RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 UBE2D2P62837 147 aa7.99□□□□□ -1.13
SLIRP-212ENST00000613856 Q9UF83 564 aa7.99□□□□□ -1.13
SLIRP-212ENST00000613856 H3BNG1 76 aa7.98□□□□□ -1.13
SLIRP-212ENST00000613856 I3L3M4 83 aa7.98□□□□□ -1.13
SLIRP-212ENST00000613856 PAX4O43316 350 aa7.98□□□□□ -1.13
SLIRP-212ENST00000613856 SNRPEP62304 92 aaKnown RBP7.98□□□□□ -1.13
SLIRP-212ENST00000613856 DAZ4Q86SG3 579 aaKnown RBP7.98□□□□□ -1.13
SLIRP-212ENST00000613856 HIST3H2BBQ8N257 126 aa7.98□□□□□ -1.13
SLIRP-212ENST00000613856 ZNRF2Q8NHG8 242 aa7.98□□□□□ -1.13
SLIRP-212ENST00000613856 VSIG2Q96IQ7 327 aa7.98□□□□□ -1.13
SLIRP-212ENST00000613856 KIR2DL4Q99706 377 aa7.98□□□□□ -1.13
SLIRP-212ENST00000613856 DAZ3Q9NR90 486 aaKnown RBP7.98□□□□□ -1.13
SLIRP-212ENST00000613856 TRAV26-1A0A087WT03 109 aa7.97□□□□□ -1.13
SLIRP-212ENST00000613856 TRAV10A0A0B4J240 114 aa7.97□□□□□ -1.13
SLIRP-212ENST00000613856 LOC100131303A0A0U1RQF7 123 aa7.97□□□□□ -1.13
SLIRP-212ENST00000613856 GAGE12JA6NER3 117 aa7.97□□□□□ -1.13
SLIRP-212ENST00000613856 NUPR1O60356 82 aa7.97□□□□□ -1.13
SLIRP-212ENST00000613856 HSBP1O75506 76 aa7.97□□□□□ -1.13
SLIRP-212ENST00000613856 GYPEP15421 78 aa7.97□□□□□ -1.13
SLIRP-212ENST00000613856 HTN3P15516 51 aa7.97□□□□□ -1.13
SLIRP-212ENST00000613856 GAGE1Q13065 139 aa7.97□□□□□ -1.13
SLIRP-212ENST00000613856 GAGE4Q13068 117 aa7.97□□□□□ -1.13
SLIRP-212ENST00000613856 GAGE5Q13069 117 aa7.97□□□□□ -1.13
SLIRP-212ENST00000613856 GAGE13Q4V321 117 aa7.97□□□□□ -1.13
SLIRP-212ENST00000613856 ORMDL2Q53FV1 153 aa7.97□□□□□ -1.13
SLIRP-212ENST00000613856 PACRGQ96M98 296 aaPredicted RBP7.97□□□□□ -1.13
SLIRP-212ENST00000613856 DEFB131BA0A096LNP1 70 aa7.96□□□□□ -1.14
SLIRP-212ENST00000613856 TSHBP01222 138 aa7.96□□□□□ -1.14
SLIRP-212ENST00000613856 LAGE3Q14657 143 aa7.96□□□□□ -1.14
SLIRP-212ENST00000613856 NEGR1Q7Z3B1 354 aa7.96□□□□□ -1.14
SLIRP-212ENST00000613856 IGHV1-24A0A0C4DH33 117 aa7.95□□□□□ -1.14
SLIRP-212ENST00000613856 COTL1Q14019 142 aa7.95□□□□□ -1.14
SLIRP-212ENST00000613856 TMEM97Q5BJF2 176 aa7.95□□□□□ -1.14
SLIRP-212ENST00000613856 SH2D6Q7Z4S9 175 aa7.95□□□□□ -1.14
SLIRP-212ENST00000613856 ICOSQ9Y6W8 199 aa7.95□□□□□ -1.14
SLIRP-212ENST00000613856 ABCA13Q86UQ4 5058 aa7.94□□□□□ -1.14
SLIRP-212ENST00000613856 A0A096LNJ9 63 aa7.94□□□□□ -1.14
SLIRP-212ENST00000613856 A0A0J9YY99 117 aa7.94□□□□□ -1.14
SLIRP-212ENST00000613856 LINC01549A6NIU2 74 aa7.94□□□□□ -1.14
SLIRP-212ENST00000613856 HBDP02042 147 aa7.94□□□□□ -1.14
SLIRP-212ENST00000613856 G0S2P27469 103 aa7.94□□□□□ -1.14
SLIRP-212ENST00000613856 S100A2P29034 98 aa7.94□□□□□ -1.14
SLIRP-212ENST00000613856 FCER1GP30273 86 aa7.94□□□□□ -1.14
SLIRP-212ENST00000613856 AMTP48728 403 aa7.94□□□□□ -1.14
SLIRP-212ENST00000613856 MRPL23Q16540 153 aaKnown RBP7.94□□□□□ -1.14
SLIRP-212ENST00000613856 PHLDA1Q8WV24 401 aaPredicted RBP7.94□□□□□ -1.14
SLIRP-212ENST00000613856 TMEM18Q96B42 140 aa7.94□□□□□ -1.14
SLIRP-212ENST00000613856 GTSF1LQ9H1H1 148 aa7.94□□□□□ -1.14
SLIRP-212ENST00000613856 IGHV3-38A0A0C4DH36 116 aa7.93□□□□□ -1.14
SLIRP-212ENST00000613856 IFITM10A6NMD0 228 aa7.93□□□□□ -1.14
SLIRP-212ENST00000613856 PDZD11Q5EBL8 140 aa7.93□□□□□ -1.14
SLIRP-212ENST00000613856 ATP6V0E2Q8NHE4 81 aa7.93□□□□□ -1.14
SLIRP-212ENST00000613856 HIST1H2BLQ99880 126 aa7.93□□□□□ -1.14
SLIRP-212ENST00000613856 VPS13DQ5THJ4 4388 aa7.93□□□□□ -1.14
SLIRP-212ENST00000613856 A0A096LPF7 62 aa7.92□□□□□ -1.14
SLIRP-212ENST00000613856 NUDT3O95989 172 aa7.92□□□□□ -1.14
SLIRP-212ENST00000613856 TIRAPP58753 221 aa7.92□□□□□ -1.14
SLIRP-212ENST00000613856 PMCHL1Q16048 86 aa7.92□□□□□ -1.14
SLIRP-212ENST00000613856 FAM19A2Q8N3H0 131 aa7.92□□□□□ -1.14
SLIRP-212ENST00000613856 C15orf53Q8NAA6 179 aa7.92□□□□□ -1.14
SLIRP-212ENST00000613856 KRTAP4-5Q9BYR2 181 aa7.92□□□□□ -1.14
SLIRP-212ENST00000613856 C2orf66Q6UXQ4 117 aa7.91□□□□□ -1.14
SLIRP-212ENST00000613856 NTM-AS1Q6ZSK4 140 aa7.91□□□□□ -1.14
SLIRP-212ENST00000613856 C20orf203Q8NBC4 194 aa7.91□□□□□ -1.14
SLIRP-212ENST00000613856 TOMM6Q96B49 74 aa7.91□□□□□ -1.14
SLIRP-212ENST00000613856 CHCHD7Q9BUK0 85 aa7.91□□□□□ -1.14
SLIRP-212ENST00000613856 CYSLTR1Q9Y271 337 aa7.91□□□□□ -1.14
SLIRP-212ENST00000613856 TRBV25-1A0A075B6N4 114 aa7.9□□□□□ -1.14
SLIRP-212ENST00000613856 TRBV6-8A0A0A6YYG3 113 aa7.9□□□□□ -1.14
SLIRP-212ENST00000613856 FABP4P15090 132 aa7.9□□□□□ -1.14
SLIRP-212ENST00000613856 BTF3P20290 206 aaKnown RBP7.9□□□□□ -1.14
SLIRP-212ENST00000613856 HSPB8Q9UJY1 196 aa7.9□□□□□ -1.14
SLIRP-212ENST00000613856 PKHD1P08F94 4074 aa7.9□□□□□ -1.15
SLIRP-212ENST00000613856 H7C423 109 aa7.89□□□□□ -1.15
SLIRP-212ENST00000613856 LEPROTL1O95214 131 aa7.89□□□□□ -1.15
SLIRP-212ENST00000613856 TMEM243Q9BU79 118 aa7.89□□□□□ -1.15
SLIRP-212ENST00000613856 LOC105371267A0A1B0GV96 52 aa7.88□□□□□ -1.15
SLIRP-212ENST00000613856 ATP5LO75964 103 aa7.88□□□□□ -1.15
SLIRP-212ENST00000613856 NPSP0C0P6 89 aa7.88□□□□□ -1.15
SLIRP-212ENST00000613856 DEFB104AQ8WTQ1 72 aa7.88□□□□□ -1.15
SLIRP-212ENST00000613856 TIMM17AQ99595 171 aa7.88□□□□□ -1.15
SLIRP-212ENST00000613856 TIMM21Q9BVV7 248 aa7.88□□□□□ -1.15
SLIRP-212ENST00000613856 NUPR2A6NF83 97 aa7.87□□□□□ -1.15
SLIRP-212ENST00000613856 IGIPA6NJ69 53 aa7.87□□□□□ -1.15
SLIRP-212ENST00000613856 RPL39P62891 51 aaKnown RBP7.87□□□□□ -1.15
SLIRP-212ENST00000613856 SMAGPQ0VAQ4 97 aa7.87□□□□□ -1.15
SLIRP-212ENST00000613856 LELP1Q5T871 98 aa7.87□□□□□ -1.15
SLIRP-212ENST00000613856 CEMP1Q6PRD7 247 aaPredicted RBP7.87□□□□□ -1.15
SLIRP-212ENST00000613856 ERASQ7Z444 233 aa7.87□□□□□ -1.15
SLIRP-212ENST00000613856 MRPL52Q86TS9 123 aaKnown RBP7.87□□□□□ -1.15
SLIRP-212ENST00000613856 SPANXA1Q9NS26 97 aa7.87□□□□□ -1.15
SLIRP-212ENST00000613856 PYGO1Q9Y3Y4 419 aa7.87□□□□□ -1.15
SLIRP-212ENST00000613856 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.86□□□□□ -1.15
SLIRP-212ENST00000613856 IGKV2-29A2NJV5 120 aaPredicted RBP7.86□□□□□ -1.15
SLIRP-212ENST00000613856 LYPD5Q6UWN5 251 aa7.86□□□□□ -1.15
SLIRP-212ENST00000613856 LINC00173Q6ZV60 143 aa7.86□□□□□ -1.15
SLIRP-212ENST00000613856 OR10D4PQ8NGN7 298 aa7.86□□□□□ -1.15
SLIRP-212ENST00000613856 IFI27L1Q96BM0 104 aa7.86□□□□□ -1.15
SLIRP-212ENST00000613856 TMEM141Q96I45 108 aa7.86□□□□□ -1.15
SLIRP-212ENST00000613856 SCGB3A1Q96QR1 104 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms