RNA–Protein interactions for RNA: ENST00000343738.10

PKD1P6-201, Transcript of polycystin 1, transient receptor potential channel interacting pseudogene 6, humanhuman

BASIC

Gene PKD1P6, Length 4,769 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1P6-201ENST00000343738 SUPT16HQ9Y5B9 1047 aaKnown RBP28.46■■■□□ 2.15
PKD1P6-201ENST00000343738 TSPY4P0CV99 314 aa28.43■■■□□ 2.14
PKD1P6-201ENST00000343738 TSPY10P0CW01 314 aa28.43■■■□□ 2.14
PKD1P6-201ENST00000343738 KDM2AQ9Y2K7 1162 aa28.42■■■□□ 2.14
PKD1P6-201ENST00000343738 ZBTB47Q9UFB7 747 aaPredicted RBP28.4■■■□□ 2.14
PKD1P6-201ENST00000343738 ANP32EQ9BTT0 268 aa28.33■■■□□ 2.13
PKD1P6-201ENST00000343738 NBR1Q14596 966 aa28.33■■■□□ 2.13
PKD1P6-201ENST00000343738 NEFMP07197 916 aa28.32■■■□□ 2.12
PKD1P6-201ENST00000343738 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.32■■■□□ 2.121e-7■□□□□ 11
PKD1P6-201ENST00000343738 KANK4Q5T7N3 995 aaPredicted RBP28.32■■■□□ 2.12
PKD1P6-201ENST00000343738 TIMELESSQ9UNS1 1208 aa28.32■■■□□ 2.12
PKD1P6-201ENST00000343738 WIZO95785 1651 aa28.28■■■□□ 2.12
PKD1P6-201ENST00000343738 FHAD1B1AJZ9 1412 aa28.26■■■□□ 2.11
PKD1P6-201ENST00000343738 CARMIL1Q5VZK9 1371 aa28.23■■■□□ 2.11
PKD1P6-201ENST00000343738 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.22■■■□□ 2.11
PKD1P6-201ENST00000343738 BCL11AQ9H165 835 aa28.22■■■□□ 2.11
PKD1P6-201ENST00000343738 WDR43Q15061 677 aaKnown RBP eCLIP28.2■■■□□ 2.11
PKD1P6-201ENST00000343738 CHMP7Q8WUX9 453 aaPredicted RBP28.2■■■□□ 2.11
PKD1P6-201ENST00000343738 SETD5Q9C0A6 1442 aa28.19■■■□□ 2.1
PKD1P6-201ENST00000343738 CHGAP10645 457 aaKnown RBP28.19■■■□□ 2.1
PKD1P6-201ENST00000343738 TOP2AP11388 1531 aaKnown RBP28.18■■■□□ 2.1
PKD1P6-201ENST00000343738 CUX2O14529 1486 aa28.17■■■□□ 2.1
PKD1P6-201ENST00000343738 CCER2I3L3R5 266 aa28.16■■■□□ 2.1
PKD1P6-201ENST00000343738 UPF2Q9HAU5 1272 aaKnown RBP28.14■■■□□ 2.1
PKD1P6-201ENST00000343738 PPP4R2Q9NY27 417 aa28.13■■■□□ 2.09
PKD1P6-201ENST00000343738 CFDP1Q9UEE9 299 aaPredicted RBP28.11■■■□□ 2.09
PKD1P6-201ENST00000343738 PLEKHD1A6NEE1 506 aa28.1■■■□□ 2.09
PKD1P6-201ENST00000343738 SENP3-EIF4A1A0A087X0R7 540 aa28.07■■■□□ 2.08
PKD1P6-201ENST00000343738 RAB3GAP2Q9H2M9 1393 aa28.07■■■□□ 2.08
PKD1P6-201ENST00000343738 CARD11Q9BXL7 1154 aa28.03■■■□□ 2.08
PKD1P6-201ENST00000343738 RGL3Q3MIN7 710 aa28.02■■■□□ 2.08
PKD1P6-201ENST00000343738 RUSC2Q8N2Y8 1516 aa27.98■■■□□ 2.07
PKD1P6-201ENST00000343738 ARHGAP35Q9NRY4 1499 aa27.95■■■□□ 2.07
PKD1P6-201ENST00000343738 RAPGEF2Q9Y4G8 1499 aa27.95■■■□□ 2.06
PKD1P6-201ENST00000343738 SMARCA2P51531 1590 aa27.95■■■□□ 2.06
PKD1P6-201ENST00000343738 HSP90AA1P07900 732 aaKnown RBP27.94■■■□□ 2.06
PKD1P6-201ENST00000343738 EIF5BO60841 1220 aaKnown RBP27.94■■■□□ 2.06
PKD1P6-201ENST00000343738 SLC24A1O60721 1099 aa27.94■■■□□ 2.06
PKD1P6-201ENST00000343738 B4GALNT3Q6L9W6 998 aa27.93■■■□□ 2.06
PKD1P6-201ENST00000343738 PPP1R15AO75807 674 aaPredicted RBP27.92■■■□□ 2.06
PKD1P6-201ENST00000343738 HSPA5P11021 654 aaKnown RBP27.91■■■□□ 2.06
PKD1P6-201ENST00000343738 RBM19Q9Y4C8 960 aaKnown RBP27.91■■■□□ 2.06
PKD1P6-201ENST00000343738 DHX57Q6P158 1386 aaKnown RBP27.89■■■□□ 2.05
PKD1P6-201ENST00000343738 DDRGK1Q96HY6 314 aa27.87■■■□□ 2.05
PKD1P6-201ENST00000343738 NPM1P06748 294 aaKnown RBP eCLIP27.84■■■□□ 2.05
PKD1P6-201ENST00000343738 STAG3Q9UJ98 1225 aa27.84■■■□□ 2.05
PKD1P6-201ENST00000343738 KCNH8Q96L42 1107 aa27.82■■■□□ 2.04
PKD1P6-201ENST00000343738 TSHZ2Q9NRE2 1034 aa27.82■■■□□ 2.04
PKD1P6-201ENST00000343738 KNSTRNQ9Y448 316 aa27.82■■■□□ 2.04
PKD1P6-201ENST00000343738 ANP32BQ92688 251 aaKnown RBP27.8■■■□□ 2.04
PKD1P6-201ENST00000343738 CDCA8Q53HL2 280 aa27.79■■■□□ 2.04
PKD1P6-201ENST00000343738 SMARCA4P51532 1647 aa27.78■■■□□ 2.04
PKD1P6-201ENST00000343738 NOP58Q9Y2X3 529 aaKnown RBP27.77■■■□□ 2.04
PKD1P6-201ENST00000343738 ERICH6BQ5W0A0 696 aa27.74■■■□□ 2.03
PKD1P6-201ENST00000343738 FMN1Q68DA7 1419 aa27.73■■■□□ 2.03
PKD1P6-201ENST00000343738 FOXD1Q16676 465 aa27.72■■■□□ 2.03
PKD1P6-201ENST00000343738 EIF4G1Q04637 1599 aaKnown RBP27.7■■■□□ 2.03
PKD1P6-201ENST00000343738 PPM1GO15355 546 aaPredicted RBP27.7■■■□□ 2.02
PKD1P6-201ENST00000343738 DCAF11Q8TEB1 546 aa27.7■■■□□ 2.02
PKD1P6-201ENST00000343738 MPHOSPH9Q99550 1183 aa27.7■■■□□ 2.02
PKD1P6-201ENST00000343738 ATAD2BQ9ULI0 1458 aa27.69■■■□□ 2.02
PKD1P6-201ENST00000343738 ESF1Q9H501 851 aaKnown RBP27.69■■■□□ 2.02
PKD1P6-201ENST00000343738 BECN1Q14457 450 aa27.68■■■□□ 2.02
PKD1P6-201ENST00000343738 ARXQ96QS3 562 aa27.67■■■□□ 2.02
PKD1P6-201ENST00000343738 CC2D1BQ5T0F9 858 aaKnown RBP27.64■■■□□ 2.02
PKD1P6-201ENST00000343738 PKD2Q13563 968 aa27.61■■■□□ 2.01
PKD1P6-201ENST00000343738 FHOD3Q2V2M9 1422 aa27.6■■■□□ 2.01
PKD1P6-201ENST00000343738 LAS1LQ9Y4W2 734 aaKnown RBP27.6■■■□□ 2.01
PKD1P6-201ENST00000343738 TDRD9Q8NDG6 1382 aaKnown RBP27.59■■■□□ 2.01
PKD1P6-201ENST00000343738 L3MBTL2Q969R5 705 aa27.58■■■□□ 2.01
PKD1P6-201ENST00000343738 CFAP53Q96M91 514 aa27.58■■■□□ 2.01
PKD1P6-201ENST00000343738 TMF1P82094 1093 aa27.56■■■□□ 2
PKD1P6-201ENST00000343738 RGS3P49796 1198 aa27.55■■■□□ 2
PKD1P6-201ENST00000343738 CADPSQ9ULU8 1353 aa27.53■■■□□ 2
PKD1P6-201ENST00000343738 NEUROD2Q15784 382 aa27.52■■■□□ 2
PKD1P6-201ENST00000343738 MYH16Q9H6N6 1097 aa27.5■■□□□ 1.99
PKD1P6-201ENST00000343738 SENP3Q9H4L4 574 aaPredicted RBP27.44■■□□□ 1.98
PKD1P6-201ENST00000343738 DEKP35659 375 aaKnown RBP27.43■■□□□ 1.98
PKD1P6-201ENST00000343738 FRAT1Q92837 279 aaPredicted RBP27.42■■□□□ 1.98
PKD1P6-201ENST00000343738 FTSJ3Q8IY81 847 aaKnown RBP27.42■■□□□ 1.98
PKD1P6-201ENST00000343738 RALBP1Q15311 655 aa27.41■■□□□ 1.98
PKD1P6-201ENST00000343738 KTN1Q86UP2 1357 aaKnown RBP27.41■■□□□ 1.98
PKD1P6-201ENST00000343738 NUDCQ9Y266 331 aa27.41■■□□□ 1.98
PKD1P6-201ENST00000343738 RCAN3Q9UKA8 241 aa27.4■■□□□ 1.98
PKD1P6-201ENST00000343738 NUP155O75694 1391 aa27.39■■□□□ 1.98
PKD1P6-201ENST00000343738 KIF21BO75037 1637 aa27.38■■□□□ 1.97
PKD1P6-201ENST00000343738 GLIPR1L2Q4G1C9 344 aa27.37■■□□□ 1.97
PKD1P6-201ENST00000343738 PDS5BQ9NTI5 1447 aa27.36■■□□□ 1.97
PKD1P6-201ENST00000343738 TNNT2P45379 298 aaPredicted RBP27.35■■□□□ 1.97
PKD1P6-201ENST00000343738 ANKRD30AQ9BXX3 1397 aa27.35■■□□□ 1.97
PKD1P6-201ENST00000343738 TCERG1O14776 1098 aaKnown RBP27.31■■□□□ 1.96
PKD1P6-201ENST00000343738 IGF1RP08069 1367 aa27.31■■□□□ 1.96
PKD1P6-201ENST00000343738 PRKRIP1Q9H875 184 aaPredicted RBP27.31■■□□□ 1.96
PKD1P6-201ENST00000343738 ROCK2O75116 1388 aaKnown RBP27.31■■□□□ 1.96
PKD1P6-201ENST00000343738 MAPK8IP3Q9UPT6 1336 aa27.31■■□□□ 1.96
PKD1P6-201ENST00000343738 ERCC6Q03468 1493 aa27.3■■□□□ 1.96
PKD1P6-201ENST00000343738 GOLGA6L22H0YM25 854 aa27.28■■□□□ 1.96
PKD1P6-201ENST00000343738 RTN4Q9NQC3 1192 aaKnown RBP27.28■■□□□ 1.96
PKD1P6-201ENST00000343738 CCDC18Q5T9S5 1454 aa27.27■■□□□ 1.96
PKD1P6-201ENST00000343738 TRIM44Q96DX7 344 aaPredicted RBP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms