RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 PRO0628Q9UI54 55 aa13.12□□□□□ -0.31
TRA2A-212ENST00000621813 A0A0J9YY99 117 aa13.11□□□□□ -0.31
TRA2A-212ENST00000621813 IGHV3-33P01772 117 aa13.11□□□□□ -0.31
TRA2A-212ENST00000621813 KRTAP10-9P60411 292 aa13.11□□□□□ -0.31
TRA2A-212ENST00000621813 PAPPA-AS1Q5QFB9 102 aa13.11□□□□□ -0.31
TRA2A-212ENST00000621813 C2orf82Q6UX34 121 aa13.11□□□□□ -0.31
TRA2A-212ENST00000621813 APRG1Q8IVJ8 170 aa13.11□□□□□ -0.31
TRA2A-212ENST00000621813 PRRC2AP48634 2157 aaKnown RBP13.11□□□□□ -0.31
TRA2A-212ENST00000621813 LINC00643Q86TS7 51 aa13.11□□□□□ -0.31
TRA2A-212ENST00000621813 PLEKHB2Q96CS7 222 aa13.11□□□□□ -0.31
TRA2A-212ENST00000621813 ATOX1O00244 68 aa13.1□□□□□ -0.31
TRA2A-212ENST00000621813 PRR9Q5T870 116 aa13.1□□□□□ -0.31
TRA2A-212ENST00000621813 SLC25A29Q8N8R3 303 aa13.1□□□□□ -0.31
TRA2A-212ENST00000621813 MED14OSP0DP75 135 aa13.09□□□□□ -0.31
TRA2A-212ENST00000621813 SPANXN1Q5VSR9 72 aa13.09□□□□□ -0.31
TRA2A-212ENST00000621813 CSPG4Q6UVK1 2322 aa13.09□□□□□ -0.31
TRA2A-212ENST00000621813 FBN2P35556 2912 aa13.09□□□□□ -0.31
TRA2A-212ENST00000621813 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.09□□□□□ -0.31
TRA2A-212ENST00000621813 DCANP1Q8TF63 244 aa13.09□□□□□ -0.31
TRA2A-212ENST00000621813 ZNF702PQ9H963 129 aa13.09□□□□□ -0.31
TRA2A-212ENST00000621813 KLK5Q9Y337 293 aaPredicted RBP13.09□□□□□ -0.31
TRA2A-212ENST00000621813 TRBV30A0A0K0K1B3 111 aa13.08□□□□□ -0.32
TRA2A-212ENST00000621813 NEXN-AS1Q8NBZ9 246 aa13.08□□□□□ -0.32
TRA2A-212ENST00000621813 IGKV3-7A0A075B6H7 116 aa13.07□□□□□ -0.32
TRA2A-212ENST00000621813 RNF152Q8N8N0 203 aa13.07□□□□□ -0.32
TRA2A-212ENST00000621813 UBE2E2Q96LR5 201 aa13.07□□□□□ -0.32
TRA2A-212ENST00000621813 Q96MF0 132 aa13.07□□□□□ -0.32
TRA2A-212ENST00000621813 ORMDL2Q53FV1 153 aa13.07□□□□□ -0.32
TRA2A-212ENST00000621813 C10orf99Q6UWK7 81 aa13.07□□□□□ -0.32
TRA2A-212ENST00000621813 TMEM263Q8WUH6 116 aaKnown RBP13.07□□□□□ -0.32
TRA2A-212ENST00000621813 CSMD2Q7Z408 3487 aa13.05□□□□□ -0.32
TRA2A-212ENST00000621813 S100A4P26447 101 aaKnown RBP13.05□□□□□ -0.32
TRA2A-212ENST00000621813 Q5XG85 94 aa13.05□□□□□ -0.32
TRA2A-212ENST00000621813 C2orf48Q96LS8 159 aa13.05□□□□□ -0.32
TRA2A-212ENST00000621813 LRRK2Q5S007 2527 aa13.05□□□□□ -0.32
TRA2A-212ENST00000621813 MAP1AP78559 2803 aaPredicted RBP13.05□□□□□ -0.32
TRA2A-212ENST00000621813 F6UB75 175 aa13.05□□□□□ -0.32
TRA2A-212ENST00000621813 HRCT1Q6UXD1 115 aa13.05□□□□□ -0.32
TRA2A-212ENST00000621813 SCGB3A1Q96QR1 104 aa13.05□□□□□ -0.32
TRA2A-212ENST00000621813 KLLNB2CW77 178 aa13.04□□□□□ -0.32
TRA2A-212ENST00000621813 RNASE4P34096 147 aaKnown RBP13.04□□□□□ -0.32
TRA2A-212ENST00000621813 SNRPD3P62318 126 aaKnown RBP13.04□□□□□ -0.32
TRA2A-212ENST00000621813 C4orf26Q17RF5 130 aa13.04□□□□□ -0.32
TRA2A-212ENST00000621813 Q8N2B8 174 aa13.04□□□□□ -0.32
TRA2A-212ENST00000621813 TOMM6Q96B49 74 aa13.04□□□□□ -0.32
TRA2A-212ENST00000621813 C5orf38Q86SI9 138 aa13.03□□□□□ -0.32
TRA2A-212ENST00000621813 EDN2P20800 178 aa13.03□□□□□ -0.32
TRA2A-212ENST00000621813 DEFB1P60022 68 aa13.03□□□□□ -0.32
TRA2A-212ENST00000621813 PHLDA3Q9Y5J5 127 aa13.03□□□□□ -0.32
TRA2A-212ENST00000621813 CEMP1Q6PRD7 247 aaPredicted RBP13.02□□□□□ -0.32
TRA2A-212ENST00000621813 KRTAP1-3Q8IUG1 177 aa13.02□□□□□ -0.32
TRA2A-212ENST00000621813 JPT2Q9H910 190 aa13.02□□□□□ -0.32
TRA2A-212ENST00000621813 Q1RN00 199 aa13.01□□□□□ -0.33
TRA2A-212ENST00000621813 NRACQ8N912 160 aa13.01□□□□□ -0.33
TRA2A-212ENST00000621813 USP9YO00507 2555 aaPredicted RBP13.01□□□□□ -0.33
TRA2A-212ENST00000621813 IGHV4OR15-8A0A075B7B6 117 aa13.01□□□□□ -0.33
TRA2A-212ENST00000621813 A0A087WW49 117 aa13.01□□□□□ -0.33
TRA2A-212ENST00000621813 H7C423 109 aa13.01□□□□□ -0.33
TRA2A-212ENST00000621813 GAS8-AS1O95177 125 aa13.01□□□□□ -0.33
TRA2A-212ENST00000621813 COX6CP09669 75 aa13.01□□□□□ -0.33
TRA2A-212ENST00000621813 SYNJ2BPP57105 145 aa13.01□□□□□ -0.33
TRA2A-212ENST00000621813 HIST1H4AP62805 103 aaKnown RBP13.01□□□□□ -0.33
TRA2A-212ENST00000621813 DPH3P1Q9H4G8 78 aa13.01□□□□□ -0.33
TRA2A-212ENST00000621813 K7EQG2 157 aa13□□□□□ -0.33
TRA2A-212ENST00000621813 HOXD3P31249 432 aaPredicted RBP13□□□□□ -0.33
TRA2A-212ENST00000621813 TMEM86BQ8N661 226 aa13□□□□□ -0.33
TRA2A-212ENST00000621813 M0R381 172 aa13□□□□□ -0.33
TRA2A-212ENST00000621813 GATA1P15976 413 aaPredicted RBP13□□□□□ -0.33
TRA2A-212ENST00000621813 TINCRA0A1B0GVN0 87 aa12.99□□□□□ -0.33
TRA2A-212ENST00000621813 SDIM1Q6ZPB5 146 aa12.99□□□□□ -0.33
TRA2A-212ENST00000621813 SEC61GP60059 68 aa12.98□□□□□ -0.33
TRA2A-212ENST00000621813 TENM4Q6N022 2769 aa12.98□□□□□ -0.33
TRA2A-212ENST00000621813 TRAV13-1A0A0B4J241 112 aa12.98□□□□□ -0.33
TRA2A-212ENST00000621813 A0A0J9YX75 114 aa12.98□□□□□ -0.33
TRA2A-212ENST00000621813 hADV29S1A0JD25 119 aa12.98□□□□□ -0.33
TRA2A-212ENST00000621813 NDUFC2-KCTD14E9PQ53 114 aa12.98□□□□□ -0.33
TRA2A-212ENST00000621813 NXPH4O95158 308 aa12.98□□□□□ -0.33
TRA2A-212ENST00000621813 RNASE3P12724 160 aaKnown RBP12.98□□□□□ -0.33
TRA2A-212ENST00000621813 SMIM2Q9BVW6 85 aa12.98□□□□□ -0.33
TRA2A-212ENST00000621813 POLQO75417 2590 aa12.97□□□□□ -0.33
TRA2A-212ENST00000621813 PTPN13Q12923 2485 aa12.97□□□□□ -0.33
TRA2A-212ENST00000621813 PPP1R17O96001 155 aa12.97□□□□□ -0.33
TRA2A-212ENST00000621813 TRAV26-2A0A0B4J265 109 aa12.96□□□□□ -0.33
TRA2A-212ENST00000621813 RS1O15537 224 aa12.96□□□□□ -0.33
TRA2A-212ENST00000621813 GNRH2O43555 120 aa12.96□□□□□ -0.33
TRA2A-212ENST00000621813 PYGO1Q9Y3Y4 419 aa12.96□□□□□ -0.33
TRA2A-212ENST00000621813 KLHL30-AS1Q8NEE0 82 aa12.96□□□□□ -0.34
TRA2A-212ENST00000621813 NAV2Q8IVL1 2488 aa12.95□□□□□ -0.34
TRA2A-212ENST00000621813 PEMTQ9UBM1 199 aa12.95□□□□□ -0.34
TRA2A-212ENST00000621813 ZANQ9Y493 2812 aa12.95□□□□□ -0.34
TRA2A-212ENST00000621813 C11orf86A6NJI1 115 aa12.94□□□□□ -0.34
TRA2A-212ENST00000621813 ZNF22P17026 224 aaPredicted RBP12.94□□□□□ -0.34
TRA2A-212ENST00000621813 C14orf178Q8N769 122 aaPredicted RBP12.94□□□□□ -0.34
TRA2A-212ENST00000621813 TRIAP1O43715 76 aa12.94□□□□□ -0.34
TRA2A-212ENST00000621813 C4orf3Q8WVX3 66 aa12.94□□□□□ -0.34
TRA2A-212ENST00000621813 CENPEQ02224 2701 aa12.94□□□□□ -0.34
TRA2A-212ENST00000621813 TRAV12-3A0A0B4J271 114 aa12.93□□□□□ -0.34
TRA2A-212ENST00000621813 SUMO2P61956 95 aaKnown RBP12.93□□□□□ -0.34
TRA2A-212ENST00000621813 C1orf43Q9BWL3 253 aa12.93□□□□□ -0.34
TRA2A-212ENST00000621813 TMEM223A0PJW6 202 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 358 ms