RNA–Protein interactions for RNA: ENST00000325942.10

FRAS1-201, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene FRAS1, Length 7,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-201ENST00000325942 KRI1Q8N9T8 703 aaKnown RBP12.91□□□□□ -0.34
FRAS1-201ENST00000325942 TMC1Q8TDI8 760 aa12.91□□□□□ -0.34
FRAS1-201ENST00000325942 EIF5BO60841 1220 aaKnown RBP12.91□□□□□ -0.34
FRAS1-201ENST00000325942 LAS1LQ9Y4W2 734 aaKnown RBP12.9□□□□□ -0.34
FRAS1-201ENST00000325942 GOLGA2Q08379 1002 aa12.89□□□□□ -0.35
FRAS1-201ENST00000325942 FAM9BQ8IZU0 186 aa12.89□□□□□ -0.35
FRAS1-201ENST00000325942 NAP1L2Q9ULW6 460 aaPredicted RBP12.87□□□□□ -0.35
FRAS1-201ENST00000325942 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
FRAS1-201ENST00000325942 ZNF330Q9Y3S2 320 aaPredicted RBP12.84□□□□□ -0.35
FRAS1-201ENST00000325942 PDE4CQ08493 712 aa12.83□□□□□ -0.36
FRAS1-201ENST00000325942 UPF2Q9HAU5 1272 aaKnown RBP12.83□□□□□ -0.36
FRAS1-201ENST00000325942 MYH16Q9H6N6 1097 aa12.82□□□□□ -0.36
FRAS1-201ENST00000325942 NBR1Q14596 966 aa12.82□□□□□ -0.36
FRAS1-201ENST00000325942 FBXO3Q9UK99 471 aa12.82□□□□□ -0.36
FRAS1-201ENST00000325942 ANP32AP39687 249 aaKnown RBP12.82□□□□□ -0.36
FRAS1-201ENST00000325942 WDR43Q15061 677 aaKnown RBP eCLIP12.81□□□□□ -0.361e-5■■■■□ 24.6
FRAS1-201ENST00000325942 CHMP7Q8WUX9 453 aaPredicted RBP12.81□□□□□ -0.36
FRAS1-201ENST00000325942 TNNT2P45379 298 aaPredicted RBP12.76□□□□□ -0.37
FRAS1-201ENST00000325942 RGL3Q3MIN7 710 aa12.75□□□□□ -0.37
FRAS1-201ENST00000325942 MSH5O43196 834 aa12.74□□□□□ -0.37
FRAS1-201ENST00000325942 NCLP19338 710 aaKnown RBP12.72□□□□□ -0.37
FRAS1-201ENST00000325942 G3V3G9 751 aa12.72□□□□□ -0.37
FRAS1-201ENST00000325942 DCAF8Q5TAQ9 597 aa12.72□□□□□ -0.37
FRAS1-201ENST00000325942 OS9Q13438 667 aaPredicted RBP12.71□□□□□ -0.37
FRAS1-201ENST00000325942 PAK3O75914 559 aaPredicted RBP12.71□□□□□ -0.38
FRAS1-201ENST00000325942 ZRSR1Q15695 479 aaKnown RBP12.7□□□□□ -0.38
FRAS1-201ENST00000325942 HIRIP3Q9BW71 556 aaPredicted RBP12.7□□□□□ -0.38
FRAS1-201ENST00000325942 NEUROD2Q15784 382 aa12.69□□□□□ -0.38
FRAS1-201ENST00000325942 TMX4Q9H1E5 349 aaPredicted RBP12.68□□□□□ -0.38
FRAS1-201ENST00000325942 IRX6P78412 446 aaPredicted RBP12.68□□□□□ -0.38
FRAS1-201ENST00000325942 MEX3CQ5U5Q3 659 aaKnown RBP12.68□□□□□ -0.38
FRAS1-201ENST00000325942 WWC1Q8IX03 1113 aa12.66□□□□□ -0.38
FRAS1-201ENST00000325942 SAFB2Q14151 953 aaKnown RBP eCLIP12.66□□□□□ -0.38
FRAS1-201ENST00000325942 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.66□□□□□ -0.38
FRAS1-201ENST00000325942 FGD1P98174 961 aa12.65□□□□□ -0.38
FRAS1-201ENST00000325942 HNRNPUQ00839 825 aaKnown RBP eCLIP12.65□□□□□ -0.38
FRAS1-201ENST00000325942 PLCB2Q00722 1185 aa12.65□□□□□ -0.38
FRAS1-201ENST00000325942 POGKQ9P215 609 aa12.64□□□□□ -0.39
FRAS1-201ENST00000325942 CSB-PGBD3P0DP91 1061 aa12.64□□□□□ -0.39
FRAS1-201ENST00000325942 TSPY4P0CV99 314 aa12.62□□□□□ -0.39
FRAS1-201ENST00000325942 TSPY10P0CW01 314 aa12.62□□□□□ -0.39
FRAS1-201ENST00000325942 GTF3C3Q9Y5Q9 886 aa12.62□□□□□ -0.39
FRAS1-201ENST00000325942 TONSLQ96HA7 1378 aa12.61□□□□□ -0.39
FRAS1-201ENST00000325942 DCAF8L1A6NGE4 600 aa12.6□□□□□ -0.39
FRAS1-201ENST00000325942 CNKSR2Q8WXI2 1034 aa12.59□□□□□ -0.39
FRAS1-201ENST00000325942 FKBP8Q14318 412 aa12.59□□□□□ -0.39
FRAS1-201ENST00000325942 KCNJ4P48050 445 aa12.58□□□□□ -0.4
FRAS1-201ENST00000325942 ERICH6BQ5W0A0 696 aa12.58□□□□□ -0.4
FRAS1-201ENST00000325942 DDX10Q13206 875 aaKnown RBP12.58□□□□□ -0.4
FRAS1-201ENST00000325942 VPS53Q5VIR6 699 aa12.56□□□□□ -0.4
FRAS1-201ENST00000325942 RRP7BPQ9NSQ0 103 aa12.56□□□□□ -0.4
FRAS1-201ENST00000325942 PPP1R1BQ9UD71 204 aaPredicted RBP12.55□□□□□ -0.4
FRAS1-201ENST00000325942 ERCC6Q03468 1493 aa12.54□□□□□ -0.4
FRAS1-201ENST00000325942 U2SURPO15042 1029 aaKnown RBP12.54□□□□□ -0.4
FRAS1-201ENST00000325942 STK26Q9P289 416 aa12.53□□□□□ -0.4
FRAS1-201ENST00000325942 CHMP3Q9Y3E7 222 aa12.53□□□□□ -0.4
FRAS1-201ENST00000325942 PTMAP06454 111 aaKnown RBP12.53□□□□□ -0.4
FRAS1-201ENST00000325942 CCDC136Q96JN2 1154 aa12.53□□□□□ -0.4
FRAS1-201ENST00000325942 DNTTIP2Q5QJE6 756 aaKnown RBP12.52□□□□□ -0.4
FRAS1-201ENST00000325942 FTSJ3Q8IY81 847 aaKnown RBP12.52□□□□□ -0.4
FRAS1-201ENST00000325942 RAD21O60216 631 aa12.52□□□□□ -0.41
FRAS1-201ENST00000325942 FBXW7Q969H0 707 aa12.5□□□□□ -0.41
FRAS1-201ENST00000325942 TRIM44Q96DX7 344 aaPredicted RBP12.5□□□□□ -0.41
FRAS1-201ENST00000325942 CASC1Q6TDU7 716 aa12.5□□□□□ -0.41
FRAS1-201ENST00000325942 CWC22Q9HCG8 908 aaKnown RBP12.49□□□□□ -0.41
FRAS1-201ENST00000325942 APBB1O00213 710 aa12.49□□□□□ -0.41
FRAS1-201ENST00000325942 SAMD1Q6SPF0 538 aaPredicted RBP12.49□□□□□ -0.41
FRAS1-201ENST00000325942 GNL2Q13823 731 aaKnown RBP12.48□□□□□ -0.41
FRAS1-201ENST00000325942 NUTM2FA1L443 756 aa12.47□□□□□ -0.41
FRAS1-201ENST00000325942 MAPK8IP3Q9UPT6 1336 aa12.45□□□□□ -0.42
FRAS1-201ENST00000325942 FRAT1Q92837 279 aaPredicted RBP12.45□□□□□ -0.42
FRAS1-201ENST00000325942 CREBRFQ8IUR6 639 aa12.44□□□□□ -0.42
FRAS1-201ENST00000325942 MRS2Q9HD23 443 aa12.44□□□□□ -0.42
FRAS1-201ENST00000325942 FRAT2O75474 233 aaPredicted RBP12.44□□□□□ -0.42
FRAS1-201ENST00000325942 GTF2E1P29083 439 aaPredicted RBP12.44□□□□□ -0.42
FRAS1-201ENST00000325942 SRPK2P78362 688 aaKnown RBP12.43□□□□□ -0.42
FRAS1-201ENST00000325942 CFAP53Q96M91 514 aa12.43□□□□□ -0.42
FRAS1-201ENST00000325942 CC2D1BQ5T0F9 858 aaKnown RBP12.42□□□□□ -0.42
FRAS1-201ENST00000325942 EIF4G2P78344 907 aaKnown RBP eCLIP12.42□□□□□ -0.42
FRAS1-201ENST00000325942 TAF7LQ5H9L4 462 aa12.42□□□□□ -0.42
FRAS1-201ENST00000325942 NOC3LQ8WTT2 800 aaKnown RBP12.41□□□□□ -0.42
FRAS1-201ENST00000325942 NUTM2DQ5VT03 806 aaPredicted RBP12.41□□□□□ -0.42
FRAS1-201ENST00000325942 LTV1Q96GA3 475 aaPredicted RBP12.4□□□□□ -0.42
FRAS1-201ENST00000325942 SPRYD3Q8NCJ5 442 aa12.4□□□□□ -0.43
FRAS1-201ENST00000325942 EVA1CP58658 441 aa12.39□□□□□ -0.43
FRAS1-201ENST00000325942 SCRIBQ14160 1630 aa12.39□□□□□ -0.43
FRAS1-201ENST00000325942 SYTL4Q96C24 671 aaPredicted RBP12.39□□□□□ -0.43
FRAS1-201ENST00000325942 GGT6Q6P531 493 aa12.39□□□□□ -0.43
FRAS1-201ENST00000325942 PLEKHD1A6NEE1 506 aa12.38□□□□□ -0.43
FRAS1-201ENST00000325942 MTUS2Q5JR59 1369 aa12.37□□□□□ -0.43
FRAS1-201ENST00000325942 GORABQ5T7V8 394 aa12.36□□□□□ -0.43
FRAS1-201ENST00000325942 RTF1Q92541 710 aaKnown RBP12.36□□□□□ -0.43
FRAS1-201ENST00000325942 KNSTRNQ9Y448 316 aa12.36□□□□□ -0.43
FRAS1-201ENST00000325942 WDR70Q9NW82 654 aa12.34□□□□□ -0.43
FRAS1-201ENST00000325942 CTDP1Q9Y5B0 961 aaPredicted RBP12.34□□□□□ -0.43
FRAS1-201ENST00000325942 HSP90B1P14625 803 aaKnown RBP12.33□□□□□ -0.44
FRAS1-201ENST00000325942 DRC7Q8IY82 874 aa12.33□□□□□ -0.44
FRAS1-201ENST00000325942 PNNQ9H307 717 aaKnown RBP12.33□□□□□ -0.44
FRAS1-201ENST00000325942 GOLGA6L22H0YM25 854 aa12.32□□□□□ -0.44
FRAS1-201ENST00000325942 TOMM22Q9NS69 142 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms