3.29□□□□□ -1.88
RNU6-250P-201ENST00000516958 CHGAP10645 457 aaKnown RBP3.29□□□□□ -1.88
RNU6-250P-201ENST00000516958 PAXIP1Q6ZW49 1069 aaPredicted RBP3.29□□□□□ -1.88
RNU6-250P-201ENST00000516958 AKT1S1Q96B36 256 aa3.29□□□□□ -1.88
RNU6-250P-201ENST00000516958 CREBZFQ9NS37 354 aa3.29□□□□□ -1.88
RNU6-250P-201ENST00000516958 URB2Q14146 1524 aaKnown RBP3.29□□□□□ -1.88
RNU6-250P-201ENST00000516958 PYGBP11216 843 aa3.28□□□□□ -1.88
RNU6-250P-201ENST00000516958 PLCB2Q00722 1185 aa3.28□□□□□ -1.88
RNU6-250P-201ENST00000516958 RASEFQ8IZ41 740 aa3.27□□□□□ -1.89
RNU6-250P-201ENST00000516958 PIP4P2Q8N4L2 257 aa3.27□□□□□ -1.89
RNU6-250P-201ENST00000516958 OTUD5Q96G74 571 aa3.27□□□□□ -1.89
RNU6-250P-201ENST00000516958 TSPYL2Q9H2G4 693 aaPredicted RBP3.27□□□□□ -1.89
RNU6-250P-201ENST00000516958 ABCC8Q09428 1581 aa3.26□□□□□ -1.89
RNU6-250P-201ENST00000516958 GABBR2O75899 941 aa3.26□□□□□ -1.89
RNU6-250P-201ENST00000516958 MMRN1Q13201 1228 aa3.26□□□□□ -1.89
RNU6-250P-201ENST00000516958 ZBTB47Q9UFB7 747 aaPredicted RBP3.26□□□□□ -1.89
RNU6-250P-201ENST00000516958 TOPBP1Q92547 1522 aa3.25□□□□□ -1.89
RNU6-250P-201ENST00000516958 IFT140Q96RY7 1462 aa3.25□□□□□ -1.89
RNU6-250P-201ENST00000516958 RNF25Q96BH1 459 aaPredicted RBP3.25□□□□□ -1.89
RNU6-250P-201ENST00000516958 FAM212AQ96EL1 285 aa3.25□□□□□ -1.89
RNU6-250P-201ENST00000516958 PRKAR2AP13861 404 aaKnown RBP3.24□□□□□ -1.89
RNU6-250P-201ENST00000516958 NUBP1P53384 320 aa3.24□□□□□ -1.89
RNU6-250P-201ENST00000516958 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.24□□□□□ -1.89
RNU6-250P-201ENST00000516958 PRDM2Q13029 1718 aa3.24□□□□□ -1.89
RNU6-250P-201ENST00000516958 ZNF608Q9ULD9 1512 aaPredicted RBP3.24□□□□□ -1.89
RNU6-250P-201ENST00000516958 STK25O00506 426 aa3.23□□□□□ -1.89
RNU6-250P-201ENST00000516958 DNMBPQ6XZF7 1577 aa3.23□□□□□ -1.89
RNU6-250P-201ENST00000516958 TARBP1Q13395 1621 aaKnown RBP3.22□□□□□ -1.89
RNU6-250P-201ENST00000516958 MNX1P50219 401 aaPredicted RBP3.22□□□□□ -1.89
RNU6-250P-201ENST00000516958 GSE1Q14687 1217 aa3.22□□□□□ -1.89
RNU6-250P-201ENST00000516958 TSHZ2Q9NRE2 1034 aa3.22□□□□□ -1.89
RNU6-250P-201ENST00000516958 STK24Q9Y6E0 443 aa3.22□□□□□ -1.89
RNU6-250P-201ENST00000516958 POLA1P09884 1462 aaPredicted RBP3.22□□□□□ -1.89
RNU6-250P-201ENST00000516958 RIOK3O14730 519 aaKnown RBP3.21□□□□□ -1.9
RNU6-250P-201ENST00000516958 CDAN1Q8IWY9 1227 aa3.21□□□□□ -1.9
RNU6-250P-201ENST00000516958 BBXQ8WY36 941 aaPredicted RBP3.21□□□□□ -1.9
RNU6-250P-201ENST00000516958 AQRO60306 1485 aaKnown RBP eCLIP3.21□□□□□ -1.9
RNU6-250P-201ENST00000516958 SOGA1O94964 1423 aa3.2□□□□□ -1.9
RNU6-250P-201ENST00000516958 CUX1P39880 1505 aa3.2□□□□□ -1.9
RNU6-250P-201ENST00000516958 WDR97A6NE52 1622 aa3.2□□□□□ -1.9
RNU6-250P-201ENST00000516958 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.2□□□□□ -1.9
RNU6-250P-201ENST00000516958 ZFP91Q96JP5 570 aaPredicted RBP3.2□□□□□ -1.9
RNU6-250P-201ENST00000516958 BCL11BQ9C0K0 894 aaPredicted RBP3.2□□□□□ -1.9
RNU6-250P-201ENST00000516958 PCDHB8Q9UN66 801 aa3.2□□□□□ -1.9
RNU6-250P-201ENST00000516958 FARP1Q9Y4F1 1045 aaPredicted RBP3.2□□□□□ -1.9
RNU6-250P-201ENST00000516958 PCDHB13Q9Y5F0 798 aa3.2□□□□□ -1.9
RNU6-250P-201ENST00000516958 RAD54L2Q9Y4B4 1467 aa3.2□□□□□ -1.9
RNU6-250P-201ENST00000516958 EIF4G3O43432 1585 aaKnown RBP3.2□□□□□ -1.9
RNU6-250P-201ENST00000516958 LCE2DQ5TA82 110 aaPredicted RBP3.19□□□□□ -1.9
RNU6-250P-201ENST00000516958 SPRYD3Q8NCJ5 442 aa3.19□□□□□ -1.9
RNU6-250P-201ENST00000516958 TDRD9Q8NDG6 1382 aaKnown RBP3.19□□□□□ -1.9
RNU6-250P-201ENST00000516958 FGD5Q6ZNL6 1462 aa3.19□□□□□ -1.9
RNU6-250P-201ENST00000516958 POTEIP0CG38 1075 aa3.18□□□□□ -1.9
RNU6-250P-201ENST00000516958 NKX1-1Q15270 411 aaPredicted RBP3.18□□□□□ -1.9
RNU6-250P-201ENST00000516958 TRIM41Q8WV44 630 aa3.18□□□□□ -1.9
RNU6-250P-201ENST00000516958 PHF12Q96QT6 1004 aa3.18□□□□□ -1.9
RNU6-250P-201ENST00000516958 RIMBP3CA6NJZ7 1639 aa3.18□□□□□ -1.9
RNU6-250P-201ENST00000516958 RIMBP3BA6NNM3 1639 aa3.18□□□□□ -1.9
RNU6-250P-201ENST00000516958 RIMBP3Q9UFD9 1639 aa3.18□□□□□ -1.9
RNU6-250P-201ENST00000516958 ARHGEF11O15085 1522 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms