RNA–Protein interactions for RNA: ENST00000404898.5

CACNA1I-203, Transcript of calcium voltage-gated channel subunit alpha1 I, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1I, Length 9,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1I-203ENST00000404898 MRS2Q9HD23 443 aa19.2■□□□□ 0.66
CACNA1I-203ENST00000404898 SCAF1Q9H7N4 1312 aaKnown RBP19.15■□□□□ 0.66
CACNA1I-203ENST00000404898 KIAA2012Q0VF49 1180 aa19.15■□□□□ 0.66
CACNA1I-203ENST00000404898 GOLGA6L1Q8N7Z2 621 aa19.13■□□□□ 0.65
CACNA1I-203ENST00000404898 SETQ01105 290 aaPredicted RBP19.12■□□□□ 0.65
CACNA1I-203ENST00000404898 CALRP27797 417 aaKnown RBP19.11■□□□□ 0.65
CACNA1I-203ENST00000404898 SYAP1Q96A49 352 aaPredicted RBP19.1■□□□□ 0.65
CACNA1I-203ENST00000404898 CDCA8Q53HL2 280 aa19.1■□□□□ 0.65
CACNA1I-203ENST00000404898 FTSJ3Q8IY81 847 aaKnown RBP19.09■□□□□ 0.65
CACNA1I-203ENST00000404898 ESF1Q9H501 851 aaKnown RBP19.08■□□□□ 0.65
CACNA1I-203ENST00000404898 HSCBQ8IWL3 235 aa19.06■□□□□ 0.64
CACNA1I-203ENST00000404898 RSPH6AQ9H0K4 717 aa19.06■□□□□ 0.64
CACNA1I-203ENST00000404898 PPP4R2Q9NY27 417 aa19.06■□□□□ 0.64
CACNA1I-203ENST00000404898 DDX10Q13206 875 aaKnown RBP19.05■□□□□ 0.64
CACNA1I-203ENST00000404898 GOLGA6L4A6NEF3 574 aa19.05■□□□□ 0.64
CACNA1I-203ENST00000404898 PNNQ9H307 717 aaKnown RBP19.04■□□□□ 0.64
CACNA1I-203ENST00000404898 HSP90AB1P08238 724 aaKnown RBP19.03■□□□□ 0.64
CACNA1I-203ENST00000404898 GBP4Q96PP9 640 aa19.02■□□□□ 0.64
CACNA1I-203ENST00000404898 MCCP23508 829 aa19.02■□□□□ 0.64
CACNA1I-203ENST00000404898 CFAP53Q96M91 514 aa19.01■□□□□ 0.63
CACNA1I-203ENST00000404898 A0A0U1RQG5 324 aaPredicted RBP19■□□□□ 0.63
CACNA1I-203ENST00000404898 HTATSF1O43719 755 aaKnown RBP18.99■□□□□ 0.63
CACNA1I-203ENST00000404898 CCDC34Q96HJ3 373 aa18.99■□□□□ 0.63
CACNA1I-203ENST00000404898 EIF4G2P78344 907 aaKnown RBP eCLIP18.99■□□□□ 0.63
CACNA1I-203ENST00000404898 PHF14O94880 888 aa18.98■□□□□ 0.63
CACNA1I-203ENST00000404898 NOC3LQ8WTT2 800 aaKnown RBP18.97■□□□□ 0.63
CACNA1I-203ENST00000404898 DRC7Q8IY82 874 aa18.96■□□□□ 0.63
CACNA1I-203ENST00000404898 DEKP35659 375 aaKnown RBP18.94■□□□□ 0.62
CACNA1I-203ENST00000404898 STAG3Q9UJ98 1225 aa18.94■□□□□ 0.62
CACNA1I-203ENST00000404898 HAP1P54257 671 aaPredicted RBP18.92■□□□□ 0.62
CACNA1I-203ENST00000404898 GOLGA6L3A6NEY3 463 aa18.92■□□□□ 0.62
CACNA1I-203ENST00000404898 TPM4P67936 248 aa18.91■□□□□ 0.62
CACNA1I-203ENST00000404898 LAS1LQ9Y4W2 734 aaKnown RBP18.89■□□□□ 0.62
CACNA1I-203ENST00000404898 FGD1P98174 961 aa18.89■□□□□ 0.61
CACNA1I-203ENST00000404898 HSP90AA2PQ14568 343 aaPredicted RBP18.89■□□□□ 0.61
CACNA1I-203ENST00000404898 CSRNP3Q8WYN3 585 aa18.89■□□□□ 0.61
CACNA1I-203ENST00000404898 CSPP1Q1MSJ5 1256 aa18.89■□□□□ 0.61
CACNA1I-203ENST00000404898 EEA1Q15075 1411 aa18.88■□□□□ 0.61
CACNA1I-203ENST00000404898 PLCB2Q00722 1185 aa18.87■□□□□ 0.61
CACNA1I-203ENST00000404898 RSF1Q96T23 1441 aaPredicted RBP18.86■□□□□ 0.61
CACNA1I-203ENST00000404898 GPS2Q13227 327 aa18.84■□□□□ 0.61
CACNA1I-203ENST00000404898 RTN4Q9NQC3 1192 aaKnown RBP18.84■□□□□ 0.61
CACNA1I-203ENST00000404898 KNSTRNQ9Y448 316 aa18.83■□□□□ 0.61
CACNA1I-203ENST00000404898 MIER1Q8N108 512 aa18.8■□□□□ 0.6
CACNA1I-203ENST00000404898 KCNJ4P48050 445 aa18.79■□□□□ 0.6
CACNA1I-203ENST00000404898 MTERF4Q7Z6M4 381 aaKnown RBP18.79■□□□□ 0.6
CACNA1I-203ENST00000404898 NOM1Q5C9Z4 860 aaKnown RBP18.78■□□□□ 0.6
CACNA1I-203ENST00000404898 SALL2Q9Y467 1007 aaPredicted RBP18.77■□□□□ 0.59
CACNA1I-203ENST00000404898 MTUS2Q5JR59 1369 aa18.76■□□□□ 0.59
CACNA1I-203ENST00000404898 ZNF777Q9ULD5 760 aaPredicted RBP18.75■□□□□ 0.59
CACNA1I-203ENST00000404898 CCDC70Q6NSX1 233 aa18.74■□□□□ 0.59
CACNA1I-203ENST00000404898 MAPK8IP3Q9UPT6 1336 aa18.74■□□□□ 0.59
CACNA1I-203ENST00000404898 NUDCQ9Y266 331 aa18.73■□□□□ 0.59
CACNA1I-203ENST00000404898 TEX35Q5T0J7 233 aa18.73■□□□□ 0.59
CACNA1I-203ENST00000404898 GNL2Q13823 731 aaKnown RBP18.72■□□□□ 0.59
CACNA1I-203ENST00000404898 CHMP4AQ9BY43 222 aa18.72■□□□□ 0.59
CACNA1I-203ENST00000404898 DDX11L8A8MPP1 907 aa18.71■□□□□ 0.59
CACNA1I-203ENST00000404898 CLIP1P30622 1438 aa18.7■□□□□ 0.58
CACNA1I-203ENST00000404898 TSPY4P0CV99 314 aa18.69■□□□□ 0.58
CACNA1I-203ENST00000404898 TSPY10P0CW01 314 aa18.69■□□□□ 0.58
CACNA1I-203ENST00000404898 IRX6P78412 446 aaPredicted RBP18.69■□□□□ 0.58
CACNA1I-203ENST00000404898 SUPT16HQ9Y5B9 1047 aaKnown RBP18.69■□□□□ 0.58
CACNA1I-203ENST00000404898 CHMP4CQ96CF2 233 aa18.68■□□□□ 0.58
CACNA1I-203ENST00000404898 KIAA1211Q6ZU35 1233 aa18.68■□□□□ 0.58
CACNA1I-203ENST00000404898 TCERG1O14776 1098 aaKnown RBP18.67■□□□□ 0.58
CACNA1I-203ENST00000404898 AMER1Q5JTC6 1135 aaPredicted RBP18.67■□□□□ 0.58
CACNA1I-203ENST00000404898 MAP7D2Q96T17 732 aa18.66■□□□□ 0.58
CACNA1I-203ENST00000404898 TPM3P06753 285 aa18.66■□□□□ 0.58
CACNA1I-203ENST00000404898 CALD1Q05682 793 aaKnown RBP18.65■□□□□ 0.58
CACNA1I-203ENST00000404898 KIF3AQ9Y496 699 aa18.65■□□□□ 0.58
CACNA1I-203ENST00000404898 GOLGA3Q08378 1498 aa18.65■□□□□ 0.58
CACNA1I-203ENST00000404898 CCER2I3L3R5 266 aa18.65■□□□□ 0.58
CACNA1I-203ENST00000404898 OS9Q13438 667 aaPredicted RBP18.64■□□□□ 0.57
CACNA1I-203ENST00000404898 RGS3P49796 1198 aa18.64■□□□□ 0.57
CACNA1I-203ENST00000404898 SKOR2Q2VWA4 1001 aaPredicted RBP18.64■□□□□ 0.57
CACNA1I-203ENST00000404898 GOLGA2Q08379 1002 aa18.63■□□□□ 0.57
CACNA1I-203ENST00000404898 IPO8O15397 1037 aaKnown RBP18.62■□□□□ 0.57
CACNA1I-203ENST00000404898 TIMELESSQ9UNS1 1208 aa18.62■□□□□ 0.57
CACNA1I-203ENST00000404898 CHGAP10645 457 aaKnown RBP18.61■□□□□ 0.57
CACNA1I-203ENST00000404898 HMMRO75330 724 aa18.6■□□□□ 0.57
CACNA1I-203ENST00000404898 ATP6V1DQ9Y5K8 247 aa18.6■□□□□ 0.57
CACNA1I-203ENST00000404898 CWC15Q9P013 229 aaKnown RBP18.59■□□□□ 0.57
CACNA1I-203ENST00000404898 HDAC5Q9UQL6 1122 aa18.59■□□□□ 0.57
CACNA1I-203ENST00000404898 FBLN2P98095 1184 aa18.59■□□□□ 0.57
CACNA1I-203ENST00000404898 PHLDB1Q86UU1 1377 aa18.59■□□□□ 0.57
CACNA1I-203ENST00000404898 KIF16BQ96L93 1317 aa18.58■□□□□ 0.56
CACNA1I-203ENST00000404898 RBM19Q9Y4C8 960 aaKnown RBP18.57■□□□□ 0.56
CACNA1I-203ENST00000404898 GPATCH3Q96I76 525 aa18.57■□□□□ 0.56
CACNA1I-203ENST00000404898 RRP12Q5JTH9 1297 aaKnown RBP18.56■□□□□ 0.56
CACNA1I-203ENST00000404898 IPO9Q96P70 1041 aaKnown RBP18.56■□□□□ 0.56
CACNA1I-203ENST00000404898 ABCC9O60706 1549 aa18.56■□□□□ 0.56
CACNA1I-203ENST00000404898 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.55■□□□□ 0.56
CACNA1I-203ENST00000404898 CDR1P51861 262 aa18.55■□□□□ 0.56
CACNA1I-203ENST00000404898 SCRIBQ14160 1630 aa18.55■□□□□ 0.56
CACNA1I-203ENST00000404898 TPM1P09493 284 aa18.54■□□□□ 0.56
CACNA1I-203ENST00000404898 TSR1Q2NL82 804 aaKnown RBP18.54■□□□□ 0.56
CACNA1I-203ENST00000404898 ACBD3Q9H3P7 528 aa18.54■□□□□ 0.56
CACNA1I-203ENST00000404898 CEP89Q96ST8 783 aa18.54■□□□□ 0.56
CACNA1I-203ENST00000404898 CLSTN1O94985 981 aa18.52■□□□□ 0.55
CACNA1I-203ENST00000404898 CCDC66A2RUB6 948 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms