RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 TRBV10-1A0A0K0K1A3 114 aa6.34□□□□□ -1.39
CCDC47-207ENST00000612558 LYRM9A8MSI8 78 aa6.34□□□□□ -1.39
CCDC47-207ENST00000612558 H0Y8G0 127 aa6.34□□□□□ -1.39
CCDC47-207ENST00000612558 LINC01545Q5VT33 79 aa6.34□□□□□ -1.39
CCDC47-207ENST00000612558 C2orf66Q6UXQ4 117 aa6.34□□□□□ -1.39
CCDC47-207ENST00000612558 ZNF664Q8N3J9 261 aa6.34□□□□□ -1.39
CCDC47-207ENST00000612558 CYSLTR1Q9Y271 337 aa6.34□□□□□ -1.39
CCDC47-207ENST00000612558 PCP4L1A6NKN8 68 aa6.33□□□□□ -1.4
CCDC47-207ENST00000612558 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.33□□□□□ -1.4
CCDC47-207ENST00000612558 K7EQD1 137 aa6.33□□□□□ -1.4
CCDC47-207ENST00000612558 TSHBP01222 138 aa6.33□□□□□ -1.4
CCDC47-207ENST00000612558 RIPPLY3P57055 190 aa6.33□□□□□ -1.4
CCDC47-207ENST00000612558 LGALS9CQ6DKI2 356 aa6.33□□□□□ -1.4
CCDC47-207ENST00000612558 SCGB3A1Q96QR1 104 aa6.33□□□□□ -1.4
CCDC47-207ENST00000612558 VAMP8Q9BV40 100 aa6.33□□□□□ -1.4
CCDC47-207ENST00000612558 Q9UF83 564 aa6.33□□□□□ -1.4
CCDC47-207ENST00000612558 TRBV7-3A0A075B6L6 115 aa6.32□□□□□ -1.4
CCDC47-207ENST00000612558 TRGV4A0A0C4DH28 118 aa6.32□□□□□ -1.4
CCDC47-207ENST00000612558 IGHV4-28A0A0C4DH34 117 aa6.32□□□□□ -1.4
CCDC47-207ENST00000612558 TRBV6-4A0A1B0GX49 114 aa6.32□□□□□ -1.4
CCDC47-207ENST00000612558 PRSS1P07477 247 aa6.32□□□□□ -1.4
CCDC47-207ENST00000612558 DEFB130BP0DP73 79 aa6.32□□□□□ -1.4
CCDC47-207ENST00000612558 DEFB130AP0DP74 79 aa6.32□□□□□ -1.4
CCDC47-207ENST00000612558 PKIAP61925 76 aa6.32□□□□□ -1.4
CCDC47-207ENST00000612558 RPL36AP83881 106 aaKnown RBP6.32□□□□□ -1.4
CCDC47-207ENST00000612558 FAM222AQ5U5X8 452 aa6.32□□□□□ -1.4
CCDC47-207ENST00000612558 ERASQ7Z444 233 aa6.32□□□□□ -1.4
CCDC47-207ENST00000612558 SLC25A29Q8N8R3 303 aa6.32□□□□□ -1.4
CCDC47-207ENST00000612558 Q8NAQ8 132 aa6.32□□□□□ -1.4
CCDC47-207ENST00000612558 RPL36ALQ969Q0 106 aaKnown RBP6.32□□□□□ -1.4
CCDC47-207ENST00000612558 TP53TG1Q9Y2A0 90 aa6.32□□□□□ -1.4
CCDC47-207ENST00000612558 NOTCH1P46531 2555 aa6.32□□□□□ -1.4
CCDC47-207ENST00000612558 TRAV9-2A0A087WT02 112 aa6.31□□□□□ -1.4
CCDC47-207ENST00000612558 TSTD3H0UI37 97 aa6.31□□□□□ -1.4
CCDC47-207ENST00000612558 FHL2Q14192 279 aa6.31□□□□□ -1.4
CCDC47-207ENST00000612558 Q6ZN92 141 aa6.31□□□□□ -1.4
CCDC47-207ENST00000612558 ATOH7Q8N100 152 aa6.31□□□□□ -1.4
CCDC47-207ENST00000612558 ZNRF2Q8NHG8 242 aa6.31□□□□□ -1.4
CCDC47-207ENST00000612558 DEFB104AQ8WTQ1 72 aa6.31□□□□□ -1.4
CCDC47-207ENST00000612558 ZMAT4Q9H898 229 aa6.31□□□□□ -1.4
CCDC47-207ENST00000612558 DKK2Q9UBU2 259 aa6.31□□□□□ -1.4
CCDC47-207ENST00000612558 PAM16Q9Y3D7 125 aa6.31□□□□□ -1.4
CCDC47-207ENST00000612558 C20orf203Q8NBC4 194 aa6.31□□□□□ -1.4
CCDC47-207ENST00000612558 PMCHL2Q9BQD1 86 aa6.31□□□□□ -1.4
CCDC47-207ENST00000612558 PRO1933Q9H354 126 aa6.31□□□□□ -1.4
CCDC47-207ENST00000612558 TRAV12-1A0A0B4J245 112 aa6.3□□□□□ -1.4
CCDC47-207ENST00000612558 IGIPA6NJ69 53 aa6.3□□□□□ -1.4
CCDC47-207ENST00000612558 DEFB4AO15263 64 aa6.3□□□□□ -1.4
CCDC47-207ENST00000612558 SPART-AS1P0CW21 52 aa6.3□□□□□ -1.4
CCDC47-207ENST00000612558 UBE2D3P61077 147 aa6.3□□□□□ -1.4
CCDC47-207ENST00000612558 UBE2D2P62837 147 aa6.3□□□□□ -1.4
CCDC47-207ENST00000612558 RPL39P62891 51 aaKnown RBP6.3□□□□□ -1.4
CCDC47-207ENST00000612558 COTL1Q14019 142 aa6.3□□□□□ -1.4
CCDC47-207ENST00000612558 ODF1Q14990 250 aa6.3□□□□□ -1.4
CCDC47-207ENST00000612558 KRTAP5-3Q6L8H2 238 aa6.3□□□□□ -1.4
CCDC47-207ENST00000612558 DAZ4Q86SG3 579 aaKnown RBP6.3□□□□□ -1.4
CCDC47-207ENST00000612558 TMEM141Q96I45 108 aa6.3□□□□□ -1.4
CCDC47-207ENST00000612558 TIMM17AQ99595 171 aa6.3□□□□□ -1.4
CCDC47-207ENST00000612558 PRADC1Q9BSG0 188 aa6.3□□□□□ -1.4
CCDC47-207ENST00000612558 DAZ3Q9NR90 486 aaKnown RBP6.3□□□□□ -1.4
CCDC47-207ENST00000612558 HHLA3Q9XRX5 114 aa6.3□□□□□ -1.4
CCDC47-207ENST00000612558 MGAM2Q2M2H8 2515 aa6.3□□□□□ -1.4
CCDC47-207ENST00000612558 A0A087WX48 190 aa6.29□□□□□ -1.4
CCDC47-207ENST00000612558 IGHV3-38A0A0C4DH36 116 aa6.29□□□□□ -1.4
CCDC47-207ENST00000612558 GAGE12JA6NER3 117 aa6.29□□□□□ -1.4
CCDC47-207ENST00000612558 HSBP1L1C9JCN9 74 aa6.29□□□□□ -1.4
CCDC47-207ENST00000612558 GAGE1Q13065 139 aa6.29□□□□□ -1.4
CCDC47-207ENST00000612558 GAGE4Q13068 117 aa6.29□□□□□ -1.4
CCDC47-207ENST00000612558 GAGE5Q13069 117 aa6.29□□□□□ -1.4
CCDC47-207ENST00000612558 GAGE13Q4V321 117 aa6.29□□□□□ -1.4
CCDC47-207ENST00000612558 SPATA45Q537H7 98 aa6.29□□□□□ -1.4
CCDC47-207ENST00000612558 PHLDA1Q8WV24 401 aaPredicted RBP6.29□□□□□ -1.4
CCDC47-207ENST00000612558 TEX48A0A1B0GUV7 120 aa6.28□□□□□ -1.4
CCDC47-207ENST00000612558 DAD1P61803 113 aa6.28□□□□□ -1.4
CCDC47-207ENST00000612558 MAJINQ3KP22 176 aa6.28□□□□□ -1.4
CCDC47-207ENST00000612558 KPRPQ5T749 579 aaPredicted RBP6.28□□□□□ -1.4
CCDC47-207ENST00000612558 BAALCQ8WXS3 180 aa6.28□□□□□ -1.4
CCDC47-207ENST00000612558 CHCHD7Q9BUK0 85 aa6.28□□□□□ -1.4
CCDC47-207ENST00000612558 NBEAL1Q6ZS30 2694 aa6.28□□□□□ -1.4
CCDC47-207ENST00000612558 hDV102S1A0JD36 115 aa6.27□□□□□ -1.41
CCDC47-207ENST00000612558 MRPL35Q9NZE8 188 aaKnown RBP6.27□□□□□ -1.41
CCDC47-207ENST00000612558 PRO0255Q9UI72 69 aa6.27□□□□□ -1.41
CCDC47-207ENST00000612558 CELA1Q9UNI1 258 aa6.27□□□□□ -1.41
CCDC47-207ENST00000612558 PYGO1Q9Y3Y4 419 aa6.27□□□□□ -1.41
CCDC47-207ENST00000612558 LOC100131303A0A0U1RQF7 123 aa6.27□□□□□ -1.41
CCDC47-207ENST00000612558 PRSS29PA6NIE9 313 aa6.27□□□□□ -1.41
CCDC47-207ENST00000612558 F8VRH5 84 aa6.27□□□□□ -1.41
CCDC47-207ENST00000612558 DPM2O94777 84 aa6.27□□□□□ -1.41
CCDC47-207ENST00000612558 IGKCP01834 107 aa6.27□□□□□ -1.41
CCDC47-207ENST00000612558 ATP5G1P05496 136 aa6.27□□□□□ -1.41
CCDC47-207ENST00000612558 NPSP0C0P6 89 aa6.27□□□□□ -1.41
CCDC47-207ENST00000612558 DDTP30046 118 aa6.27□□□□□ -1.41
CCDC47-207ENST00000612558 CRYBA4P53673 196 aa6.27□□□□□ -1.41
CCDC47-207ENST00000612558 PAPPA-AS1Q5QFB9 102 aa6.27□□□□□ -1.41
CCDC47-207ENST00000612558 GTSF1LQ9H1H1 148 aa6.27□□□□□ -1.41
CCDC47-207ENST00000612558 CHTOPQ9Y3Y2 248 aaKnown RBP6.27□□□□□ -1.41
CCDC47-207ENST00000612558 LINC00694P0DN24 101 aa6.26□□□□□ -1.41
CCDC47-207ENST00000612558 PLNP26678 52 aa6.26□□□□□ -1.41
CCDC47-207ENST00000612558 PMVKQ15126 192 aa6.26□□□□□ -1.41
CCDC47-207ENST00000612558 MIEN1Q9BRT3 115 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms