RNA–Protein interactions for RNA: ENST00000621013.4

SLC39A1-211, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLC39A1, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-211ENST00000621013 RBMY1EA6NEQ0 496 aaKnown RBP12.73□□□□□ -0.37
SLC39A1-211ENST00000621013 RBMY1DP0C7P1 496 aaKnown RBP12.73□□□□□ -0.37
SLC39A1-211ENST00000621013 HTN1P15515 57 aa12.73□□□□□ -0.37
SLC39A1-211ENST00000621013 LINC01620Q4KN68 170 aa12.73□□□□□ -0.37
SLC39A1-211ENST00000621013 DUX3Q96PT4 197 aa12.73□□□□□ -0.37
SLC39A1-211ENST00000621013 NDUFA12Q9UI09 145 aa12.73□□□□□ -0.37
SLC39A1-211ENST00000621013 ADARB2-AS1A8MUL3 147 aa12.72□□□□□ -0.37
SLC39A1-211ENST00000621013 Q6YL49 198 aa12.72□□□□□ -0.37
SLC39A1-211ENST00000621013 RNF183Q96D59 192 aa12.72□□□□□ -0.37
SLC39A1-211ENST00000621013 LINC00467Q9BRT7 94 aa12.72□□□□□ -0.37
SLC39A1-211ENST00000621013 MIAQ16674 131 aa12.72□□□□□ -0.37
SLC39A1-211ENST00000621013 TRIAP1O43715 76 aa12.71□□□□□ -0.37
SLC39A1-211ENST00000621013 FSHBP01225 129 aa12.71□□□□□ -0.37
SLC39A1-211ENST00000621013 Q6ZSN1 163 aa12.71□□□□□ -0.37
SLC39A1-211ENST00000621013 DNAJC30Q96LL9 226 aa12.71□□□□□ -0.37
SLC39A1-211ENST00000621013 GEMIN7Q9H840 131 aaKnown RBP12.71□□□□□ -0.37
SLC39A1-211ENST00000621013 ADAMTSL4-AS1Q5T5F5 129 aa12.71□□□□□ -0.38
SLC39A1-211ENST00000621013 TRBV10-2A0A0K0K1G8 114 aa12.7□□□□□ -0.38
SLC39A1-211ENST00000621013 SLURP1P55000 103 aa12.7□□□□□ -0.38
SLC39A1-211ENST00000621013 RNASE13Q5GAN3 156 aaKnown RBP12.7□□□□□ -0.38
SLC39A1-211ENST00000621013 ZFAND6Q6FIF0 208 aa12.7□□□□□ -0.38
SLC39A1-211ENST00000621013 NRGNQ92686 78 aa12.7□□□□□ -0.38
SLC39A1-211ENST00000621013 Q9UF83 564 aa12.7□□□□□ -0.38
SLC39A1-211ENST00000621013 TIMM17BO60830 172 aa12.69□□□□□ -0.38
SLC39A1-211ENST00000621013 IGHV3-53P01767 116 aa12.69□□□□□ -0.38
SLC39A1-211ENST00000621013 PRSS2P07478 247 aa12.69□□□□□ -0.38
SLC39A1-211ENST00000621013 RPL13AP40429 203 aaKnown RBP12.69□□□□□ -0.38
SLC39A1-211ENST00000621013 BEAN1Q3B7T3 259 aa12.68□□□□□ -0.38
SLC39A1-211ENST00000621013 C11orf72Q8NBR9 251 aa12.68□□□□□ -0.38
SLC39A1-211ENST00000621013 ICOSQ9Y6W8 199 aa12.68□□□□□ -0.38
SLC39A1-211ENST00000621013 PKD1L2Q7Z442 2459 aa12.68□□□□□ -0.38
SLC39A1-211ENST00000621013 YAE1D1Q9NRH1 226 aa12.68□□□□□ -0.38
SLC39A1-211ENST00000621013 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.67□□□□□ -0.38
SLC39A1-211ENST00000621013 IGKV2-29A2NJV5 120 aaPredicted RBP12.67□□□□□ -0.38
SLC39A1-211ENST00000621013 PRM2P04554 102 aa12.67□□□□□ -0.38
SLC39A1-211ENST00000621013 NTN5Q8WTR8 489 aaPredicted RBP12.67□□□□□ -0.38
SLC39A1-211ENST00000621013 IGLV5-45A0A087WSX0 123 aa12.67□□□□□ -0.38
SLC39A1-211ENST00000621013 PEMTQ9UBM1 199 aa12.67□□□□□ -0.38
SLC39A1-211ENST00000621013 CSPG4Q6UVK1 2322 aa12.66□□□□□ -0.38
SLC39A1-211ENST00000621013 IFITM1P13164 125 aa12.66□□□□□ -0.38
SLC39A1-211ENST00000621013 TIRAPP58753 221 aa12.66□□□□□ -0.38
SLC39A1-211ENST00000621013 DEFB136Q30KP8 78 aa12.66□□□□□ -0.38
SLC39A1-211ENST00000621013 TMEM61Q8N0U2 210 aa12.66□□□□□ -0.38
SLC39A1-211ENST00000621013 CITED1Q99966 193 aa12.66□□□□□ -0.38
SLC39A1-211ENST00000621013 BEX4Q9NWD9 120 aaPredicted RBP12.66□□□□□ -0.38
SLC39A1-211ENST00000621013 NACAE9PAV3 2078 aa12.66□□□□□ -0.38
SLC39A1-211ENST00000621013 RS1O15537 224 aa12.66□□□□□ -0.38
SLC39A1-211ENST00000621013 C18orf65Q6ZTR6 163 aa12.66□□□□□ -0.38
SLC39A1-211ENST00000621013 MAP6D1Q9H9H5 199 aa12.66□□□□□ -0.38
SLC39A1-211ENST00000621013 ACACBO00763 2458 aa12.66□□□□□ -0.38
SLC39A1-211ENST00000621013 Q8N2B8 174 aa12.65□□□□□ -0.38
SLC39A1-211ENST00000621013 A8MZ25 164 aa12.65□□□□□ -0.39
SLC39A1-211ENST00000621013 COX6CP09669 75 aa12.65□□□□□ -0.39
SLC39A1-211ENST00000621013 LINC01587Q99440 93 aa12.65□□□□□ -0.39
SLC39A1-211ENST00000621013 COL12A1Q99715 3063 aa12.64□□□□□ -0.39
SLC39A1-211ENST00000621013 PRRC2AP48634 2157 aaKnown RBP12.64□□□□□ -0.39
SLC39A1-211ENST00000621013 NDUFA1O15239 70 aa12.63□□□□□ -0.39
SLC39A1-211ENST00000621013 INSP01308 110 aa12.63□□□□□ -0.39
SLC39A1-211ENST00000621013 MAPK1IP1LQ8NDC0 245 aa12.63□□□□□ -0.39
SLC39A1-211ENST00000621013 SPG11Q96JI7 2443 aa12.63□□□□□ -0.39
SLC39A1-211ENST00000621013 SORL1Q92673 2214 aa12.63□□□□□ -0.39
SLC39A1-211ENST00000621013 H3BT86 120 aa12.62□□□□□ -0.39
SLC39A1-211ENST00000621013 C4orf3Q8WVX3 66 aa12.62□□□□□ -0.39
SLC39A1-211ENST00000621013 CDKN2A-AS1Q9UH64 79 aa12.62□□□□□ -0.39
SLC39A1-211ENST00000621013 DOPEY1Q5JWR5 2465 aa12.62□□□□□ -0.39
SLC39A1-211ENST00000621013 TRAV26-1A0A087WT03 109 aa12.62□□□□□ -0.39
SLC39A1-211ENST00000621013 IGHV3-38A0A0C4DH36 116 aa12.62□□□□□ -0.39
SLC39A1-211ENST00000621013 UBE2WQ96B02 151 aa12.62□□□□□ -0.39
SLC39A1-211ENST00000621013 TEX49A0A1B0GTD5 131 aa12.61□□□□□ -0.39
SLC39A1-211ENST00000621013 H7C423 109 aa12.61□□□□□ -0.39
SLC39A1-211ENST00000621013 TEX29Q8N6K0 151 aa12.61□□□□□ -0.39
SLC39A1-211ENST00000621013 CLUHP3Q96NS8 147 aa12.61□□□□□ -0.39
SLC39A1-211ENST00000621013 IGHV4-31P0DP07 118 aa12.61□□□□□ -0.39
SLC39A1-211ENST00000621013 C2orf82Q6UX34 121 aa12.61□□□□□ -0.39
SLC39A1-211ENST00000621013 TMEM101Q96IK0 257 aa12.61□□□□□ -0.39
SLC39A1-211ENST00000621013 LST1O00453 97 aa12.6□□□□□ -0.39
SLC39A1-211ENST00000621013 NPC2P61916 151 aa12.6□□□□□ -0.39
SLC39A1-211ENST00000621013 DEFB114Q30KQ6 69 aa12.6□□□□□ -0.39
SLC39A1-211ENST00000621013 FAM19A3Q7Z5A8 133 aa12.6□□□□□ -0.39
SLC39A1-211ENST00000621013 DYNLRB2Q8TF09 96 aa12.6□□□□□ -0.39
SLC39A1-211ENST00000621013 TRAV8-4A0A0B4J246 113 aa12.59□□□□□ -0.39
SLC39A1-211ENST00000621013 IGLV5-39A0A0G2JS06 123 aa12.59□□□□□ -0.39
SLC39A1-211ENST00000621013 HERVK_113P63121 156 aa12.59□□□□□ -0.39
SLC39A1-211ENST00000621013 Q6ZSV7 163 aa12.59□□□□□ -0.39
SLC39A1-211ENST00000621013 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.59□□□□□ -0.39
SLC39A1-211ENST00000621013 CELSR2Q9HCU4 2923 aa12.59□□□□□ -0.39
SLC39A1-211ENST00000621013 IGHV3OR16-12A0A075B7B8 117 aa12.58□□□□□ -0.4
SLC39A1-211ENST00000621013 SNCGO76070 127 aa12.58□□□□□ -0.4
SLC39A1-211ENST00000621013 CIRBPQ14011 172 aaKnown RBP12.58□□□□□ -0.4
SLC39A1-211ENST00000621013 DGAT2L7PQ6IED9 249 aa12.58□□□□□ -0.4
SLC39A1-211ENST00000621013 IL17DQ8TAD2 202 aa12.57□□□□□ -0.4
SLC39A1-211ENST00000621013 COX6A2Q02221 97 aa12.56□□□□□ -0.4
SLC39A1-211ENST00000621013 Q6Q795 121 aa12.56□□□□□ -0.4
SLC39A1-211ENST00000621013 CLEC2BQ92478 149 aa12.56□□□□□ -0.4
SLC39A1-211ENST00000621013 ANAPC13Q9BS18 74 aa12.56□□□□□ -0.4
SLC39A1-211ENST00000621013 DEFB121Q5J5C9 76 aa12.56□□□□□ -0.4
SLC39A1-211ENST00000621013 LINC00242Q5T6M2 205 aa12.56□□□□□ -0.4
SLC39A1-211ENST00000621013 GAGE2BQ13066 116 aa12.55□□□□□ -0.4
SLC39A1-211ENST00000621013 GAGE2EQ4V326 116 aa12.55□□□□□ -0.4
SLC39A1-211ENST00000621013 GAGE2DQ9UEU5 116 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms