RNA–Protein interactions for RNA: ENST00000340001.8

ABCA9-201, Transcript of ATP binding cassette subfamily A member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA9, Length 6,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-201ENST00000340001 PPM1GO15355 546 aaPredicted RBP9.89□□□□□ -0.83
ABCA9-201ENST00000340001 EIF5BO60841 1220 aaKnown RBP9.89□□□□□ -0.83
ABCA9-201ENST00000340001 ANO8Q9HCE9 1232 aaPredicted RBP9.89□□□□□ -0.83
ABCA9-201ENST00000340001 ISY1Q9ULR0 285 aaKnown RBP9.88□□□□□ -0.83
ABCA9-201ENST00000340001 SOX12O15370 315 aa9.87□□□□□ -0.83
ABCA9-201ENST00000340001 MLECQ14165 292 aa9.87□□□□□ -0.83
ABCA9-201ENST00000340001 HNRNPUQ00839 825 aaKnown RBP eCLIP9.87□□□□□ -0.83
ABCA9-201ENST00000340001 NBR1Q14596 966 aa9.85□□□□□ -0.83
ABCA9-201ENST00000340001 AEBP2Q6ZN18 517 aaPredicted RBP9.85□□□□□ -0.83
ABCA9-201ENST00000340001 MIER1Q8N108 512 aa9.83□□□□□ -0.84
ABCA9-201ENST00000340001 CCDC9Q9Y3X0 531 aaKnown RBP9.82□□□□□ -0.84
ABCA9-201ENST00000340001 TONSLQ96HA7 1378 aa9.81□□□□□ -0.84
ABCA9-201ENST00000340001 PHF23Q9BUL5 403 aaPredicted RBP9.81□□□□□ -0.84
ABCA9-201ENST00000340001 PRM3Q9NNZ6 103 aa9.81□□□□□ -0.84
ABCA9-201ENST00000340001 ANP32AP39687 249 aaKnown RBP9.81□□□□□ -0.84
ABCA9-201ENST00000340001 TMC1Q8TDI8 760 aa9.79□□□□□ -0.84
ABCA9-201ENST00000340001 KLHL34Q8N239 644 aa9.77□□□□□ -0.84
ABCA9-201ENST00000340001 LAS1LQ9Y4W2 734 aaKnown RBP9.77□□□□□ -0.85
ABCA9-201ENST00000340001 ZNF330Q9Y3S2 320 aaPredicted RBP9.77□□□□□ -0.85
ABCA9-201ENST00000340001 DCAF1Q9Y4B6 1507 aa9.75□□□□□ -0.85
ABCA9-201ENST00000340001 PDE4CQ08493 712 aa9.75□□□□□ -0.85
ABCA9-201ENST00000340001 RRP7BPQ9NSQ0 103 aa9.74□□□□□ -0.85
ABCA9-201ENST00000340001 ZCCHC6Q5VYS8 1495 aaKnown RBP9.74□□□□□ -0.85
ABCA9-201ENST00000340001 NAP1L2Q9ULW6 460 aaPredicted RBP9.74□□□□□ -0.85
ABCA9-201ENST00000340001 FBXO3Q9UK99 471 aa9.73□□□□□ -0.85
ABCA9-201ENST00000340001 RGL3Q3MIN7 710 aa9.71□□□□□ -0.85
ABCA9-201ENST00000340001 ANP32BQ92688 251 aaKnown RBP9.71□□□□□ -0.85
ABCA9-201ENST00000340001 TNNT2P45379 298 aaPredicted RBP9.71□□□□□ -0.86
ABCA9-201ENST00000340001 GOLGA2Q08379 1002 aa9.7□□□□□ -0.86
ABCA9-201ENST00000340001 MRS2Q9HD23 443 aa9.69□□□□□ -0.86
ABCA9-201ENST00000340001 KRI1Q8N9T8 703 aaKnown RBP9.69□□□□□ -0.86
ABCA9-201ENST00000340001 CCDC136Q96JN2 1154 aa9.69□□□□□ -0.86
ABCA9-201ENST00000340001 NEUROD2Q15784 382 aa9.68□□□□□ -0.86
ABCA9-201ENST00000340001 CHMP7Q8WUX9 453 aaPredicted RBP9.68□□□□□ -0.86
ABCA9-201ENST00000340001 MSH5O43196 834 aa9.66□□□□□ -0.86
ABCA9-201ENST00000340001 WDR43Q15061 677 aaKnown RBP eCLIP9.65□□□□□ -0.86
ABCA9-201ENST00000340001 SAFB2Q14151 953 aaKnown RBP eCLIP9.65□□□□□ -0.86
ABCA9-201ENST00000340001 WWC1Q8IX03 1113 aa9.64□□□□□ -0.87
ABCA9-201ENST00000340001 MTUS2Q5JR59 1369 aa9.63□□□□□ -0.87
ABCA9-201ENST00000340001 CLIP1P30622 1438 aa9.63□□□□□ -0.87
ABCA9-201ENST00000340001 NCLP19338 710 aaKnown RBP9.63□□□□□ -0.87
ABCA9-201ENST00000340001 UPF2Q9HAU5 1272 aaKnown RBP9.63□□□□□ -0.87
ABCA9-201ENST00000340001 MYH16Q9H6N6 1097 aa9.63□□□□□ -0.87
ABCA9-201ENST00000340001 PAK3O75914 559 aaPredicted RBP9.62□□□□□ -0.87
ABCA9-201ENST00000340001 SIN3AQ96ST3 1273 aa9.61□□□□□ -0.87
ABCA9-201ENST00000340001 CEP162Q5TB80 1403 aa9.61□□□□□ -0.87
ABCA9-201ENST00000340001 OS9Q13438 667 aaPredicted RBP9.59□□□□□ -0.87
ABCA9-201ENST00000340001 PLCB2Q00722 1185 aa9.59□□□□□ -0.87
ABCA9-201ENST00000340001 SUPT16HQ9Y5B9 1047 aaKnown RBP9.59□□□□□ -0.87
ABCA9-201ENST00000340001 G3V3G9 751 aa9.58□□□□□ -0.88
ABCA9-201ENST00000340001 DCAF8Q5TAQ9 597 aa9.58□□□□□ -0.88
ABCA9-201ENST00000340001 CSB-PGBD3P0DP91 1061 aa9.57□□□□□ -0.88
ABCA9-201ENST00000340001 POGKQ9P215 609 aa9.56□□□□□ -0.88
ABCA9-201ENST00000340001 TSPY4P0CV99 314 aa9.56□□□□□ -0.88
ABCA9-201ENST00000340001 TSPY10P0CW01 314 aa9.56□□□□□ -0.88
ABCA9-201ENST00000340001 FGD1P98174 961 aa9.56□□□□□ -0.88
ABCA9-201ENST00000340001 ERICH6BQ5W0A0 696 aa9.56□□□□□ -0.88
ABCA9-201ENST00000340001 ZRSR1Q15695 479 aaKnown RBP9.55□□□□□ -0.88
ABCA9-201ENST00000340001 CCDC180Q9P1Z9 1646 aa9.54□□□□□ -0.88
ABCA9-201ENST00000340001 RTN4Q9NQC3 1192 aaKnown RBP9.54□□□□□ -0.88
ABCA9-201ENST00000340001 EIF4G2P78344 907 aaKnown RBP eCLIP9.54□□□□□ -0.88
ABCA9-201ENST00000340001 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.54□□□□□ -0.88
ABCA9-201ENST00000340001 RSF1Q96T23 1441 aaPredicted RBP9.54□□□□□ -0.88
ABCA9-201ENST00000340001 PPP1R1BQ9UD71 204 aaPredicted RBP9.54□□□□□ -0.88
ABCA9-201ENST00000340001 NUTM2FA1L443 756 aa9.53□□□□□ -0.88
ABCA9-201ENST00000340001 MEX3CQ5U5Q3 659 aaKnown RBP9.53□□□□□ -0.88
ABCA9-201ENST00000340001 CC2D1BQ5T0F9 858 aaKnown RBP9.52□□□□□ -0.89
ABCA9-201ENST00000340001 STK26Q9P289 416 aa9.52□□□□□ -0.89
ABCA9-201ENST00000340001 GOLGA3Q08378 1498 aa9.52□□□□□ -0.89
ABCA9-201ENST00000340001 TMX4Q9H1E5 349 aaPredicted RBP9.52□□□□□ -0.89
ABCA9-201ENST00000340001 APBB1O00213 710 aa9.51□□□□□ -0.89
ABCA9-201ENST00000340001 U2SURPO15042 1029 aaKnown RBP9.51□□□□□ -0.89
ABCA9-201ENST00000340001 KCNJ4P48050 445 aa9.5□□□□□ -0.89
ABCA9-201ENST00000340001 SAMD1Q6SPF0 538 aaPredicted RBP9.5□□□□□ -0.89
ABCA9-201ENST00000340001 RAD21O60216 631 aa9.49□□□□□ -0.89
ABCA9-201ENST00000340001 FOXD1Q16676 465 aa9.49□□□□□ -0.89
ABCA9-201ENST00000340001 CNKSR2Q8WXI2 1034 aa9.48□□□□□ -0.89
ABCA9-201ENST00000340001 VPS53Q5VIR6 699 aa9.48□□□□□ -0.89
ABCA9-201ENST00000340001 B4GALNT3Q6L9W6 998 aa9.48□□□□□ -0.89
ABCA9-201ENST00000340001 CHMP3Q9Y3E7 222 aa9.48□□□□□ -0.89
ABCA9-201ENST00000340001 ABCC8Q09428 1581 aa9.48□□□□□ -0.89
ABCA9-201ENST00000340001 NUTM2DQ5VT03 806 aaPredicted RBP9.47□□□□□ -0.89
ABCA9-201ENST00000340001 CARD11Q9BXL7 1154 aa9.47□□□□□ -0.89
ABCA9-201ENST00000340001 EIF4G1Q04637 1599 aaKnown RBP9.46□□□□□ -0.89
ABCA9-201ENST00000340001 WRNQ14191 1432 aaPredicted RBP eCLIP9.46□□□□□ -0.89
ABCA9-201ENST00000340001 RGS3P49796 1198 aa9.46□□□□□ -0.89
ABCA9-201ENST00000340001 FRAT1Q92837 279 aaPredicted RBP9.46□□□□□ -0.9
ABCA9-201ENST00000340001 SOGA1O94964 1423 aa9.46□□□□□ -0.9
ABCA9-201ENST00000340001 RB1CC1Q8TDY2 1594 aa9.45□□□□□ -0.9
ABCA9-201ENST00000340001 FBXW7Q969H0 707 aa9.45□□□□□ -0.9
ABCA9-201ENST00000340001 DCAF8L1A6NGE4 600 aa9.45□□□□□ -0.9
ABCA9-201ENST00000340001 PTMAP06454 111 aaKnown RBP9.44□□□□□ -0.9
ABCA9-201ENST00000340001 DNTTIP2Q5QJE6 756 aaKnown RBP9.44□□□□□ -0.9
ABCA9-201ENST00000340001 BAZ1BQ9UIG0 1483 aaKnown RBP9.44□□□□□ -0.9
ABCA9-201ENST00000340001 SPRYD3Q8NCJ5 442 aa9.44□□□□□ -0.9
ABCA9-201ENST00000340001 FTSJ3Q8IY81 847 aaKnown RBP9.43□□□□□ -0.9
ABCA9-201ENST00000340001 LTV1Q96GA3 475 aaPredicted RBP9.43□□□□□ -0.9
ABCA9-201ENST00000340001 GGT6Q6P531 493 aa9.43□□□□□ -0.9
ABCA9-201ENST00000340001 CFDP1Q9UEE9 299 aaPredicted RBP9.43□□□□□ -0.9
ABCA9-201ENST00000340001 CECR2Q9BXF3 1484 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms