RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 CITED2Q99967 270 aaPredicted RBP7.42□□□□□ -1.22
GGA3-221ENST00000614198 CHCHD5Q9BSY4 110 aa7.42□□□□□ -1.22
GGA3-221ENST00000614198 RHPN1-AS1Q9BWJ2 59 aa7.42□□□□□ -1.22
GGA3-221ENST00000614198 C9JAW5 83 aa7.42□□□□□ -1.22
GGA3-221ENST00000614198 SLC25A20O43772 301 aa7.42□□□□□ -1.22
GGA3-221ENST00000614198 PLEKHB2Q96CS7 222 aa7.42□□□□□ -1.22
GGA3-221ENST00000614198 SPXQ9BT56 116 aa7.42□□□□□ -1.22
GGA3-221ENST00000614198 LINC00694P0DN24 101 aa7.42□□□□□ -1.22
GGA3-221ENST00000614198 KRTAP10-3P60369 221 aa7.42□□□□□ -1.22
GGA3-221ENST00000614198 ANK2Q01484 3957 aa7.41□□□□□ -1.22
GGA3-221ENST00000614198 C5orf47Q569G3 176 aa7.41□□□□□ -1.22
GGA3-221ENST00000614198 NEXN-AS1Q8NBZ9 246 aa7.41□□□□□ -1.22
GGA3-221ENST00000614198 IGHV3-64A0A075B6Q5 118 aa7.41□□□□□ -1.22
GGA3-221ENST00000614198 C10orf126Q8N4M7 172 aa7.41□□□□□ -1.22
GGA3-221ENST00000614198 Q8N2B8 174 aa7.4□□□□□ -1.22
GGA3-221ENST00000614198 C14orf178Q8N769 122 aaPredicted RBP7.4□□□□□ -1.22
GGA3-221ENST00000614198 OR10J6PQ8NGY7 276 aa7.4□□□□□ -1.22
GGA3-221ENST00000614198 SPATA3Q8NHX4 192 aa7.4□□□□□ -1.22
GGA3-221ENST00000614198 F5H697 171 aa7.4□□□□□ -1.22
GGA3-221ENST00000614198 NDUFA4O00483 81 aa7.4□□□□□ -1.22
GGA3-221ENST00000614198 CFC1BP0CG36 223 aa7.4□□□□□ -1.22
GGA3-221ENST00000614198 CFC1P0CG37 223 aa7.4□□□□□ -1.22
GGA3-221ENST00000614198 RASL10AQ92737 203 aa7.4□□□□□ -1.22
GGA3-221ENST00000614198 MDFICQ9P1T7 246 aa7.4□□□□□ -1.22
GGA3-221ENST00000614198 NACAE9PAV3 2078 aa7.4□□□□□ -1.23
GGA3-221ENST00000614198 HILS1P60008 231 aa7.39□□□□□ -1.23
GGA3-221ENST00000614198 HERVK_113P61574 105 aa7.39□□□□□ -1.23
GGA3-221ENST00000614198 ODF3Q96PU9 254 aa7.39□□□□□ -1.23
GGA3-221ENST00000614198 TMEM126AQ9H061 195 aa7.39□□□□□ -1.23
GGA3-221ENST00000614198 U3KQE9 123 aa7.39□□□□□ -1.23
GGA3-221ENST00000614198 H3BUA1 57 aa7.39□□□□□ -1.23
GGA3-221ENST00000614198 NSUN5P1Q3KNT7 163 aa7.39□□□□□ -1.23
GGA3-221ENST00000614198 C2orf66Q6UXQ4 117 aa7.39□□□□□ -1.23
GGA3-221ENST00000614198 Q8N1Y9 231 aa7.39□□□□□ -1.23
GGA3-221ENST00000614198 RPL39LQ96EH5 51 aaKnown RBP7.39□□□□□ -1.23
GGA3-221ENST00000614198 LINC01600Q96MT4 127 aa7.39□□□□□ -1.23
GGA3-221ENST00000614198 DAZ1Q9NQZ3 744 aaKnown RBP7.39□□□□□ -1.23
GGA3-221ENST00000614198 PRO1854Q9UHT4 67 aa7.39□□□□□ -1.23
GGA3-221ENST00000614198 PHLDA3Q9Y5J5 127 aa7.39□□□□□ -1.23
GGA3-221ENST00000614198 A0A0J9YY99 117 aa7.39□□□□□ -1.23
GGA3-221ENST00000614198 IGKV3-20P01619 116 aa7.39□□□□□ -1.23
GGA3-221ENST00000614198 TOMM6Q96B49 74 aa7.39□□□□□ -1.23
GGA3-221ENST00000614198 UBE2E2Q96LR5 201 aa7.39□□□□□ -1.23
GGA3-221ENST00000614198 KLK5Q9Y337 293 aaPredicted RBP7.39□□□□□ -1.23
GGA3-221ENST00000614198 IGHV7-4-1A0A0J9YVY3 117 aa7.38□□□□□ -1.23
GGA3-221ENST00000614198 RNASE1P07998 156 aaKnown RBP7.38□□□□□ -1.23
GGA3-221ENST00000614198 C16orf92Q96LL3 132 aa7.38□□□□□ -1.23
GGA3-221ENST00000614198 SMIM2Q9BVW6 85 aa7.38□□□□□ -1.23
GGA3-221ENST00000614198 EDA2RQ9HAV5 297 aa7.38□□□□□ -1.23
GGA3-221ENST00000614198 TRAV2A0A0B4J234 112 aa7.38□□□□□ -1.23
GGA3-221ENST00000614198 IGKV3D-20A0A0C4DH25 116 aa7.38□□□□□ -1.23
GGA3-221ENST00000614198 PRSS2P07478 247 aa7.38□□□□□ -1.23
GGA3-221ENST00000614198 ELANEP08246 267 aa7.38□□□□□ -1.23
GGA3-221ENST00000614198 ORMDL2Q53FV1 153 aa7.38□□□□□ -1.23
GGA3-221ENST00000614198 C15orf53Q8NAA6 179 aa7.38□□□□□ -1.23
GGA3-221ENST00000614198 IGHV3-30P01768 117 aa7.37□□□□□ -1.23
GGA3-221ENST00000614198 IGHV3-30-5P0DP03 117 aa7.37□□□□□ -1.23
GGA3-221ENST00000614198 TRPT1Q86TN4 253 aaKnown RBP7.37□□□□□ -1.23
GGA3-221ENST00000614198 TRAV8-4A0A0B4J246 113 aa7.37□□□□□ -1.23
GGA3-221ENST00000614198 RPL13AP40429 203 aaKnown RBP7.37□□□□□ -1.23
GGA3-221ENST00000614198 NTN5Q8WTR8 489 aaPredicted RBP7.37□□□□□ -1.23
GGA3-221ENST00000614198 AGPAT4-IT1Q9H0P7 198 aa7.37□□□□□ -1.23
GGA3-221ENST00000614198 ZNF580Q9UK33 172 aa7.37□□□□□ -1.23
GGA3-221ENST00000614198 SMIM9A6NGZ8 99 aa7.37□□□□□ -1.23
GGA3-221ENST00000614198 SUMO2P61956 95 aaKnown RBP7.37□□□□□ -1.23
GGA3-221ENST00000614198 BAALCQ8WXS3 180 aa7.37□□□□□ -1.23
GGA3-221ENST00000614198 C11orf21Q9P2W6 132 aa7.37□□□□□ -1.23
GGA3-221ENST00000614198 LGALS3P17931 250 aaKnown RBP7.36□□□□□ -1.23
GGA3-221ENST00000614198 SLC25A29Q8N8R3 303 aa7.36□□□□□ -1.23
GGA3-221ENST00000614198 P0DMU3 169 aa7.36□□□□□ -1.23
GGA3-221ENST00000614198 FAM231AP0DMU4 169 aa7.36□□□□□ -1.23
GGA3-221ENST00000614198 FAM231CP0DMU5 169 aa7.36□□□□□ -1.23
GGA3-221ENST00000614198 TMEM86BQ8N661 226 aa7.36□□□□□ -1.23
GGA3-221ENST00000614198 PRR9Q5T870 116 aa7.35□□□□□ -1.23
GGA3-221ENST00000614198 IGHV4-4A0A075B6R2 117 aa7.35□□□□□ -1.23
GGA3-221ENST00000614198 DUSP14O95147 198 aaKnown RBP7.35□□□□□ -1.23
GGA3-221ENST00000614198 FAM74A4Q5TZK3 123 aa7.35□□□□□ -1.23
GGA3-221ENST00000614198 RNF152Q8N8N0 203 aa7.35□□□□□ -1.23
GGA3-221ENST00000614198 LINC01587Q99440 93 aa7.35□□□□□ -1.23
GGA3-221ENST00000614198 SOCS3O14543 225 aa7.34□□□□□ -1.23
GGA3-221ENST00000614198 FAM19A5Q7Z5A7 132 aaPredicted RBP7.34□□□□□ -1.23
GGA3-221ENST00000614198 ZNF256Q9Y2P7 627 aaPredicted RBP7.34□□□□□ -1.23
GGA3-221ENST00000614198 IGHV3-33P01772 117 aa7.34□□□□□ -1.23
GGA3-221ENST00000614198 PRM2P04554 102 aa7.34□□□□□ -1.23
GGA3-221ENST00000614198 NPC2P61916 151 aa7.34□□□□□ -1.23
GGA3-221ENST00000614198 C9orf153Q5TBE3 101 aa7.34□□□□□ -1.23
GGA3-221ENST00000614198 SLC50A1Q9BRV3 221 aa7.34□□□□□ -1.23
GGA3-221ENST00000614198 TRAV25A0A0B4J276 109 aa7.34□□□□□ -1.23
GGA3-221ENST00000614198 C11orf86A6NJI1 115 aa7.34□□□□□ -1.23
GGA3-221ENST00000614198 ZNF56Q15929 161 aa7.34□□□□□ -1.23
GGA3-221ENST00000614198 LINC01620Q4KN68 170 aa7.34□□□□□ -1.23
GGA3-221ENST00000614198 DCANP1Q8TF63 244 aa7.34□□□□□ -1.23
GGA3-221ENST00000614198 TP53TG1Q9Y2A0 90 aa7.34□□□□□ -1.23
GGA3-221ENST00000614198 TEX49A0A1B0GTD5 131 aa7.33□□□□□ -1.24
GGA3-221ENST00000614198 LGALS9O00182 355 aa7.33□□□□□ -1.24
GGA3-221ENST00000614198 ATXN8Q156A1 80 aa7.33□□□□□ -1.24
GGA3-221ENST00000614198 C4orf3Q8WVX3 66 aa7.33□□□□□ -1.24
GGA3-221ENST00000614198 ADARB2-AS1A8MUL3 147 aa7.33□□□□□ -1.24
GGA3-221ENST00000614198 PROK1P58294 105 aa7.33□□□□□ -1.24
GGA3-221ENST00000614198 PAPPA-AS1Q5QFB9 102 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms