RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 SRCAPQ6ZRS2 3230 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 CLTCQ00610 1675 aaKnown RBP0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 SHPRHQ149N8 1683 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 ANKRD11Q6UB99 2663 aaPredicted RBP0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 PLXNB2O15031 1838 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 WNK3Q9BYP7 1800 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 CCDC168Q8NDH2 2452 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 MRC1P22897 1456 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 GOLGA3Q08378 1498 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 ALKQ9UM73 1620 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 PAPPA2Q9BXP8 1791 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 IGKV2-40A0A087WW87 121 aaPredicted RBP0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TRBV6-7A0A0A0MS04 114 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TRAV12-3A0A0B4J271 114 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TRBV10-3A0A0K0K1G6 114 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 BBIP1A8MTZ0 92 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 KLF7O75840 302 aaPredicted RBP0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 IGKV2D-40P01614 121 aaPredicted RBP0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 IL5P05113 134 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 IL7P13232 177 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 EFNA4P52798 201 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 CCL8P80075 99 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 HSD52Q0P140 79 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 SPATA45Q537H7 98 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 ZNF818PQ6ZRF7 136 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 C5orf38Q86SI9 138 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TTC9CQ8N5M4 171 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 C10orf105Q8TEF2 133 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TSKUQ8WUA8 353 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 ATG5Q9H1Y0 275 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TMEM14CQ9P0S9 112 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 CEP162Q5TB80 1403 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 SCAPERQ9BY12 1400 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 KMT2AQ03164 3969 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 BTAF1O14981 1849 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 MYO7BQ6PIF6 2116 aa0.43□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 MAP3K4Q9Y6R4 1608 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 PLEKHH2Q8IVE3 1493 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 FLNBO75369 2602 aaKnown RBP0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 LRRC37A2A6NM11 1700 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 DIP2BQ9P265 1576 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 PPIP5K1Q6PFW1 1433 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TRAV30A0A087WSZ9 112 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TRBV7-1A0A0A6YYK4 115 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 LOC101927531A0A1B0GV80 90 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 HIGD1CA8MV81 97 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 SIX6O95475 246 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TFF1P04155 84 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 CBLN1P23435 193 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TPPP2P59282 170 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 MRPS10P82664 201 aaKnown RBP0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 PRB3Q04118 309 aaPredicted RBP0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 KLKP1Q107X0 134 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 COMMD6Q7Z4G1 85 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 ACBD7Q8N6N7 88 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 COPS9Q8WXC6 57 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 SPTSSAQ969W0 71 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 Q96NJ1 140 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 MRPL57Q9BQC6 102 aaKnown RBP0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 SPANXDQ9BXN6 97 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 WFDC10AQ9H1F0 79 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 LINC00474Q9P2X8 69 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 GNG8Q9UK08 70 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 LINC00312Q9Y6C7 94 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 FASNP49327 2511 aaKnown RBP0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 KIAA1109Q2LD37 5005 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 PIEZO2Q9H5I5 2752 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 PDE4DIPQ5VU43 2346 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 ZNF292O60281 2723 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TARBP1Q13395 1621 aaKnown RBP0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 RAPGEF6Q8TEU7 1601 aa0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TNRC18O15417 2968 aaPredicted RBP0.42□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 FANCAO15360 1455 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 POLA1P09884 1462 aaPredicted RBP0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 NLRP1Q9C000 1473 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 PCLOQ9Y6V0 5065 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 MYO9AB2RTY4 2548 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 PI4KAP42356 2102 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 LRRIQ1Q96JM4 1722 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 MAP1BP46821 2468 aaKnown RBP0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TRAV17A0A0B4J275 112 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 C20orf202A1L168 122 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 TMEM262E9PQX1 116 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 APOC4-APOC2K7ER74 178 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 MPC2O95563 127 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 APOC2P02655 101 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 S100A8P05109 93 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 CCKP06307 115 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 PRB4P10163 310 aaPredicted RBP0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 PIPP12273 146 aaPredicted RBP0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 ATP5EP56381 51 aaPredicted RBP0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 FXYD4P59646 89 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 ELOF1P60002 83 aaKnown RBP0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 UBE2G1P62253 170 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 IQCJQ1A5X6 159 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 C9orf153Q5TBE3 101 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 Q5VV11 94 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 MRPL54Q6P161 138 aaKnown RBP0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 LINC00208Q96KT6 92 aa0.41□□□□□ -2.34
NPHP3-ACAD11-202ENST00000632629 AMELXQ99217 191 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms