RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 A8MZ25 164 aa12.46□□□□□ -0.41
TNIP1-220ENST00000610535 SNCGO76070 127 aa12.46□□□□□ -0.41
TNIP1-220ENST00000610535 ATXN8Q156A1 80 aa12.46□□□□□ -0.41
TNIP1-220ENST00000610535 PTPN13Q12923 2485 aa12.46□□□□□ -0.41
TNIP1-220ENST00000610535 B5MCH6 92 aa12.46□□□□□ -0.41
TNIP1-220ENST00000610535 LITAFQ99732 161 aa12.46□□□□□ -0.41
TNIP1-220ENST00000610535 TIMM21Q9BVV7 248 aa12.46□□□□□ -0.42
TNIP1-220ENST00000610535 Q9UF83 564 aa12.46□□□□□ -0.42
TNIP1-220ENST00000610535 NHLRC4P0CG21 123 aaPredicted RBP12.45□□□□□ -0.42
TNIP1-220ENST00000610535 GAGE2BQ13066 116 aa12.45□□□□□ -0.42
TNIP1-220ENST00000610535 GAGE2EQ4V326 116 aa12.45□□□□□ -0.42
TNIP1-220ENST00000610535 GAGE2DQ9UEU5 116 aa12.45□□□□□ -0.42
TNIP1-220ENST00000610535 M0QXV9 152 aa12.45□□□□□ -0.42
TNIP1-220ENST00000610535 CD28P10747 220 aa12.45□□□□□ -0.42
TNIP1-220ENST00000610535 PRM2P04554 102 aa12.44□□□□□ -0.42
TNIP1-220ENST00000610535 CFHR3Q02985 330 aa12.44□□□□□ -0.42
TNIP1-220ENST00000610535 TLN2Q9Y4G6 2542 aa12.44□□□□□ -0.42
TNIP1-220ENST00000610535 SNRPD3P62318 126 aaKnown RBP12.44□□□□□ -0.42
TNIP1-220ENST00000610535 SVIPQ8NHG7 77 aa12.43□□□□□ -0.42
TNIP1-220ENST00000610535 TRBV30A0A0K0K1B3 111 aa12.43□□□□□ -0.42
TNIP1-220ENST00000610535 DUX5Q96PT3 197 aa12.43□□□□□ -0.42
TNIP1-220ENST00000610535 ANKRD17O75179 2603 aaKnown RBP12.43□□□□□ -0.42
TNIP1-220ENST00000610535 ODF3Q96PU9 254 aa12.42□□□□□ -0.42
TNIP1-220ENST00000610535 TRAV8-4A0A0B4J246 113 aa12.42□□□□□ -0.42
TNIP1-220ENST00000610535 TRBV10-2A0A0K0K1G8 114 aa12.42□□□□□ -0.42
TNIP1-220ENST00000610535 KNCNA6PVL3 124 aa12.42□□□□□ -0.42
TNIP1-220ENST00000610535 K7EQG2 157 aa12.42□□□□□ -0.42
TNIP1-220ENST00000610535 GAGE5Q13069 117 aa12.42□□□□□ -0.42
TNIP1-220ENST00000610535 GAGE6Q13070 117 aa12.42□□□□□ -0.42
TNIP1-220ENST00000610535 MRPS36P82909 103 aaKnown RBP12.41□□□□□ -0.42
TNIP1-220ENST00000610535 NDUFA12Q9UI09 145 aa12.41□□□□□ -0.42
TNIP1-220ENST00000610535 AVPP01185 164 aa12.41□□□□□ -0.42
TNIP1-220ENST00000610535 RBMY1A1P0DJD3 496 aaKnown RBP12.41□□□□□ -0.42
TNIP1-220ENST00000610535 RBMY1CP0DJD4 496 aa12.41□□□□□ -0.42
TNIP1-220ENST00000610535 NDUFV3P56181 108 aaKnown RBP12.41□□□□□ -0.42
TNIP1-220ENST00000610535 RBMY1FQ15415 496 aaKnown RBP12.41□□□□□ -0.42
TNIP1-220ENST00000610535 MAPK1IP1LQ8NDC0 245 aa12.41□□□□□ -0.42
TNIP1-220ENST00000610535 CLEC2BQ92478 149 aa12.41□□□□□ -0.42
TNIP1-220ENST00000610535 PSMB8P28062 276 aa12.4□□□□□ -0.42
TNIP1-220ENST00000610535 C2orf82Q6UX34 121 aa12.4□□□□□ -0.42
TNIP1-220ENST00000610535 H3BMM0 161 aa12.4□□□□□ -0.42
TNIP1-220ENST00000610535 SYNJ2BPP57105 145 aa12.4□□□□□ -0.42
TNIP1-220ENST00000610535 C15orf53Q8NAA6 179 aa12.4□□□□□ -0.42
TNIP1-220ENST00000610535 UBE2WQ96B02 151 aa12.4□□□□□ -0.42
TNIP1-220ENST00000610535 ICOSQ9Y6W8 199 aa12.4□□□□□ -0.42
TNIP1-220ENST00000610535 H7C423 109 aa12.39□□□□□ -0.43
TNIP1-220ENST00000610535 TTC32Q5I0X7 151 aa12.39□□□□□ -0.43
TNIP1-220ENST00000610535 DAND5Q8N907 189 aa12.39□□□□□ -0.43
TNIP1-220ENST00000610535 CCL19Q99731 98 aa12.39□□□□□ -0.43
TNIP1-220ENST00000610535 PIMREGQ9BSJ6 248 aa12.39□□□□□ -0.43
TNIP1-220ENST00000610535 IGHV1-58A0A0C4DH39 117 aa12.39□□□□□ -0.43
TNIP1-220ENST00000610535 CCDC179H3BU77 68 aa12.39□□□□□ -0.43
TNIP1-220ENST00000610535 PYGO1Q9Y3Y4 419 aa12.39□□□□□ -0.43
TNIP1-220ENST00000610535 RPL13AP40429 203 aaKnown RBP12.38□□□□□ -0.43
TNIP1-220ENST00000610535 Q6ZSN1 163 aa12.38□□□□□ -0.43
TNIP1-220ENST00000610535 MXRA5Q9NR99 2828 aa12.38□□□□□ -0.43
TNIP1-220ENST00000610535 ATP5J2P56134 94 aa12.38□□□□□ -0.43
TNIP1-220ENST00000610535 IGHV4-30-2A0A087WSY4 118 aa12.37□□□□□ -0.43
TNIP1-220ENST00000610535 C10orf105Q8TEF2 133 aa12.37□□□□□ -0.43
TNIP1-220ENST00000610535 VSIG2Q96IQ7 327 aa12.37□□□□□ -0.43
TNIP1-220ENST00000610535 TNFRSF18Q9Y5U5 241 aa12.37□□□□□ -0.43
TNIP1-220ENST00000610535 NAV2Q8IVL1 2488 aa12.36□□□□□ -0.43
TNIP1-220ENST00000610535 NACAE9PAV3 2078 aa12.36□□□□□ -0.43
TNIP1-220ENST00000610535 TRGV11A0A075B6L2 103 aa12.36□□□□□ -0.43
TNIP1-220ENST00000610535 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.36□□□□□ -0.43
TNIP1-220ENST00000610535 IGKV2-29A2NJV5 120 aaPredicted RBP12.36□□□□□ -0.43
TNIP1-220ENST00000610535 IFITM1P13164 125 aa12.36□□□□□ -0.43
TNIP1-220ENST00000610535 IGHV4-59P01825 116 aa12.36□□□□□ -0.43
TNIP1-220ENST00000610535 MIAQ16674 131 aa12.36□□□□□ -0.43
TNIP1-220ENST00000610535 LINC01600Q96MT4 127 aa12.36□□□□□ -0.43
TNIP1-220ENST00000610535 DUX3Q96PT4 197 aa12.36□□□□□ -0.43
TNIP1-220ENST00000610535 SPANXDQ9BXN6 97 aa12.35□□□□□ -0.43
TNIP1-220ENST00000610535 SPANXCQ9NY87 97 aa12.35□□□□□ -0.43
TNIP1-220ENST00000610535 IGHV3-38A0A0C4DH36 116 aa12.34□□□□□ -0.43
TNIP1-220ENST00000610535 MSMBP08118 114 aa12.34□□□□□ -0.43
TNIP1-220ENST00000610535 CHCHD7Q9BUK0 85 aa12.34□□□□□ -0.43
TNIP1-220ENST00000610535 TEX15Q9BXT5 2789 aa12.34□□□□□ -0.43
TNIP1-220ENST00000610535 CCDC168Q8NDH2 2452 aa12.33□□□□□ -0.44
TNIP1-220ENST00000610535 COX6CP09669 75 aa12.33□□□□□ -0.44
TNIP1-220ENST00000610535 UBE2D4Q9Y2X8 147 aa12.33□□□□□ -0.44
TNIP1-220ENST00000610535 NBPF19A0A087WUL8 3843 aa12.33□□□□□ -0.44
TNIP1-220ENST00000610535 TINCRA0A1B0GVN0 87 aa12.33□□□□□ -0.44
TNIP1-220ENST00000610535 TMEM61Q8N0U2 210 aa12.33□□□□□ -0.44
TNIP1-220ENST00000610535 SONP18583 2426 aaKnown RBP12.33□□□□□ -0.44
TNIP1-220ENST00000610535 GAGE12JA6NER3 117 aa12.32□□□□□ -0.44
TNIP1-220ENST00000610535 GAGE7O76087 117 aa12.32□□□□□ -0.44
TNIP1-220ENST00000610535 GAGE12FP0CL80 117 aa12.32□□□□□ -0.44
TNIP1-220ENST00000610535 GAGE12GP0CL81 117 aa12.32□□□□□ -0.44
TNIP1-220ENST00000610535 GAGE12IP0CL82 117 aa12.32□□□□□ -0.44
TNIP1-220ENST00000610535 GAGE4Q13068 117 aa12.32□□□□□ -0.44
TNIP1-220ENST00000610535 A0A0U1RRA0 63 aa12.32□□□□□ -0.44
TNIP1-220ENST00000610535 LINC00467Q9BRT7 94 aa12.32□□□□□ -0.44
TNIP1-220ENST00000610535 CDKN2A-AS1Q9UH64 79 aa12.31□□□□□ -0.44
TNIP1-220ENST00000610535 DEFB112Q30KQ8 113 aa12.31□□□□□ -0.44
TNIP1-220ENST00000610535 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.31□□□□□ -0.44
TNIP1-220ENST00000610535 LST1O00453 97 aa12.3□□□□□ -0.44
TNIP1-220ENST00000610535 DEFB131AP59861 70 aa12.3□□□□□ -0.44
TNIP1-220ENST00000610535 BBC3Q96PG8 261 aaPredicted RBP12.3□□□□□ -0.44
TNIP1-220ENST00000610535 SETD2Q9BYW2 2564 aaPredicted RBP12.3□□□□□ -0.44
TNIP1-220ENST00000610535 HOXD3P31249 432 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms