RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 PPM1GO15355 546 aaPredicted RBP14.92□□□□□ -0.02
PRPF40A-202ENST00000410080 FKBP8Q14318 412 aa14.91□□□□□ -0.02
PRPF40A-202ENST00000410080 ZRSR1Q15695 479 aaKnown RBP14.91□□□□□ -0.02
PRPF40A-202ENST00000410080 NCLP19338 710 aaKnown RBP14.88□□□□□ -0.03
PRPF40A-202ENST00000410080 GLIPR1L2Q4G1C9 344 aa14.88□□□□□ -0.03
PRPF40A-202ENST00000410080 GOLGA2Q08379 1002 aa14.87□□□□□ -0.03
PRPF40A-202ENST00000410080 KCNH8Q96L42 1107 aa14.86□□□□□ -0.03
PRPF40A-202ENST00000410080 DDX10Q13206 875 aaKnown RBP14.85□□□□□ -0.03
PRPF40A-202ENST00000410080 CCDC136Q96JN2 1154 aa14.85□□□□□ -0.03
PRPF40A-202ENST00000410080 CHMP7Q8WUX9 453 aaPredicted RBP14.84□□□□□ -0.03
PRPF40A-202ENST00000410080 LAS1LQ9Y4W2 734 aaKnown RBP14.84□□□□□ -0.03
PRPF40A-202ENST00000410080 TRHP20396 242 aaPredicted RBP14.84□□□□□ -0.03
PRPF40A-202ENST00000410080 ISY1Q9ULR0 285 aaKnown RBP14.83□□□□□ -0.04
PRPF40A-202ENST00000410080 NAP1L2Q9ULW6 460 aaPredicted RBP14.82□□□□□ -0.04
PRPF40A-202ENST00000410080 HIRIP3Q9BW71 556 aaPredicted RBP14.8□□□□□ -0.04
PRPF40A-202ENST00000410080 PRM3Q9NNZ6 103 aa14.79□□□□□ -0.04
PRPF40A-202ENST00000410080 CASC1Q6TDU7 716 aa14.78□□□□□ -0.04
PRPF40A-202ENST00000410080 TSPY4P0CV99 314 aa14.76□□□□□ -0.05
PRPF40A-202ENST00000410080 TSPY10P0CW01 314 aa14.76□□□□□ -0.05
PRPF40A-202ENST00000410080 TRIM44Q96DX7 344 aaPredicted RBP14.76□□□□□ -0.05
PRPF40A-202ENST00000410080 IRX6P78412 446 aaPredicted RBP14.76□□□□□ -0.05
PRPF40A-202ENST00000410080 DNTTIP2Q5QJE6 756 aaKnown RBP14.75□□□□□ -0.05
PRPF40A-202ENST00000410080 PTMAP06454 111 aaKnown RBP14.74□□□□□ -0.05
PRPF40A-202ENST00000410080 SENP3-EIF4A1A0A087X0R7 540 aa14.74□□□□□ -0.05
PRPF40A-202ENST00000410080 OS9Q13438 667 aaPredicted RBP14.73□□□□□ -0.05
PRPF40A-202ENST00000410080 RRP7BPQ9NSQ0 103 aa14.72□□□□□ -0.05
PRPF40A-202ENST00000410080 FGD1P98174 961 aa14.72□□□□□ -0.05
PRPF40A-202ENST00000410080 FTSJ3Q8IY81 847 aaKnown RBP14.72□□□□□ -0.05
PRPF40A-202ENST00000410080 ACIN1Q9UKV3 1341 aaKnown RBP14.71□□□□□ -0.05
PRPF40A-202ENST00000410080 MTUS2Q5JR59 1369 aa14.71□□□□□ -0.05
PRPF40A-202ENST00000410080 PLCB2Q00722 1185 aa14.69□□□□□ -0.06
PRPF40A-202ENST00000410080 RGL3Q3MIN7 710 aa14.69□□□□□ -0.06
PRPF40A-202ENST00000410080 AMER1Q5JTC6 1135 aaPredicted RBP14.69□□□□□ -0.06
PRPF40A-202ENST00000410080 BECN1Q14457 450 aa14.68□□□□□ -0.06
PRPF40A-202ENST00000410080 SOX12O15370 315 aa14.68□□□□□ -0.06
PRPF40A-202ENST00000410080 GOLGA6L22H0YM25 854 aa14.67□□□□□ -0.06
PRPF40A-202ENST00000410080 MRS2Q9HD23 443 aa14.67□□□□□ -0.06
PRPF40A-202ENST00000410080 KCNJ4P48050 445 aa14.66□□□□□ -0.06
PRPF40A-202ENST00000410080 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.65□□□□□ -0.06
PRPF40A-202ENST00000410080 TNNT2P45379 298 aaPredicted RBP14.65□□□□□ -0.06
PRPF40A-202ENST00000410080 NEUROD2Q15784 382 aa14.63□□□□□ -0.07
PRPF40A-202ENST00000410080 POGKQ9P215 609 aa14.62□□□□□ -0.07
PRPF40A-202ENST00000410080 CFAP53Q96M91 514 aa14.61□□□□□ -0.07
PRPF40A-202ENST00000410080 MLECQ14165 292 aa14.61□□□□□ -0.07
PRPF40A-202ENST00000410080 KAT6BQ8WYB5 2073 aa14.59□□□□□ -0.07
PRPF40A-202ENST00000410080 TMX4Q9H1E5 349 aaPredicted RBP14.59□□□□□ -0.07
PRPF40A-202ENST00000410080 GOLGA6L6A8MZA4 724 aa14.58□□□□□ -0.08
PRPF40A-202ENST00000410080 CCDC9Q9Y3X0 531 aaKnown RBP14.58□□□□□ -0.08
PRPF40A-202ENST00000410080 ANO8Q9HCE9 1232 aaPredicted RBP14.58□□□□□ -0.08
PRPF40A-202ENST00000410080 KRI1Q8N9T8 703 aaKnown RBP14.57□□□□□ -0.08
PRPF40A-202ENST00000410080 ERCC6Q03468 1493 aa14.57□□□□□ -0.08
PRPF40A-202ENST00000410080 MAPK8IP3Q9UPT6 1336 aa14.57□□□□□ -0.08
PRPF40A-202ENST00000410080 ZNF330Q9Y3S2 320 aaPredicted RBP14.57□□□□□ -0.08
PRPF40A-202ENST00000410080 PDE4CQ08493 712 aa14.55□□□□□ -0.08
PRPF40A-202ENST00000410080 KNSTRNQ9Y448 316 aa14.55□□□□□ -0.08
PRPF40A-202ENST00000410080 ZCCHC6Q5VYS8 1495 aaKnown RBP14.54□□□□□ -0.08
PRPF40A-202ENST00000410080 RB1CC1Q8TDY2 1594 aa14.54□□□□□ -0.08
PRPF40A-202ENST00000410080 GNL2Q13823 731 aaKnown RBP14.54□□□□□ -0.08
PRPF40A-202ENST00000410080 DDRGK1Q96HY6 314 aa14.53□□□□□ -0.08
PRPF40A-202ENST00000410080 PLEKHD1A6NEE1 506 aa14.53□□□□□ -0.08
PRPF40A-202ENST00000410080 G3V3G9 751 aa14.52□□□□□ -0.08
PRPF40A-202ENST00000410080 DCAF8Q5TAQ9 597 aa14.52□□□□□ -0.08
PRPF40A-202ENST00000410080 U2SURPO15042 1029 aaKnown RBP14.52□□□□□ -0.09
PRPF40A-202ENST00000410080 PAK3O75914 559 aaPredicted RBP14.51□□□□□ -0.09
PRPF40A-202ENST00000410080 CCDC180Q9P1Z9 1646 aa14.51□□□□□ -0.09
PRPF40A-202ENST00000410080 HSP90AB1P08238 724 aaKnown RBP14.51□□□□□ -0.09
PRPF40A-202ENST00000410080 CLIP1P30622 1438 aa14.51□□□□□ -0.09
PRPF40A-202ENST00000410080 EIF4G2P78344 907 aaKnown RBP eCLIP14.5□□□□□ -0.09
PRPF40A-202ENST00000410080 NOC3LQ8WTT2 800 aaKnown RBP14.5□□□□□ -0.09
PRPF40A-202ENST00000410080 FRAT1Q92837 279 aaPredicted RBP14.5□□□□□ -0.09
PRPF40A-202ENST00000410080 KIAA2012Q0VF49 1180 aa14.48□□□□□ -0.09
PRPF40A-202ENST00000410080 DRC7Q8IY82 874 aa14.48□□□□□ -0.09
PRPF40A-202ENST00000410080 ERICH6BQ5W0A0 696 aa14.47□□□□□ -0.09
PRPF40A-202ENST00000410080 EIF4G1Q04637 1599 aaKnown RBP14.47□□□□□ -0.09
PRPF40A-202ENST00000410080 GOLGA6L4A6NEF3 574 aa14.46□□□□□ -0.09
PRPF40A-202ENST00000410080 MIER1Q8N108 512 aa14.45□□□□□ -0.1
PRPF40A-202ENST00000410080 SAFB2Q14151 953 aaKnown RBP eCLIP14.45□□□□□ -0.1
PRPF40A-202ENST00000410080 CFDP1Q9UEE9 299 aaPredicted RBP14.44□□□□□ -0.1
PRPF40A-202ENST00000410080 CC2D1BQ5T0F9 858 aaKnown RBP14.44□□□□□ -0.1
PRPF40A-202ENST00000410080 NUDCQ9Y266 331 aa14.44□□□□□ -0.1
PRPF40A-202ENST00000410080 FBXO3Q9UK99 471 aa14.43□□□□□ -0.1
PRPF40A-202ENST00000410080 ANP32EQ9BTT0 268 aa14.43□□□□□ -0.1
PRPF40A-202ENST00000410080 RSF1Q96T23 1441 aaPredicted RBP14.43□□□□□ -0.1
PRPF40A-202ENST00000410080 CSB-PGBD3P0DP91 1061 aa14.42□□□□□ -0.1
PRPF40A-202ENST00000410080 BAZ1BQ9UIG0 1483 aaKnown RBP14.42□□□□□ -0.1
PRPF40A-202ENST00000410080 NRDCO43847 1150 aa14.42□□□□□ -0.1
PRPF40A-202ENST00000410080 NAP1L5Q96NT1 182 aaPredicted RBP14.42□□□□□ -0.1
PRPF40A-202ENST00000410080 DCAF1Q9Y4B6 1507 aa14.42□□□□□ -0.1
PRPF40A-202ENST00000410080 CDCA8Q53HL2 280 aa14.41□□□□□ -0.1
PRPF40A-202ENST00000410080 CHMP3Q9Y3E7 222 aa14.41□□□□□ -0.1
PRPF40A-202ENST00000410080 PNNQ9H307 717 aaKnown RBP14.4□□□□□ -0.1
PRPF40A-202ENST00000410080 RGS3P49796 1198 aa14.4□□□□□ -0.1
PRPF40A-202ENST00000410080 SRPK2P78362 688 aaKnown RBP14.4□□□□□ -0.1
PRPF40A-202ENST00000410080 CARD11Q9BXL7 1154 aa14.4□□□□□ -0.1
PRPF40A-202ENST00000410080 VPS53Q5VIR6 699 aa14.4□□□□□ -0.1
PRPF40A-202ENST00000410080 RTF1Q92541 710 aaKnown RBP14.39□□□□□ -0.11
PRPF40A-202ENST00000410080 SPRYD3Q8NCJ5 442 aa14.39□□□□□ -0.11
PRPF40A-202ENST00000410080 APBB1O00213 710 aa14.38□□□□□ -0.11
PRPF40A-202ENST00000410080 GOLGA3Q08378 1498 aa14.38□□□□□ -0.11
PRPF40A-202ENST00000410080 AEBP2Q6ZN18 517 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms