RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 HTN1P15515 57 aa9.26□□□□□ -0.93
MATR3-227ENST00000618441 CD164Q04900 197 aa9.26□□□□□ -0.93
MATR3-227ENST00000618441 C9orf106Q8NAJ2 232 aa9.26□□□□□ -0.93
MATR3-227ENST00000618441 A0A0J9YXY3 114 aa9.25□□□□□ -0.93
MATR3-227ENST00000618441 BUB3O43684 328 aa9.25□□□□□ -0.93
MATR3-227ENST00000618441 OXTP01178 125 aa9.25□□□□□ -0.93
MATR3-227ENST00000618441 TIMM21Q9BVV7 248 aa9.25□□□□□ -0.93
MATR3-227ENST00000618441 TMEM223A0PJW6 202 aa9.25□□□□□ -0.93
MATR3-227ENST00000618441 SDHAF1A6NFY7 115 aa9.25□□□□□ -0.93
MATR3-227ENST00000618441 ECSCRQ19T08 205 aa9.25□□□□□ -0.93
MATR3-227ENST00000618441 NDUFA12Q9UI09 145 aa9.25□□□□□ -0.93
MATR3-227ENST00000618441 TACC2O95359 2948 aa9.25□□□□□ -0.93
MATR3-227ENST00000618441 LY6DQ14210 128 aa9.24□□□□□ -0.93
MATR3-227ENST00000618441 C20orf197Q8N268 126 aa9.24□□□□□ -0.93
MATR3-227ENST00000618441 TMEM243Q9BU79 118 aa9.24□□□□□ -0.93
MATR3-227ENST00000618441 RNASE1P07998 156 aaKnown RBP9.24□□□□□ -0.93
MATR3-227ENST00000618441 LINC00482Q8N8I6 264 aa9.24□□□□□ -0.93
MATR3-227ENST00000618441 Q9UF83 564 aa9.24□□□□□ -0.93
MATR3-227ENST00000618441 TSHBP01222 138 aa9.23□□□□□ -0.93
MATR3-227ENST00000618441 TMEM258P61165 79 aa9.23□□□□□ -0.93
MATR3-227ENST00000618441 FAM223AQ8IWN6 122 aa9.23□□□□□ -0.93
MATR3-227ENST00000618441 IGHV1-3A0A0C4DH29 117 aa9.23□□□□□ -0.93
MATR3-227ENST00000618441 IGHV7-4-1A0A0J9YVY3 117 aa9.23□□□□□ -0.93
MATR3-227ENST00000618441 LST1O00453 97 aa9.23□□□□□ -0.93
MATR3-227ENST00000618441 IGKV3-20P01619 116 aa9.23□□□□□ -0.93
MATR3-227ENST00000618441 WFDC9Q8NEX5 89 aa9.23□□□□□ -0.93
MATR3-227ENST00000618441 IMUPQ9GZP8 106 aa9.23□□□□□ -0.93
MATR3-227ENST00000618441 JMJD1CQ15652 2540 aa9.23□□□□□ -0.93
MATR3-227ENST00000618441 NAV2Q8IVL1 2488 aa9.22□□□□□ -0.93
MATR3-227ENST00000618441 SMAD5-AS1Q9Y6J3 95 aa9.22□□□□□ -0.93
MATR3-227ENST00000618441 FLNBO75369 2602 aaKnown RBP9.22□□□□□ -0.93
MATR3-227ENST00000618441 LEPROTO15243 131 aa9.22□□□□□ -0.93
MATR3-227ENST00000618441 ACYP1P07311 99 aa9.22□□□□□ -0.93
MATR3-227ENST00000618441 APOC4P55056 127 aa9.22□□□□□ -0.93
MATR3-227ENST00000618441 ADAMTSL4-AS1Q5T5F5 129 aa9.22□□□□□ -0.93
MATR3-227ENST00000618441 LY6G5BQ8NDX9 201 aa9.22□□□□□ -0.93
MATR3-227ENST00000618441 LRBAP50851 2863 aa9.22□□□□□ -0.93
MATR3-227ENST00000618441 ASH1LQ9NR48 2969 aaKnown RBP9.22□□□□□ -0.93
MATR3-227ENST00000618441 ZNF462Q96JM2 2506 aa9.21□□□□□ -0.93
MATR3-227ENST00000618441 TRAV23DV6A0A075B6W5 121 aa9.21□□□□□ -0.93
MATR3-227ENST00000618441 TRBV7-1A0A0A6YYK4 115 aa9.21□□□□□ -0.93
MATR3-227ENST00000618441 LINC01546A6NGU7 62 aa9.21□□□□□ -0.93
MATR3-227ENST00000618441 CNFNQ9BYD5 112 aa9.21□□□□□ -0.93
MATR3-227ENST00000618441 CD28P10747 220 aa9.21□□□□□ -0.94
MATR3-227ENST00000618441 CRYGAP11844 174 aa9.21□□□□□ -0.94
MATR3-227ENST00000618441 C14orf132Q9NPU4 83 aa9.21□□□□□ -0.94
MATR3-227ENST00000618441 USP9XQ93008 2570 aaPredicted RBP9.21□□□□□ -0.94
MATR3-227ENST00000618441 IGHV3-73A0A0B4J1V6 119 aa9.21□□□□□ -0.94
MATR3-227ENST00000618441 LYNX1G3V0Z9 82 aa9.21□□□□□ -0.94
MATR3-227ENST00000618441 LHBP01229 141 aa9.21□□□□□ -0.94
MATR3-227ENST00000618441 IGHV3-30-3P0DP02 117 aa9.21□□□□□ -0.94
MATR3-227ENST00000618441 LYNX1P0DP58 116 aa9.21□□□□□ -0.94
MATR3-227ENST00000618441 CSMD1Q96PZ7 3565 aa9.2□□□□□ -0.94
MATR3-227ENST00000618441 IGHV1-8P0DP01 117 aa9.2□□□□□ -0.94
MATR3-227ENST00000618441 RPS28P62857 69 aaKnown RBP9.2□□□□□ -0.94
MATR3-227ENST00000618441 RPL18AQ02543 176 aaKnown RBP9.2□□□□□ -0.94
MATR3-227ENST00000618441 USP17L23D6RBM5 183 aa9.2□□□□□ -0.94
MATR3-227ENST00000618441 BUB1B-PAK6H3BSN5 160 aa9.2□□□□□ -0.94
MATR3-227ENST00000618441 CLEC19AQ6UXS0 136 aa9.2□□□□□ -0.94
MATR3-227ENST00000618441 FAM19A1Q7Z5A9 133 aa9.2□□□□□ -0.94
MATR3-227ENST00000618441 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.2□□□□□ -0.94
MATR3-227ENST00000618441 APRG1Q8IVJ8 170 aa9.19□□□□□ -0.94
MATR3-227ENST00000618441 SERP2Q8N6R1 65 aa9.19□□□□□ -0.94
MATR3-227ENST00000618441 ZNF575Q86XF7 245 aa9.19□□□□□ -0.94
MATR3-227ENST00000618441 MRGPRG-AS1Q2M3A8 158 aa9.19□□□□□ -0.94
MATR3-227ENST00000618441 PRR9Q5T870 116 aa9.19□□□□□ -0.94
MATR3-227ENST00000618441 ABCA12Q86UK0 2595 aa9.18□□□□□ -0.94
MATR3-227ENST00000618441 ZNF876PQ49A33 203 aa9.18□□□□□ -0.94
MATR3-227ENST00000618441 TMEM178BH3BS89 294 aa9.18□□□□□ -0.94
MATR3-227ENST00000618441 ATP5G1P05496 136 aa9.17□□□□□ -0.94
MATR3-227ENST00000618441 TMEM141Q96I45 108 aa9.17□□□□□ -0.94
MATR3-227ENST00000618441 GHRHP01286 108 aa9.17□□□□□ -0.94
MATR3-227ENST00000618441 Q5XG85 94 aa9.17□□□□□ -0.94
MATR3-227ENST00000618441 C9orf85Q96MD7 179 aa9.17□□□□□ -0.94
MATR3-227ENST00000618441 SLC25A15Q9Y619 301 aa9.16□□□□□ -0.94
MATR3-227ENST00000618441 IGIPA6NJ69 53 aa9.16□□□□□ -0.94
MATR3-227ENST00000618441 PAX4O43316 350 aa9.16□□□□□ -0.94
MATR3-227ENST00000618441 HILS1P60008 231 aa9.16□□□□□ -0.94
MATR3-227ENST00000618441 SUMO4Q6EEV6 95 aa9.16□□□□□ -0.94
MATR3-227ENST00000618441 C11orf68Q9H3H3 251 aaKnown RBP9.16□□□□□ -0.94
MATR3-227ENST00000618441 TRAV21A0A0B4J279 112 aa9.16□□□□□ -0.94
MATR3-227ENST00000618441 RBM3P98179 157 aaKnown RBP9.16□□□□□ -0.94
MATR3-227ENST00000618441 TMEM30BQ3MIR4 351 aa9.15□□□□□ -0.94
MATR3-227ENST00000618441 AMELXQ99217 191 aa9.15□□□□□ -0.94
MATR3-227ENST00000618441 RBMY1BA6NDE4 496 aaKnown RBP9.15□□□□□ -0.94
MATR3-227ENST00000618441 RBMY1EA6NEQ0 496 aaKnown RBP9.15□□□□□ -0.94
MATR3-227ENST00000618441 RBMY1DP0C7P1 496 aaKnown RBP9.15□□□□□ -0.94
MATR3-227ENST00000618441 RBMY1A1P0DJD3 496 aaKnown RBP9.15□□□□□ -0.94
MATR3-227ENST00000618441 RBMY1FQ15415 496 aaKnown RBP9.15□□□□□ -0.94
MATR3-227ENST00000618441 MPLKIPQ8TAP9 179 aa9.15□□□□□ -0.94
MATR3-227ENST00000618441 PPP1R17O96001 155 aa9.15□□□□□ -0.94
MATR3-227ENST00000618441 C15orf32Q32M92 178 aa9.15□□□□□ -0.94
MATR3-227ENST00000618441 KLK9Q9UKQ9 250 aa9.15□□□□□ -0.94
MATR3-227ENST00000618441 KNCNA6PVL3 124 aa9.15□□□□□ -0.95
MATR3-227ENST00000618441 LINC01560Q8TB33 94 aa9.15□□□□□ -0.95
MATR3-227ENST00000618441 FAM223BA6NKX1 122 aa9.14□□□□□ -0.95
MATR3-227ENST00000618441 CTSGP08311 255 aa9.14□□□□□ -0.95
MATR3-227ENST00000618441 SAA4P35542 130 aa9.14□□□□□ -0.95
MATR3-227ENST00000618441 TMEM61Q8N0U2 210 aa9.14□□□□□ -0.95
MATR3-227ENST00000618441 FHL2Q14192 279 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms