RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 HIGD2BQ4VC39 106 aa12.53□□□□□ -0.4
TARDBP-228ENST00000629725 KANTRA0A1W2PQU2 76 aa12.52□□□□□ -0.41
TARDBP-228ENST00000629725 GAGE12HA6NDE8 117 aa12.52□□□□□ -0.41
TARDBP-228ENST00000629725 HMSDA8MTL9 139 aa12.52□□□□□ -0.41
TARDBP-228ENST00000629725 H7C1H1 209 aa12.52□□□□□ -0.41
TARDBP-228ENST00000629725 UBE2L6O14933 153 aa12.52□□□□□ -0.41
TARDBP-228ENST00000629725 BCL2L11O43521 198 aa12.51□□□□□ -0.41
TARDBP-228ENST00000629725 MGPP08493 103 aa12.51□□□□□ -0.41
TARDBP-228ENST00000629725 H2AFB1P0C5Y9 115 aa12.51□□□□□ -0.41
TARDBP-228ENST00000629725 SRSF9Q13242 221 aaKnown RBP eCLIP12.51□□□□□ -0.41
TARDBP-228ENST00000629725 TMUB2Q71RG4 321 aa12.51□□□□□ -0.41
TARDBP-228ENST00000629725 A0A096LNI7 61 aa12.5□□□□□ -0.41
TARDBP-228ENST00000629725 NKX2-5P52952 324 aaPredicted RBP12.5□□□□□ -0.41
TARDBP-228ENST00000629725 RPL35P42766 123 aaKnown RBP12.49□□□□□ -0.41
TARDBP-228ENST00000629725 SUMO4Q6EEV6 95 aa12.49□□□□□ -0.41
TARDBP-228ENST00000629725 Q6ZRP5 223 aa12.49□□□□□ -0.41
TARDBP-228ENST00000629725 LINC00474Q9P2X8 69 aa12.49□□□□□ -0.41
TARDBP-228ENST00000629725 MUC2Q02817 5179 aa12.48□□□□□ -0.41
TARDBP-228ENST00000629725 IGKV3OR2-268A0A0C4DH90 116 aa12.48□□□□□ -0.41
TARDBP-228ENST00000629725 EIF5AP63241 154 aaKnown RBP12.48□□□□□ -0.41
TARDBP-228ENST00000629725 PGLYRP4Q96LB8 373 aa12.48□□□□□ -0.41
TARDBP-228ENST00000629725 GVQW2A0A096LPI5 108 aaPredicted RBP12.46□□□□□ -0.41
TARDBP-228ENST00000629725 CCL20P78556 96 aa12.46□□□□□ -0.41
TARDBP-228ENST00000629725 RASL11AQ6T310 242 aa12.46□□□□□ -0.41
TARDBP-228ENST00000629725 MANBALQ9NQG1 85 aa12.46□□□□□ -0.41
TARDBP-228ENST00000629725 GNG13Q9P2W3 67 aa12.46□□□□□ -0.41
TARDBP-228ENST00000629725 AMTP48728 403 aa12.45□□□□□ -0.42
TARDBP-228ENST00000629725 C11orf52Q96A22 123 aa12.45□□□□□ -0.42
TARDBP-228ENST00000629725 TPPP3Q9BW30 176 aa12.45□□□□□ -0.42
TARDBP-228ENST00000629725 COTL1Q14019 142 aa12.44□□□□□ -0.42
TARDBP-228ENST00000629725 CENPWQ5EE01 88 aa12.44□□□□□ -0.42
TARDBP-228ENST00000629725 CHCHD10Q8WYQ3 142 aaPredicted RBP12.44□□□□□ -0.42
TARDBP-228ENST00000629725 PKIGQ9Y2B9 76 aa12.44□□□□□ -0.42
TARDBP-228ENST00000629725 NIT2Q9NQR4 276 aa12.43□□□□□ -0.42
TARDBP-228ENST00000629725 FAM231BA6NCW3 169 aa12.42□□□□□ -0.42
TARDBP-228ENST00000629725 FER1L6-AS1Q8NA97 138 aa12.42□□□□□ -0.42
TARDBP-228ENST00000629725 OR2D3Q8NGH3 330 aa12.42□□□□□ -0.42
TARDBP-228ENST00000629725 TRAV1-1A0A0B4J248 108 aa12.41□□□□□ -0.42
TARDBP-228ENST00000629725 IGLC6P0CF74 106 aa12.41□□□□□ -0.42
TARDBP-228ENST00000629725 RPS20P60866 119 aaKnown RBP12.4□□□□□ -0.42
TARDBP-228ENST00000629725 RAB19A4D1S5 217 aa12.39□□□□□ -0.43
TARDBP-228ENST00000629725 C19orf71A6NCJ1 209 aa12.39□□□□□ -0.43
TARDBP-228ENST00000629725 GNG4P50150 75 aa12.39□□□□□ -0.43
TARDBP-228ENST00000629725 CACNG7P62955 275 aa12.39□□□□□ -0.43
TARDBP-228ENST00000629725 AMMECR1LQ6DCA0 310 aa12.39□□□□□ -0.43
TARDBP-228ENST00000629725 TEX46H3BTG2 121 aa12.38□□□□□ -0.43
TARDBP-228ENST00000629725 FOXI1Q12951 378 aa12.38□□□□□ -0.43
TARDBP-228ENST00000629725 TRGC1P0CF51 173 aa12.37□□□□□ -0.43
TARDBP-228ENST00000629725 MEF2BQ02080 365 aaPredicted RBP12.37□□□□□ -0.43
TARDBP-228ENST00000629725 EIF5AL1Q6IS14 154 aaKnown RBP12.37□□□□□ -0.43
TARDBP-228ENST00000629725 SMIM12Q96EX1 92 aa12.37□□□□□ -0.43
TARDBP-228ENST00000629725 CARD19Q96LW7 228 aa12.37□□□□□ -0.43
TARDBP-228ENST00000629725 KRTAP9-2Q9BYQ4 174 aa12.37□□□□□ -0.43
TARDBP-228ENST00000629725 XKRY2A2RUG3 117 aa12.36□□□□□ -0.43
TARDBP-228ENST00000629725 RNASEKQ6P5S7 137 aaKnown RBP12.36□□□□□ -0.43
TARDBP-228ENST00000629725 ZNF664Q8N3J9 261 aa12.36□□□□□ -0.43
TARDBP-228ENST00000629725 LINC00526Q96FQ7 95 aa12.36□□□□□ -0.43
TARDBP-228ENST00000629725 TRBV20OR9-2A0A075B6H5 130 aa12.35□□□□□ -0.43
TARDBP-228ENST00000629725 F2Z2F3 143 aa12.35□□□□□ -0.43
TARDBP-228ENST00000629725 PDE6DO43924 150 aa12.35□□□□□ -0.43
TARDBP-228ENST00000629725 LYZL1Q6UWQ5 148 aa12.35□□□□□ -0.43
TARDBP-228ENST00000629725 MED9Q9NWA0 146 aa12.35□□□□□ -0.43
TARDBP-228ENST00000629725 IFNA1P01562 189 aa12.34□□□□□ -0.43
TARDBP-228ENST00000629725 NTF3P20783 257 aa12.34□□□□□ -0.43
TARDBP-228ENST00000629725 XCL1P47992 114 aa12.34□□□□□ -0.43
TARDBP-228ENST00000629725 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.33□□□□□ -0.44
TARDBP-228ENST00000629725 IGHV1-58A0A0C4DH39 117 aa12.33□□□□□ -0.44
TARDBP-228ENST00000629725 IGKV2-29A2NJV5 120 aaPredicted RBP12.33□□□□□ -0.44
TARDBP-228ENST00000629725 PTTG1IPP53801 180 aa12.33□□□□□ -0.44
TARDBP-228ENST00000629725 BIN3Q9NQY0 253 aa12.33□□□□□ -0.44
TARDBP-228ENST00000629725 PSORS1C2Q9UIG4 136 aa12.33□□□□□ -0.44
TARDBP-228ENST00000629725 H7C423 109 aa12.32□□□□□ -0.44
TARDBP-228ENST00000629725 BCL2P10415 239 aa12.32□□□□□ -0.44
TARDBP-228ENST00000629725 Q6ZNX1 250 aa12.32□□□□□ -0.44
TARDBP-228ENST00000629725 OR5A1Q8NGJ0 315 aa12.32□□□□□ -0.44
TARDBP-228ENST00000629725 ZNF561-AS1K7EIQ3 104 aa12.31□□□□□ -0.44
TARDBP-228ENST00000629725 FGF6P10767 208 aa12.31□□□□□ -0.44
TARDBP-228ENST00000629725 SYCNQ0VAF6 134 aa12.31□□□□□ -0.44
TARDBP-228ENST00000629725 TRAV26-2A0A0B4J265 109 aa12.3□□□□□ -0.44
TARDBP-228ENST00000629725 CCL25O15444 150 aa12.3□□□□□ -0.44
TARDBP-228ENST00000629725 NCR2O95944 276 aa12.3□□□□□ -0.44
TARDBP-228ENST00000629725 MT-ND6P03923 174 aa12.3□□□□□ -0.44
TARDBP-228ENST00000629725 CTRLP40313 264 aa12.3□□□□□ -0.44
TARDBP-228ENST00000629725 GAGE2BQ13066 116 aa12.3□□□□□ -0.44
TARDBP-228ENST00000629725 C9orf62Q8N4C0 152 aa12.3□□□□□ -0.44
TARDBP-228ENST00000629725 GATD1Q8NB37 220 aa12.3□□□□□ -0.44
TARDBP-228ENST00000629725 NUDT10Q8NFP7 164 aa12.3□□□□□ -0.44
TARDBP-228ENST00000629725 NUDT11Q96G61 164 aa12.3□□□□□ -0.44
TARDBP-228ENST00000629725 APCSP02743 223 aa12.29□□□□□ -0.44
TARDBP-228ENST00000629725 LOC107984640A0A0U1RRK4 108 aa12.28□□□□□ -0.44
TARDBP-228ENST00000629725 LINC00959A0A1B0GUT2 108 aa12.28□□□□□ -0.44
TARDBP-228ENST00000629725 A0A1W2PNN7 141 aa12.28□□□□□ -0.44
TARDBP-228ENST00000629725 ZNF25P17030 456 aaPredicted RBP12.28□□□□□ -0.44
TARDBP-228ENST00000629725 TWIST1Q15672 202 aa12.28□□□□□ -0.44
TARDBP-228ENST00000629725 PRR26Q8N8Z3 221 aa12.28□□□□□ -0.44
TARDBP-228ENST00000629725 A0A0U1RQV1 116 aa12.27□□□□□ -0.45
TARDBP-228ENST00000629725 C1orf137Q5JT78 98 aa12.27□□□□□ -0.45
TARDBP-228ENST00000629725 TMEM101Q96IK0 257 aa12.27□□□□□ -0.45
TARDBP-228ENST00000629725 BTF3L4Q96K17 158 aa12.27□□□□□ -0.45
TARDBP-228ENST00000629725 RNASE7Q9H1E1 156 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms