RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 TRAV12-1A0A0B4J245 112 aa12.3□□□□□ -0.44
PHGDH-234ENST00000642041 LY6G6CO95867 125 aa12.3□□□□□ -0.44
PHGDH-234ENST00000642041 PRSS1P07477 247 aa12.3□□□□□ -0.44
PHGDH-234ENST00000642041 CRYBA4P53673 196 aa12.3□□□□□ -0.44
PHGDH-234ENST00000642041 RPL36AP83881 106 aaKnown RBP12.3□□□□□ -0.44
PHGDH-234ENST00000642041 RPL36ALQ969Q0 106 aaKnown RBP12.3□□□□□ -0.44
PHGDH-234ENST00000642041 RPL39LQ96EH5 51 aaKnown RBP12.3□□□□□ -0.44
PHGDH-234ENST00000642041 TRGV2A0A075B6R0 118 aa12.29□□□□□ -0.44
PHGDH-234ENST00000642041 TRBV6-4A0A1B0GX49 114 aa12.29□□□□□ -0.44
PHGDH-234ENST00000642041 IGHV4-30-4P0DP06 118 aa12.29□□□□□ -0.44
PHGDH-234ENST00000642041 TMEM97Q5BJF2 176 aa12.29□□□□□ -0.44
PHGDH-234ENST00000642041 SCGB3A1Q96QR1 104 aa12.29□□□□□ -0.44
PHGDH-234ENST00000642041 TIMM17AQ99595 171 aa12.29□□□□□ -0.44
PHGDH-234ENST00000642041 TP53TG1Q9Y2A0 90 aa12.29□□□□□ -0.44
PHGDH-234ENST00000642041 GAS8-AS1O95177 125 aa12.28□□□□□ -0.44
PHGDH-234ENST00000642041 C2orf66Q6UXQ4 117 aa12.28□□□□□ -0.44
PHGDH-234ENST00000642041 DAZ4Q86SG3 579 aaKnown RBP12.28□□□□□ -0.44
PHGDH-234ENST00000642041 ZNF664Q8N3J9 261 aa12.28□□□□□ -0.44
PHGDH-234ENST00000642041 Q8N976 141 aa12.28□□□□□ -0.44
PHGDH-234ENST00000642041 NOP10Q9NPE3 64 aaKnown RBP12.28□□□□□ -0.44
PHGDH-234ENST00000642041 DAZ3Q9NR90 486 aaKnown RBP12.28□□□□□ -0.44
PHGDH-234ENST00000642041 MRPL16Q9NX20 251 aaKnown RBP12.28□□□□□ -0.44
PHGDH-234ENST00000642041 MRPL52Q86TS9 123 aaKnown RBP12.26□□□□□ -0.45
PHGDH-234ENST00000642041 LINC00612Q8N6U2 182 aa12.26□□□□□ -0.45
PHGDH-234ENST00000642041 PMCHL2Q9BQD1 86 aa12.26□□□□□ -0.45
PHGDH-234ENST00000642041 PRADC1Q9BSG0 188 aa12.26□□□□□ -0.45
PHGDH-234ENST00000642041 TRBV7-3A0A075B6L6 115 aa12.25□□□□□ -0.45
PHGDH-234ENST00000642041 PLNP26678 52 aa12.25□□□□□ -0.45
PHGDH-234ENST00000642041 COTL1Q14019 142 aa12.25□□□□□ -0.45
PHGDH-234ENST00000642041 PYGO1Q9Y3Y4 419 aa12.25□□□□□ -0.45
PHGDH-234ENST00000642041 PLAC8L1A1L4L8 177 aa12.24□□□□□ -0.45
PHGDH-234ENST00000642041 PCP4L1A6NKN8 68 aa12.24□□□□□ -0.45
PHGDH-234ENST00000642041 K7EQD1 137 aa12.24□□□□□ -0.45
PHGDH-234ENST00000642041 SPATA45Q537H7 98 aa12.24□□□□□ -0.45
PHGDH-234ENST00000642041 RNF183Q96D59 192 aa12.24□□□□□ -0.45
PHGDH-234ENST00000642041 UQCR10Q9UDW1 63 aa12.24□□□□□ -0.45
PHGDH-234ENST00000642041 A0A087WX48 190 aa12.23□□□□□ -0.45
PHGDH-234ENST00000642041 DDTP30046 118 aa12.23□□□□□ -0.45
PHGDH-234ENST00000642041 Q6ZTI0 123 aa12.23□□□□□ -0.45
PHGDH-234ENST00000642041 C20orf203Q8NBC4 194 aa12.23□□□□□ -0.45
PHGDH-234ENST00000642041 MIEN1Q9BRT3 115 aa12.23□□□□□ -0.45
PHGDH-234ENST00000642041 TRGV4A0A0C4DH28 118 aa12.22□□□□□ -0.45
PHGDH-234ENST00000642041 H7C423 109 aa12.22□□□□□ -0.45
PHGDH-234ENST00000642041 DPM2O94777 84 aa12.22□□□□□ -0.45
PHGDH-234ENST00000642041 NEXN-AS1Q8NBZ9 246 aa12.22□□□□□ -0.45
PHGDH-234ENST00000642041 GTSF1LQ9H1H1 148 aa12.22□□□□□ -0.45
PHGDH-234ENST00000642041 PAM16Q9Y3D7 125 aa12.22□□□□□ -0.45
PHGDH-234ENST00000642041 X6R8D5 127 aa12.22□□□□□ -0.45
PHGDH-234ENST00000642041 OR11H2Q8NH07 326 aa12.21□□□□□ -0.45
PHGDH-234ENST00000642041 TIMM21Q9BVV7 248 aa12.21□□□□□ -0.45
PHGDH-234ENST00000642041 SPANXA1Q9NS26 97 aa12.21□□□□□ -0.45
PHGDH-234ENST00000642041 GAGE12BA1L429 117 aa12.2□□□□□ -0.46
PHGDH-234ENST00000642041 F8VRH5 84 aa12.2□□□□□ -0.46
PHGDH-234ENST00000642041 GAGE7O76087 117 aa12.2□□□□□ -0.46
PHGDH-234ENST00000642041 IGKCP01834 107 aa12.2□□□□□ -0.46
PHGDH-234ENST00000642041 GAGE12FP0CL80 117 aa12.2□□□□□ -0.46
PHGDH-234ENST00000642041 GAGE12GP0CL81 117 aa12.2□□□□□ -0.46
PHGDH-234ENST00000642041 GAGE12IP0CL82 117 aa12.2□□□□□ -0.46
PHGDH-234ENST00000642041 LBHQ53QV2 105 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-234ENST00000642041 LINC00173Q6ZV60 143 aa12.2□□□□□ -0.46
PHGDH-234ENST00000642041 IGIPA6NJ69 53 aa12.19□□□□□ -0.46
PHGDH-234ENST00000642041 TSHBP01222 138 aa12.19□□□□□ -0.46
PHGDH-234ENST00000642041 SPART-AS1P0CW21 52 aa12.19□□□□□ -0.46
PHGDH-234ENST00000642041 PMVKQ15126 192 aa12.19□□□□□ -0.46
PHGDH-234ENST00000642041 SH2D6Q7Z4S9 175 aa12.19□□□□□ -0.46
PHGDH-234ENST00000642041 ZNF479Q96JC4 524 aa12.19□□□□□ -0.46
PHGDH-234ENST00000642041 IGHV3-73A0A0B4J1V6 119 aa12.18□□□□□ -0.46
PHGDH-234ENST00000642041 PRM2P04554 102 aa12.18□□□□□ -0.46
PHGDH-234ENST00000642041 ODF1Q14990 250 aa12.18□□□□□ -0.46
PHGDH-234ENST00000642041 CDPF1Q6NVV7 123 aa12.18□□□□□ -0.46
PHGDH-234ENST00000642041 VPS13DQ5THJ4 4388 aa12.17□□□□□ -0.46
PHGDH-234ENST00000642041 H0Y8G0 127 aa12.17□□□□□ -0.46
PHGDH-234ENST00000642041 SLC25A29Q8N8R3 303 aa12.17□□□□□ -0.46
PHGDH-234ENST00000642041 ZNRF2Q8NHG8 242 aa12.17□□□□□ -0.46
PHGDH-234ENST00000642041 PRO0255Q9UI72 69 aa12.17□□□□□ -0.46
PHGDH-234ENST00000642041 CHTOPQ9Y3Y2 248 aaKnown RBP12.17□□□□□ -0.46
PHGDH-234ENST00000642041 CSDC2Q9Y534 153 aaKnown RBP12.17□□□□□ -0.46
PHGDH-234ENST00000642041 PKHD1P08F94 4074 aa12.16□□□□□ -0.46
PHGDH-234ENST00000642041 IGLC3P0DOY3 106 aa12.16□□□□□ -0.46
PHGDH-234ENST00000642041 DLEU1O43261 78 aa12.15□□□□□ -0.46
PHGDH-234ENST00000642041 UBE2D3P61077 147 aa12.15□□□□□ -0.46
PHGDH-234ENST00000642041 UBE2D2P62837 147 aa12.15□□□□□ -0.46
PHGDH-234ENST00000642041 DEFB135Q30KP9 77 aa12.15□□□□□ -0.46
PHGDH-234ENST00000642041 VCX2Q9H322 139 aa12.15□□□□□ -0.46
PHGDH-234ENST00000642041 PRO1933Q9H354 126 aa12.15□□□□□ -0.46
PHGDH-234ENST00000642041 RETNQ9HD89 108 aa12.15□□□□□ -0.46
PHGDH-234ENST00000642041 HHLA3Q9XRX5 114 aa12.15□□□□□ -0.46
PHGDH-234ENST00000642041 NACAE9PAV3 2078 aa12.14□□□□□ -0.47
PHGDH-234ENST00000642041 SIVA1O15304 175 aa12.14□□□□□ -0.47
PHGDH-234ENST00000642041 HERVK_113P61574 105 aa12.14□□□□□ -0.47
PHGDH-234ENST00000642041 SEC11AP67812 179 aa12.14□□□□□ -0.47
PHGDH-234ENST00000642041 MRPS36P82909 103 aaKnown RBP12.14□□□□□ -0.47
PHGDH-234ENST00000642041 FHL2Q14192 279 aa12.14□□□□□ -0.47
PHGDH-234ENST00000642041 SLC25A34Q6PIV7 304 aa12.14□□□□□ -0.47
PHGDH-234ENST00000642041 BAALCQ8WXS3 180 aa12.14□□□□□ -0.47
PHGDH-234ENST00000642041 DKK2Q9UBU2 259 aa12.14□□□□□ -0.47
PHGDH-234ENST00000642041 ATP5G1P05496 136 aa12.13□□□□□ -0.47
PHGDH-234ENST00000642041 DAD1P61803 113 aa12.13□□□□□ -0.47
PHGDH-234ENST00000642041 DGAT2L7PQ6IED9 249 aa12.13□□□□□ -0.47
PHGDH-234ENST00000642041 Q6ZSN1 163 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms