RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 CD28P10747 220 aa14.02□□□□□ -0.16
PCDHGB3-202ENST00000618934 SMAGPQ0VAQ4 97 aa14.02□□□□□ -0.16
PCDHGB3-202ENST00000618934 ARL17AQ8IVW1 177 aa14.02□□□□□ -0.16
PCDHGB3-202ENST00000618934 EIF4EBP3O60516 100 aaPredicted RBP14.02□□□□□ -0.17
PCDHGB3-202ENST00000618934 SMCPP49901 116 aaPredicted RBP14.02□□□□□ -0.17
PCDHGB3-202ENST00000618934 ZNF843Q8N446 348 aa14.02□□□□□ -0.17
PCDHGB3-202ENST00000618934 SIGMAR1Q99720 223 aa14.02□□□□□ -0.17
PCDHGB3-202ENST00000618934 CCDC168Q8NDH2 2452 aa14.01□□□□□ -0.17
PCDHGB3-202ENST00000618934 LEPROTO15243 131 aa14.01□□□□□ -0.17
PCDHGB3-202ENST00000618934 M0R2P5 195 aa14.01□□□□□ -0.17
PCDHGB3-202ENST00000618934 PSMB2P49721 201 aa14□□□□□ -0.17
PCDHGB3-202ENST00000618934 KRTAP1-3Q8IUG1 177 aa14□□□□□ -0.17
PCDHGB3-202ENST00000618934 C4orf3Q8WVX3 66 aa14□□□□□ -0.17
PCDHGB3-202ENST00000618934 NOTCH3Q9UM47 2321 aa14□□□□□ -0.17
PCDHGB3-202ENST00000618934 ADARB2-AS1A8MUL3 147 aa14□□□□□ -0.17
PCDHGB3-202ENST00000618934 CFAP126Q5VTH2 177 aa14□□□□□ -0.17
PCDHGB3-202ENST00000618934 SPXQ9BT56 116 aa14□□□□□ -0.17
PCDHGB3-202ENST00000618934 UBE2D3P61077 147 aa13.99□□□□□ -0.17
PCDHGB3-202ENST00000618934 UBE2D2P62837 147 aa13.99□□□□□ -0.17
PCDHGB3-202ENST00000618934 DEFB114Q30KQ6 69 aa13.99□□□□□ -0.17
PCDHGB3-202ENST00000618934 C11orf44Q8N8P7 122 aa13.99□□□□□ -0.17
PCDHGB3-202ENST00000618934 LINC01587Q99440 93 aa13.99□□□□□ -0.17
PCDHGB3-202ENST00000618934 C10orf126Q8N4M7 172 aa13.99□□□□□ -0.17
PCDHGB3-202ENST00000618934 C11orf72Q8NBR9 251 aa13.99□□□□□ -0.17
PCDHGB3-202ENST00000618934 EDA2RQ9HAV5 297 aa13.99□□□□□ -0.17
PCDHGB3-202ENST00000618934 TNFRSF18Q9Y5U5 241 aa13.99□□□□□ -0.17
PCDHGB3-202ENST00000618934 IGHV3-38A0A0C4DH36 116 aa13.98□□□□□ -0.17
PCDHGB3-202ENST00000618934 PEMTQ9UBM1 199 aa13.98□□□□□ -0.17
PCDHGB3-202ENST00000618934 TRAV8-3A0A0A6YYJ7 113 aa13.98□□□□□ -0.17
PCDHGB3-202ENST00000618934 DYNLRB2Q8TF09 96 aa13.98□□□□□ -0.17
PCDHGB3-202ENST00000618934 FLNAP21333 2647 aaKnown RBP13.97□□□□□ -0.17
PCDHGB3-202ENST00000618934 J3QR89 54 aa13.97□□□□□ -0.17
PCDHGB3-202ENST00000618934 CHCHD7Q9BUK0 85 aa13.97□□□□□ -0.17
PCDHGB3-202ENST00000618934 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.96□□□□□ -0.17
PCDHGB3-202ENST00000618934 IGKV2-29A2NJV5 120 aaPredicted RBP13.96□□□□□ -0.17
PCDHGB3-202ENST00000618934 A8MWV9 139 aa13.96□□□□□ -0.17
PCDHGB3-202ENST00000618934 SPATA25Q9BR10 227 aa13.96□□□□□ -0.17
PCDHGB3-202ENST00000618934 TRAV2A0A0B4J234 112 aa13.96□□□□□ -0.17
PCDHGB3-202ENST00000618934 A4D1N5 150 aa13.96□□□□□ -0.17
PCDHGB3-202ENST00000618934 ZNF415Q09FC8 603 aa13.96□□□□□ -0.17
PCDHGB3-202ENST00000618934 PYGO1Q9Y3Y4 419 aa13.96□□□□□ -0.17
PCDHGB3-202ENST00000618934 JMJD1CQ15652 2540 aa13.95□□□□□ -0.18
PCDHGB3-202ENST00000618934 A8MZ25 164 aa13.95□□□□□ -0.18
PCDHGB3-202ENST00000618934 TCL1BO95988 128 aa13.95□□□□□ -0.18
PCDHGB3-202ENST00000618934 IGHV3-30-3P0DP02 117 aa13.95□□□□□ -0.18
PCDHGB3-202ENST00000618934 Q6ZSV7 163 aa13.95□□□□□ -0.18
PCDHGB3-202ENST00000618934 MUSTN1Q8IVN3 82 aa13.95□□□□□ -0.18
PCDHGB3-202ENST00000618934 PTH2Q96A98 100 aa13.95□□□□□ -0.18
PCDHGB3-202ENST00000618934 XCL2Q9UBD3 114 aa13.95□□□□□ -0.18
PCDHGB3-202ENST00000618934 SETXQ7Z333 2677 aaKnown RBP13.95□□□□□ -0.18
PCDHGB3-202ENST00000618934 ZNF418Q8TF45 676 aaPredicted RBP13.94□□□□□ -0.18
PCDHGB3-202ENST00000618934 A0A1W2PRX2 142 aa13.94□□□□□ -0.18
PCDHGB3-202ENST00000618934 MRPS36P82909 103 aaKnown RBP13.94□□□□□ -0.18
PCDHGB3-202ENST00000618934 LINC00467Q9BRT7 94 aa13.94□□□□□ -0.18
PCDHGB3-202ENST00000618934 RAX2Q96IS3 184 aa13.93□□□□□ -0.18
PCDHGB3-202ENST00000618934 PRO1854Q9UHT4 67 aa13.93□□□□□ -0.18
PCDHGB3-202ENST00000618934 ODF3L2Q3SX64 289 aa13.93□□□□□ -0.18
PCDHGB3-202ENST00000618934 UBE2D4Q9Y2X8 147 aa13.93□□□□□ -0.18
PCDHGB3-202ENST00000618934 A0A0J9YXY3 114 aa13.92□□□□□ -0.18
PCDHGB3-202ENST00000618934 ACANP16112 2415 aa13.92□□□□□ -0.18
PCDHGB3-202ENST00000618934 IGHV3OR16-12A0A075B7B8 117 aa13.92□□□□□ -0.18
PCDHGB3-202ENST00000618934 SCGB1A1P11684 91 aa13.92□□□□□ -0.18
PCDHGB3-202ENST00000618934 TENM4Q6N022 2769 aa13.92□□□□□ -0.18
PCDHGB3-202ENST00000618934 Q6ZUT4 128 aa13.91□□□□□ -0.18
PCDHGB3-202ENST00000618934 TMEM263Q8WUH6 116 aaKnown RBP13.91□□□□□ -0.18
PCDHGB3-202ENST00000618934 TIMM21Q9BVV7 248 aa13.91□□□□□ -0.18
PCDHGB3-202ENST00000618934 C2CD3Q4AC94 2353 aa13.9□□□□□ -0.18
PCDHGB3-202ENST00000618934 H7C2G1 150 aa13.9□□□□□ -0.18
PCDHGB3-202ENST00000618934 INSP01308 110 aa13.9□□□□□ -0.18
PCDHGB3-202ENST00000618934 IGHV3-53P01767 116 aa13.9□□□□□ -0.18
PCDHGB3-202ENST00000618934 BEAN1Q3B7T3 259 aa13.9□□□□□ -0.18
PCDHGB3-202ENST00000618934 LRRC75A-AS1Q8N1F1 130 aa13.9□□□□□ -0.18
PCDHGB3-202ENST00000618934 WFDC11Q8NEX6 87 aa13.9□□□□□ -0.18
PCDHGB3-202ENST00000618934 LITAFQ99732 161 aa13.9□□□□□ -0.18
PCDHGB3-202ENST00000618934 IGHV3-33P01772 117 aa13.89□□□□□ -0.19
PCDHGB3-202ENST00000618934 SPINK8P0C7L1 97 aa13.89□□□□□ -0.19
PCDHGB3-202ENST00000618934 FOXI1Q12951 378 aa13.89□□□□□ -0.19
PCDHGB3-202ENST00000618934 ADAMTSL4-AS1Q5T5F5 129 aa13.89□□□□□ -0.19
PCDHGB3-202ENST00000618934 HIST2H2BCQ6DN03 193 aa13.89□□□□□ -0.19
PCDHGB3-202ENST00000618934 C1orf158Q8N1D5 194 aa13.89□□□□□ -0.19
PCDHGB3-202ENST00000618934 ESM1Q9NQ30 184 aa13.89□□□□□ -0.19
PCDHGB3-202ENST00000618934 PIK3CD-AS1Q5SR53 167 aa13.89□□□□□ -0.19
PCDHGB3-202ENST00000618934 C1QTNF4Q9BXJ3 329 aa13.89□□□□□ -0.19
PCDHGB3-202ENST00000618934 DNAJC9-AS1A6NH13 148 aa13.88□□□□□ -0.19
PCDHGB3-202ENST00000618934 RS1O15537 224 aa13.88□□□□□ -0.19
PCDHGB3-202ENST00000618934 SCGB1C2P0DMR2 95 aa13.87□□□□□ -0.19
PCDHGB3-202ENST00000618934 MTORP42345 2549 aa13.87□□□□□ -0.19
PCDHGB3-202ENST00000618934 IGHV1-58A0A0C4DH39 117 aa13.86□□□□□ -0.19
PCDHGB3-202ENST00000618934 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.86□□□□□ -0.19
PCDHGB3-202ENST00000618934 CIDEAO60543 219 aa13.86□□□□□ -0.19
PCDHGB3-202ENST00000618934 CARD19Q96LW7 228 aa13.86□□□□□ -0.19
PCDHGB3-202ENST00000618934 SPANXA1Q9NS26 97 aa13.86□□□□□ -0.19
PCDHGB3-202ENST00000618934 TINCRA0A1B0GVN0 87 aa13.85□□□□□ -0.19
PCDHGB3-202ENST00000618934 CRYBA4P53673 196 aa13.85□□□□□ -0.19
PCDHGB3-202ENST00000618934 VSIG2Q96IQ7 327 aa13.85□□□□□ -0.19
PCDHGB3-202ENST00000618934 ANK3Q12955 4377 aaKnown RBP13.85□□□□□ -0.19
PCDHGB3-202ENST00000618934 NDUFA12Q9UI09 145 aa13.85□□□□□ -0.19
PCDHGB3-202ENST00000618934 FHL3Q13643 280 aa13.84□□□□□ -0.19
PCDHGB3-202ENST00000618934 STHQ8IWL8 128 aa13.84□□□□□ -0.19
PCDHGB3-202ENST00000618934 CDIP1Q9H305 208 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms