RNA–Protein interactions for RNA: ENST00000638084.1

LINC00598-215, long intergenic non-protein coding RNA 598, humanhuman

TSL 5 BASIC

Gene LINC00598, Length 1,974 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-215ENST00000638084 H3BMM0 161 aa5.37□□□□□ -1.55
LINC00598-215ENST00000638084 UBE2E2Q96LR5 201 aa5.37□□□□□ -1.55
LINC00598-215ENST00000638084 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.37□□□□□ -1.55
LINC00598-215ENST00000638084 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.36□□□□□ -1.55
LINC00598-215ENST00000638084 IGHV1-58A0A0C4DH39 117 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 CD28P10747 220 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 RNASE13Q5GAN3 156 aaKnown RBP5.36□□□□□ -1.55
LINC00598-215ENST00000638084 Q5PR19 223 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 PIK3CD-AS1Q5SR53 167 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 C18orf65Q6ZTR6 163 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 ZNF843Q8N446 348 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 TIMM21Q9BVV7 248 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 UBE2D4Q9Y2X8 147 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 CSPG4Q6UVK1 2322 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 TINCRA0A1B0GVN0 87 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 A8MZ25 164 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 H7C2G1 150 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 TRIAP1O43715 76 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 FSHBP01225 129 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 DEFB131AP59861 70 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 LINC01620Q4KN68 170 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 LINC01356Q8N9X3 169 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 VSIG2Q96IQ7 327 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 SPANXDQ9BXN6 97 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 SPANXCQ9NY87 97 aa5.36□□□□□ -1.55
LINC00598-215ENST00000638084 CRYBG3Q68DQ2 2970 aa5.35□□□□□ -1.55
LINC00598-215ENST00000638084 SPG11Q96JI7 2443 aa5.35□□□□□ -1.55
LINC00598-215ENST00000638084 HTN1P15515 57 aa5.35□□□□□ -1.55
LINC00598-215ENST00000638084 DSCR9P59020 149 aa5.35□□□□□ -1.55
LINC00598-215ENST00000638084 C11orf72Q8NBR9 251 aa5.35□□□□□ -1.55
LINC00598-215ENST00000638084 CITED1Q99966 193 aa5.35□□□□□ -1.55
LINC00598-215ENST00000638084 GEMIN7Q9H840 131 aaKnown RBP5.35□□□□□ -1.55
LINC00598-215ENST00000638084 NDUFA12Q9UI09 145 aa5.35□□□□□ -1.55
LINC00598-215ENST00000638084 VPREB3Q9UKI3 123 aa5.35□□□□□ -1.55
LINC00598-215ENST00000638084 TNFRSF18Q9Y5U5 241 aa5.35□□□□□ -1.55
LINC00598-215ENST00000638084 NACAE9PAV3 2078 aa5.35□□□□□ -1.55
LINC00598-215ENST00000638084 SLURP1P55000 103 aa5.35□□□□□ -1.55
LINC00598-215ENST00000638084 ATXN8Q156A1 80 aa5.35□□□□□ -1.55
LINC00598-215ENST00000638084 BEAN1Q3B7T3 259 aa5.35□□□□□ -1.55
LINC00598-215ENST00000638084 Q6YL49 198 aa5.35□□□□□ -1.55
LINC00598-215ENST00000638084 Q6ZSV7 163 aa5.35□□□□□ -1.55
LINC00598-215ENST00000638084 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.35□□□□□ -1.55
LINC00598-215ENST00000638084 RNF183Q96D59 192 aa5.35□□□□□ -1.55
LINC00598-215ENST00000638084 LINC00467Q9BRT7 94 aa5.35□□□□□ -1.55
LINC00598-215ENST00000638084 SPANXA1Q9NS26 97 aa5.35□□□□□ -1.55
LINC00598-215ENST00000638084 HELZ2Q9BYK8 2649 aaKnown RBP5.34□□□□□ -1.55
LINC00598-215ENST00000638084 MAP1AP78559 2803 aaPredicted RBP5.34□□□□□ -1.55
LINC00598-215ENST00000638084 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.34□□□□□ -1.55
LINC00598-215ENST00000638084 IGKV2-29A2NJV5 120 aaPredicted RBP5.34□□□□□ -1.55
LINC00598-215ENST00000638084 TMEM262E9PQX1 116 aa5.34□□□□□ -1.55
LINC00598-215ENST00000638084 J3QLI3 93 aa5.34□□□□□ -1.55
LINC00598-215ENST00000638084 IGHV3-53P01767 116 aa5.34□□□□□ -1.55
LINC00598-215ENST00000638084 PRSS2P07478 247 aa5.34□□□□□ -1.55
LINC00598-215ENST00000638084 RPL13AP40429 203 aaKnown RBP5.34□□□□□ -1.55
LINC00598-215ENST00000638084 MIAQ16674 131 aa5.34□□□□□ -1.55
LINC00598-215ENST00000638084 DEFB136Q30KP8 78 aa5.34□□□□□ -1.55
LINC00598-215ENST00000638084 MAPK1IP1LQ8NDC0 245 aa5.34□□□□□ -1.55
LINC00598-215ENST00000638084 NTN5Q8WTR8 489 aaPredicted RBP5.34□□□□□ -1.55
LINC00598-215ENST00000638084 TENM4Q6N022 2769 aa5.34□□□□□ -1.56
LINC00598-215ENST00000638084 UBR5O95071 2799 aaPredicted RBP5.33□□□□□ -1.56
LINC00598-215ENST00000638084 GCN1Q92616 2671 aaKnown RBP5.33□□□□□ -1.56
LINC00598-215ENST00000638084 IGLV5-45A0A087WSX0 123 aa5.33□□□□□ -1.56
LINC00598-215ENST00000638084 TRAV26-1A0A087WT03 109 aa5.33□□□□□ -1.56
LINC00598-215ENST00000638084 TRBV10-2A0A0K0K1G8 114 aa5.33□□□□□ -1.56
LINC00598-215ENST00000638084 ZFAND6Q6FIF0 208 aa5.33□□□□□ -1.56
LINC00598-215ENST00000638084 TMEM61Q8N0U2 210 aa5.33□□□□□ -1.56
LINC00598-215ENST00000638084 DUX3Q96PT4 197 aa5.33□□□□□ -1.56
LINC00598-215ENST00000638084 PRRC2AP48634 2157 aaKnown RBP5.33□□□□□ -1.56
LINC00598-215ENST00000638084 TEX49A0A1B0GTD5 131 aa5.33□□□□□ -1.56
LINC00598-215ENST00000638084 H7C423 109 aa5.33□□□□□ -1.56
LINC00598-215ENST00000638084 RS1O15537 224 aa5.33□□□□□ -1.56
LINC00598-215ENST00000638084 TIMM17BO60830 172 aa5.33□□□□□ -1.56
LINC00598-215ENST00000638084 Q8N2B8 174 aa5.33□□□□□ -1.56
LINC00598-215ENST00000638084 BEX4Q9NWD9 120 aaPredicted RBP5.33□□□□□ -1.56
LINC00598-215ENST00000638084 CDKN2A-AS1Q9UH64 79 aa5.33□□□□□ -1.56
LINC00598-215ENST00000638084 ICOSQ9Y6W8 199 aa5.33□□□□□ -1.56
LINC00598-215ENST00000638084 IGHV3-38A0A0C4DH36 116 aa5.32□□□□□ -1.56
LINC00598-215ENST00000638084 CRLF1O75462 422 aa5.32□□□□□ -1.56
LINC00598-215ENST00000638084 TIRAPP58753 221 aa5.32□□□□□ -1.56
LINC00598-215ENST00000638084 COX6A2Q02221 97 aa5.32□□□□□ -1.56
LINC00598-215ENST00000638084 ZNF415Q09FC8 603 aa5.32□□□□□ -1.56
LINC00598-215ENST00000638084 Q1RN00 199 aa5.32□□□□□ -1.56
LINC00598-215ENST00000638084 TMEM101Q96IK0 257 aa5.32□□□□□ -1.56
LINC00598-215ENST00000638084 DNAJC30Q96LL9 226 aa5.32□□□□□ -1.56
LINC00598-215ENST00000638084 MAP6D1Q9H9H5 199 aa5.32□□□□□ -1.56
LINC00598-215ENST00000638084 FASNP49327 2511 aaKnown RBP5.32□□□□□ -1.56
LINC00598-215ENST00000638084 LRRK2Q5S007 2527 aa5.31□□□□□ -1.56
LINC00598-215ENST00000638084 IGHV3OR16-12A0A075B7B8 117 aa5.31□□□□□ -1.56
LINC00598-215ENST00000638084 NHLRC4P0CG21 123 aaPredicted RBP5.31□□□□□ -1.56
LINC00598-215ENST00000638084 CLUHP3Q96NS8 147 aa5.31□□□□□ -1.56
LINC00598-215ENST00000638084 CITED2Q99967 270 aaPredicted RBP5.31□□□□□ -1.56
LINC00598-215ENST00000638084 TRAV4A0A0B4J268 109 aa5.31□□□□□ -1.56
LINC00598-215ENST00000638084 IGLV5-39A0A0G2JS06 123 aa5.31□□□□□ -1.56
LINC00598-215ENST00000638084 NDUFA1O15239 70 aa5.31□□□□□ -1.56
LINC00598-215ENST00000638084 NPC2P61916 151 aa5.31□□□□□ -1.56
LINC00598-215ENST00000638084 DEFB114Q30KQ6 69 aa5.31□□□□□ -1.56
LINC00598-215ENST00000638084 CLEC2BQ92478 149 aa5.31□□□□□ -1.56
LINC00598-215ENST00000638084 LINC01587Q99440 93 aa5.31□□□□□ -1.56
LINC00598-215ENST00000638084 UTP20O75691 2785 aaKnown RBP5.31□□□□□ -1.56
LINC00598-215ENST00000638084 USP9XQ93008 2570 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms