RNA–Protein interactions for RNA: ENSMUST00000197054.1

Gm42949-201, mousemouse

TSL 1 (best) BASIC

Gene Gm42949, Length 2,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42949-201ENSMUST00000197054 GapdhsQ64467 440 aa9.92□□□□□ -0.82
Gm42949-201ENSMUST00000197054 Rsph6aQ8CDR2 708 aa9.92□□□□□ -0.82
Gm42949-201ENSMUST00000197054 Hdac5Q9Z2V6 1113 aa9.91□□□□□ -0.82
Gm42949-201ENSMUST00000197054 ChgaP26339 463 aaKnown RBP9.88□□□□□ -0.83
Gm42949-201ENSMUST00000197054 Nkx1-1G3UXB3 402 aa9.88□□□□□ -0.83
Gm42949-201ENSMUST00000197054 Kdm2aP59997 1161 aa9.84□□□□□ -0.83
Gm42949-201ENSMUST00000197054 Stk3Q9JI10 497 aa9.83□□□□□ -0.84
Gm42949-201ENSMUST00000197054 Cnksr2Q80YA9 1032 aa9.82□□□□□ -0.84
Gm42949-201ENSMUST00000197054 Stk25Q9Z2W1 426 aa9.8□□□□□ -0.84
Gm42949-201ENSMUST00000197054 Os9Q8K2C7 672 aa9.78□□□□□ -0.84
Gm42949-201ENSMUST00000197054 Sra1Q80VJ2 232 aa9.77□□□□□ -0.85
Gm42949-201ENSMUST00000197054 Slc7a3P70423 618 aa9.76□□□□□ -0.85
Gm42949-201ENSMUST00000197054 Ric3Q8BPM6 367 aa9.76□□□□□ -0.85
Gm42949-201ENSMUST00000197054 Npm1Q61937 292 aaKnown RBP9.76□□□□□ -0.85
Gm42949-201ENSMUST00000197054 Zc3h15Q3TIV5 426 aaKnown RBP9.75□□□□□ -0.85
Gm42949-201ENSMUST00000197054 Scaf1Q5U4C3 1256 aaKnown RBP9.75□□□□□ -0.85
Gm42949-201ENSMUST00000197054 Ggt6Q6PDE7 497 aa9.75□□□□□ -0.85
Gm42949-201ENSMUST00000197054 Arhgef1Q61210 920 aaKnown RBP9.73□□□□□ -0.85
Gm42949-201ENSMUST00000197054 Gm13697A2AK42 830 aa9.7□□□□□ -0.86
Gm42949-201ENSMUST00000197054 Stk24Q99KH8 431 aa9.7□□□□□ -0.86
Gm42949-201ENSMUST00000197054 Ak7Q9D2H2 614 aa9.7□□□□□ -0.86
Gm42949-201ENSMUST00000197054 Chrm1P12657 460 aa9.67□□□□□ -0.86
Gm42949-201ENSMUST00000197054 Zbtb7bQ64321 544 aa9.67□□□□□ -0.86
Gm42949-201ENSMUST00000197054 Slc24a3Q99PD7 645 aa9.66□□□□□ -0.86
Gm42949-201ENSMUST00000197054 Dhx30Q99PU8 1217 aaKnown RBP9.64□□□□□ -0.87
Gm42949-201ENSMUST00000197054 Hnrnpul2Q00PI9 745 aaKnown RBP9.62□□□□□ -0.87
Gm42949-201ENSMUST00000197054 Sgip1Q8VD37 806 aa9.62□□□□□ -0.87
Gm42949-201ENSMUST00000197054 Atad2Q8CDM1 1040 aa9.6□□□□□ -0.87
Gm42949-201ENSMUST00000197054 Pdap1Q3UHX2 181 aaKnown RBP9.59□□□□□ -0.87
Gm42949-201ENSMUST00000197054 Mier1Q5UAK0 511 aa9.59□□□□□ -0.87
Gm42949-201ENSMUST00000197054 TprnA2AI08 749 aaKnown RBP9.58□□□□□ -0.88
Gm42949-201ENSMUST00000197054 Apba2P98084 750 aa9.58□□□□□ -0.88
Gm42949-201ENSMUST00000197054 Gpr37l1Q99JG2 481 aa9.54□□□□□ -0.88
Gm42949-201ENSMUST00000197054 Rad21Q61550 635 aaKnown RBP9.53□□□□□ -0.88
Gm42949-201ENSMUST00000197054 PygbQ8CI94 843 aaKnown RBP9.52□□□□□ -0.88
Gm42949-201ENSMUST00000197054 Fam117aQ7TNF9 451 aa9.5□□□□□ -0.89
Gm42949-201ENSMUST00000197054 Cadps2Q8BYR5 1297 aa9.5□□□□□ -0.89
Gm42949-201ENSMUST00000197054 Bcl2l13P59017 434 aa9.48□□□□□ -0.89
Gm42949-201ENSMUST00000197054 Brpf1B2RRD7 1212 aa9.46□□□□□ -0.9
Gm42949-201ENSMUST00000197054 Cypt1Q8CH20 168 aa9.46□□□□□ -0.9
Gm42949-201ENSMUST00000197054 1700006A11RikB9EHI3 544 aa9.43□□□□□ -0.9
Gm42949-201ENSMUST00000197054 Nyap1Q6PFX7 833 aa9.43□□□□□ -0.9
Gm42949-201ENSMUST00000197054 Pelp1Q9DBD5 1123 aaKnown RBP9.41□□□□□ -0.9
Gm42949-201ENSMUST00000197054 Pcdhb17Q91VD8 799 aa9.4□□□□□ -0.91
Gm42949-201ENSMUST00000197054 DiexfQ8BTT6 772 aaKnown RBP9.39□□□□□ -0.91
Gm42949-201ENSMUST00000197054 Ccdc96Q9CR92 584 aa9.39□□□□□ -0.91
Gm42949-201ENSMUST00000197054 PrimpolQ6P1E7 537 aa9.39□□□□□ -0.91
Gm42949-201ENSMUST00000197054 CrebzfQ91ZR3 358 aa9.38□□□□□ -0.91
Gm42949-201ENSMUST00000197054 Pitpnm1O35954 1243 aa9.36□□□□□ -0.91
Gm42949-201ENSMUST00000197054 E2f4Q8R0K9 410 aa9.36□□□□□ -0.91
Gm42949-201ENSMUST00000197054 Ciz1Q8VEH2 845 aa9.35□□□□□ -0.91
Gm42949-201ENSMUST00000197054 Znf704Q9ERQ3 566 aa9.35□□□□□ -0.91
Gm42949-201ENSMUST00000197054 Erich4Q3UNU4 136 aa9.33□□□□□ -0.92
Gm42949-201ENSMUST00000197054 Nap1l5Q9JJF0 156 aa9.32□□□□□ -0.92
Gm42949-201ENSMUST00000197054 Trim35Q8C006 501 aa9.32□□□□□ -0.92
Gm42949-201ENSMUST00000197054 Rtl5Q5DTT4 599 aa9.31□□□□□ -0.92
Gm42949-201ENSMUST00000197054 Slain2Q8CI08 581 aa9.28□□□□□ -0.92
Gm42949-201ENSMUST00000197054 Speer2E9Q9U2 264 aa9.27□□□□□ -0.93
Gm42949-201ENSMUST00000197054 Ddx11Q6AXC6 880 aa9.27□□□□□ -0.93
Gm42949-201ENSMUST00000197054 Mllt3A2AM29 569 aa9.25□□□□□ -0.93
Gm42949-201ENSMUST00000197054 Slc4a5E9Q3M5 1116 aa9.25□□□□□ -0.93
Gm42949-201ENSMUST00000197054 Pde8bE9Q4S1 865 aa9.25□□□□□ -0.93
Gm42949-201ENSMUST00000197054 E9Q0B3 247 aa9.21□□□□□ -0.93
Gm42949-201ENSMUST00000197054 Rasgrp4Q8BTM9 673 aa9.21□□□□□ -0.93
Gm42949-201ENSMUST00000197054 Irx6Q9ER75 438 aa9.21□□□□□ -0.93
Gm42949-201ENSMUST00000197054 Znf330Q922H9 316 aa9.21□□□□□ -0.94
Gm42949-201ENSMUST00000197054 Irf6P97431 467 aa9.19□□□□□ -0.94
Gm42949-201ENSMUST00000197054 GopcQ8BH60 463 aa9.19□□□□□ -0.94
Gm42949-201ENSMUST00000197054 Ndufv2Q9D6J6 248 aa9.19□□□□□ -0.94
Gm42949-201ENSMUST00000197054 IncenpQ9WU62 880 aa9.19□□□□□ -0.94
Gm42949-201ENSMUST00000197054 Mink1Q9JM52 1308 aa9.19□□□□□ -0.94
Gm42949-201ENSMUST00000197054 NclP09405 707 aaKnown RBP9.17□□□□□ -0.94
Gm42949-201ENSMUST00000197054 SnphQ80U23 495 aa9.16□□□□□ -0.94
Gm42949-201ENSMUST00000197054 Tor1aip2Q8BYU6 502 aa9.16□□□□□ -0.94
Gm42949-201ENSMUST00000197054 Sptlc1O35704 473 aa9.15□□□□□ -0.95
Gm42949-201ENSMUST00000197054 Bcl11bQ99PV8 884 aa9.13□□□□□ -0.95
Gm42949-201ENSMUST00000197054 Neurod2Q62414 383 aa9.12□□□□□ -0.95
Gm42949-201ENSMUST00000197054 Pdzrn4E9PUZ9 1014 aa9.11□□□□□ -0.95
Gm42949-201ENSMUST00000197054 Znf579Q80VM4 562 aa9.11□□□□□ -0.95
Gm42949-201ENSMUST00000197054 Q8BT18 775 aa9.11□□□□□ -0.95
Gm42949-201ENSMUST00000197054 OsbpQ3B7Z2 805 aa9.1□□□□□ -0.95
Gm42949-201ENSMUST00000197054 Tulp1Q9Z273 543 aa9.09□□□□□ -0.95
Gm42949-201ENSMUST00000197054 Bclaf1Q8K019 919 aaKnown RBP9.09□□□□□ -0.95
Gm42949-201ENSMUST00000197054 Pcdhb20Q91XZ9 799 aa9.09□□□□□ -0.95
Gm42949-201ENSMUST00000197054 Tox2A2A472 547 aa9.08□□□□□ -0.96
Gm42949-201ENSMUST00000197054 Cacnb1Q8R3Z5 597 aa9.08□□□□□ -0.96
Gm42949-201ENSMUST00000197054 Gm13695A2AK44 830 aa9.08□□□□□ -0.96
Gm42949-201ENSMUST00000197054 Tpcn2Q8BWC0 731 aa9.06□□□□□ -0.96
Gm42949-201ENSMUST00000197054 Gimap6Q8K349 305 aa9.05□□□□□ -0.96
Gm42949-201ENSMUST00000197054 Pcmtd1P59913 357 aa9.05□□□□□ -0.96
Gm42949-201ENSMUST00000197054 Kcnv2Q8CFS6 562 aa9.05□□□□□ -0.96
Gm42949-201ENSMUST00000197054 Pdia6Q922R8 440 aaKnown RBP9.05□□□□□ -0.96
Gm42949-201ENSMUST00000197054 Prom2Q3UUY6 835 aa9.04□□□□□ -0.96
Gm42949-201ENSMUST00000197054 Prr7Q3V0I2 269 aa9.02□□□□□ -0.97
Gm42949-201ENSMUST00000197054 Gpr37Q9QY42 600 aa9.01□□□□□ -0.97
Gm42949-201ENSMUST00000197054 Prim1P20664 417 aa9□□□□□ -0.97
Gm42949-201ENSMUST00000197054 Secisbp2lQ6A098 1086 aaKnown RBP9□□□□□ -0.97
Gm42949-201ENSMUST00000197054 Ppfia1B2RXQ2 1266 aa8.98□□□□□ -0.97
Gm42949-201ENSMUST00000197054 Dixdc1Q80Y83 711 aa8.97□□□□□ -0.97
Gm42949-201ENSMUST00000197054 XpcP51612 930 aa8.97□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 85.3 ms