RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 STHQ8IWL8 128 aa6.93□□□□□ -1.3
GGA3-222ENST00000621217 RPL39LQ96EH5 51 aaKnown RBP6.93□□□□□ -1.3
GGA3-222ENST00000621217 TM2D2Q9BX73 214 aa6.93□□□□□ -1.3
GGA3-222ENST00000621217 A0A1B0GX51 115 aa6.92□□□□□ -1.3
GGA3-222ENST00000621217 HTN3P15516 51 aa6.92□□□□□ -1.3
GGA3-222ENST00000621217 SMG1Q96Q15 3661 aaKnown RBP6.92□□□□□ -1.3
GGA3-222ENST00000621217 A4D1N5 150 aa6.92□□□□□ -1.3
GGA3-222ENST00000621217 ODF1Q14990 250 aa6.92□□□□□ -1.3
GGA3-222ENST00000621217 DCHS2Q6V1P9 2916 aa6.92□□□□□ -1.3
GGA3-222ENST00000621217 COL27A1Q8IZC6 1860 aaPredicted RBP6.92□□□□□ -1.3
GGA3-222ENST00000621217 FSTL3O95633 263 aa6.92□□□□□ -1.3
GGA3-222ENST00000621217 ATP5G1P05496 136 aa6.92□□□□□ -1.3
GGA3-222ENST00000621217 ITPR2Q14571 2701 aa6.92□□□□□ -1.3
GGA3-222ENST00000621217 TRBV10-2A0A0K0K1G8 114 aa6.91□□□□□ -1.3
GGA3-222ENST00000621217 RS1O15537 224 aa6.91□□□□□ -1.3
GGA3-222ENST00000621217 NDUFC2O95298 119 aa6.91□□□□□ -1.3
GGA3-222ENST00000621217 TRGV11A0A075B6L2 103 aa6.91□□□□□ -1.3
GGA3-222ENST00000621217 H3BT86 120 aa6.91□□□□□ -1.3
GGA3-222ENST00000621217 LAMTOR3Q9UHA4 124 aa6.91□□□□□ -1.3
GGA3-222ENST00000621217 A0A0B4J2C4 111 aa6.91□□□□□ -1.3
GGA3-222ENST00000621217 NDUFA4O00483 81 aa6.91□□□□□ -1.3
GGA3-222ENST00000621217 APRG1Q8IVJ8 170 aa6.91□□□□□ -1.3
GGA3-222ENST00000621217 Q8N976 141 aa6.91□□□□□ -1.3
GGA3-222ENST00000621217 URB1-AS1Q96HZ7 61 aa6.91□□□□□ -1.3
GGA3-222ENST00000621217 JPT2Q9H910 190 aa6.91□□□□□ -1.3
GGA3-222ENST00000621217 IGHV4OR15-8A0A075B7B6 117 aa6.9□□□□□ -1.3
GGA3-222ENST00000621217 A0A087WW49 117 aa6.9□□□□□ -1.3
GGA3-222ENST00000621217 TRBV6-1A0A0K0K1D8 114 aa6.9□□□□□ -1.3
GGA3-222ENST00000621217 UQCRQO14949 82 aa6.9□□□□□ -1.3
GGA3-222ENST00000621217 IGHV4-31P0DP07 118 aa6.9□□□□□ -1.3
GGA3-222ENST00000621217 SDHAF1A6NFY7 115 aa6.9□□□□□ -1.3
GGA3-222ENST00000621217 IGHG2P01859 326 aa6.9□□□□□ -1.3
GGA3-222ENST00000621217 IGHV7-4-1A0A0J9YVY3 117 aa6.9□□□□□ -1.31
GGA3-222ENST00000621217 J3QLI3 93 aa6.9□□□□□ -1.31
GGA3-222ENST00000621217 BAALC-AS2P0C853 105 aa6.9□□□□□ -1.31
GGA3-222ENST00000621217 UFSP1Q6NVU6 142 aa6.9□□□□□ -1.31
GGA3-222ENST00000621217 TMEM243Q9BU79 118 aa6.9□□□□□ -1.31
GGA3-222ENST00000621217 IGHV3-16A0A0C4DH30 117 aa6.9□□□□□ -1.31
GGA3-222ENST00000621217 DUSP14O95147 198 aaKnown RBP6.9□□□□□ -1.31
GGA3-222ENST00000621217 C2orf91Q6ZV80 131 aa6.9□□□□□ -1.31
GGA3-222ENST00000621217 A6NDX4 124 aa6.89□□□□□ -1.31
GGA3-222ENST00000621217 EDN2P20800 178 aa6.89□□□□□ -1.31
GGA3-222ENST00000621217 CFHR3Q02985 330 aa6.89□□□□□ -1.31
GGA3-222ENST00000621217 Q8N1Y9 231 aa6.89□□□□□ -1.31
GGA3-222ENST00000621217 TRGV2A0A075B6R0 118 aa6.89□□□□□ -1.31
GGA3-222ENST00000621217 TRPT1Q86TN4 253 aaKnown RBP6.89□□□□□ -1.31
GGA3-222ENST00000621217 PIFOQ8TCI5 191 aa6.89□□□□□ -1.31
GGA3-222ENST00000621217 TRAV12-1A0A0B4J245 112 aa6.89□□□□□ -1.31
GGA3-222ENST00000621217 F8W735 103 aaPredicted RBP6.89□□□□□ -1.31
GGA3-222ENST00000621217 TCL1BO95988 128 aa6.89□□□□□ -1.31
GGA3-222ENST00000621217 RNASE13Q5GAN3 156 aaKnown RBP6.89□□□□□ -1.31
GGA3-222ENST00000621217 LINC00643Q86TS7 51 aa6.89□□□□□ -1.31
GGA3-222ENST00000621217 PHLDA1Q8WV24 401 aaPredicted RBP6.89□□□□□ -1.31
GGA3-222ENST00000621217 C20orf173Q96LM9 149 aa6.88□□□□□ -1.31
GGA3-222ENST00000621217 CHCHD5Q9BSY4 110 aa6.88□□□□□ -1.31
GGA3-222ENST00000621217 C11orf21Q9P2W6 132 aa6.88□□□□□ -1.31
GGA3-222ENST00000621217 ADARB2-AS1A8MUL3 147 aa6.88□□□□□ -1.31
GGA3-222ENST00000621217 LINC01619G3V211 115 aa6.88□□□□□ -1.31
GGA3-222ENST00000621217 ZFAND3Q9H8U3 227 aa6.88□□□□□ -1.31
GGA3-222ENST00000621217 XGP55808 180 aa6.88□□□□□ -1.31
GGA3-222ENST00000621217 HAMPP81172 84 aa6.88□□□□□ -1.31
GGA3-222ENST00000621217 C18orf65Q6ZTR6 163 aa6.88□□□□□ -1.31
GGA3-222ENST00000621217 NDUFA11Q86Y39 141 aa6.87□□□□□ -1.31
GGA3-222ENST00000621217 MUSTN1Q8IVN3 82 aa6.87□□□□□ -1.31
GGA3-222ENST00000621217 IGHV3-38A0A0C4DH36 116 aa6.87□□□□□ -1.31
GGA3-222ENST00000621217 ICOSQ9Y6W8 199 aa6.87□□□□□ -1.31
GGA3-222ENST00000621217 UNC79Q9P2D8 2635 aa6.87□□□□□ -1.31
GGA3-222ENST00000621217 TRGV1A0A0A0MS02 117 aa6.87□□□□□ -1.31
GGA3-222ENST00000621217 CCDC179H3BU77 68 aa6.86□□□□□ -1.31
GGA3-222ENST00000621217 Q8N6K4 173 aa6.86□□□□□ -1.31
GGA3-222ENST00000621217 UBR5O95071 2799 aaPredicted RBP6.86□□□□□ -1.31
GGA3-222ENST00000621217 ELANEP08246 267 aa6.86□□□□□ -1.31
GGA3-222ENST00000621217 HERVK_113P63121 156 aa6.86□□□□□ -1.31
GGA3-222ENST00000621217 PRR9Q5T870 116 aa6.86□□□□□ -1.31
GGA3-222ENST00000621217 ZFP2Q6ZN57 461 aa6.86□□□□□ -1.31
GGA3-222ENST00000621217 I3L3M4 83 aa6.86□□□□□ -1.31
GGA3-222ENST00000621217 C3orf22Q8N5N4 141 aa6.86□□□□□ -1.31
GGA3-222ENST00000621217 IGKV3D-7A0A0C4DH55 119 aa6.85□□□□□ -1.31
GGA3-222ENST00000621217 TINCRA0A1B0GVN0 87 aa6.85□□□□□ -1.31
GGA3-222ENST00000621217 DNAJC9-AS1A6NH13 148 aa6.85□□□□□ -1.31
GGA3-222ENST00000621217 M0QXV9 152 aa6.85□□□□□ -1.31
GGA3-222ENST00000621217 MRPS12O15235 138 aaKnown RBP6.85□□□□□ -1.31
GGA3-222ENST00000621217 EBI3Q14213 229 aa6.85□□□□□ -1.31
GGA3-222ENST00000621217 CELSR2Q9HCU4 2923 aa6.85□□□□□ -1.31
GGA3-222ENST00000621217 TRAV13-2A0A0B4J235 113 aa6.85□□□□□ -1.31
GGA3-222ENST00000621217 CCL24O00175 119 aa6.85□□□□□ -1.31
GGA3-222ENST00000621217 PRM2P04554 102 aa6.85□□□□□ -1.31
GGA3-222ENST00000621217 DEFB130BP0DP73 79 aa6.85□□□□□ -1.31
GGA3-222ENST00000621217 DEFB130AP0DP74 79 aa6.85□□□□□ -1.31
GGA3-222ENST00000621217 RPL39P62891 51 aaKnown RBP6.85□□□□□ -1.31
GGA3-222ENST00000621217 RHODO00212 210 aa6.85□□□□□ -1.31
GGA3-222ENST00000621217 INSL3P51460 131 aa6.85□□□□□ -1.31
GGA3-222ENST00000621217 FAM110AQ9BQ89 295 aa6.85□□□□□ -1.31
GGA3-222ENST00000621217 INAFM1C9JVW0 142 aa6.84□□□□□ -1.31
GGA3-222ENST00000621217 TMEM61Q8N0U2 210 aa6.84□□□□□ -1.31
GGA3-222ENST00000621217 CLPSL1A2RUU4 121 aa6.84□□□□□ -1.31
GGA3-222ENST00000621217 PLA2G2AP14555 144 aa6.84□□□□□ -1.31
GGA3-222ENST00000621217 IGLC6P0CF74 106 aa6.84□□□□□ -1.31
GGA3-222ENST00000621217 MDFICQ9P1T7 246 aa6.84□□□□□ -1.31
GGA3-222ENST00000621217 NDUFA7O95182 113 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms