RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 A0A0J9YX75 114 aa15.05■□□□□ -0
SSBP3-216ENST00000610401 RBMY1A1P0DJD3 496 aaKnown RBP15.05■□□□□ -0
SSBP3-216ENST00000610401 RBMY1CP0DJD4 496 aa15.05■□□□□ -0
SSBP3-216ENST00000610401 RBMY1FQ15415 496 aaKnown RBP15.05■□□□□ -0
SSBP3-216ENST00000610401 ACANP16112 2415 aa15.05■□□□□ -0
SSBP3-216ENST00000610401 TMEM223A0PJW6 202 aa15.04■□□□□ -0
SSBP3-216ENST00000610401 MSMBP08118 114 aa15.04■□□□□ -0
SSBP3-216ENST00000610401 IGHV3-30-3P0DP02 117 aa15.04■□□□□ -0
SSBP3-216ENST00000610401 DEFB131AP59861 70 aa15.04■□□□□ -0
SSBP3-216ENST00000610401 C20orf203Q8NBC4 194 aa15.04■□□□□ -0
SSBP3-216ENST00000610401 IGHV3-33P01772 117 aa15.04■□□□□ -0
SSBP3-216ENST00000610401 ADAMTSL4-AS1Q5T5F5 129 aa15.04■□□□□ -0
SSBP3-216ENST00000610401 LYRM7Q5U5X0 104 aa15.04■□□□□ -0
SSBP3-216ENST00000610401 CLEC2BQ92478 149 aa15.04■□□□□ -0
SSBP3-216ENST00000610401 NBEAL2Q6ZNJ1 2754 aa15.03■□□□□ -0
SSBP3-216ENST00000610401 TIMM21Q9BVV7 248 aa15.03■□□□□ -0
SSBP3-216ENST00000610401 LINC01619G3V211 115 aa15.02■□□□□ -0
SSBP3-216ENST00000610401 I3L3M4 83 aa15.02■□□□□ -0
SSBP3-216ENST00000610401 Q6ZSN1 163 aa15.02■□□□□ -0
SSBP3-216ENST00000610401 LGALS9O00182 355 aa15.02□□□□□ -0.01
SSBP3-216ENST00000610401 MED14OSP0DP75 135 aa15.01□□□□□ -0.01
SSBP3-216ENST00000610401 APRG1Q8IVJ8 170 aa15.01□□□□□ -0.01
SSBP3-216ENST00000610401 A0A0J9YXY3 114 aa15.01□□□□□ -0.01
SSBP3-216ENST00000610401 IGLV1-40P01703 118 aa15.01□□□□□ -0.01
SSBP3-216ENST00000610401 TNFRSF18Q9Y5U5 241 aa15.01□□□□□ -0.01
SSBP3-216ENST00000610401 CRLF1O75462 422 aa15.01□□□□□ -0.01
SSBP3-216ENST00000610401 SLURP1P55000 103 aa15.01□□□□□ -0.01
SSBP3-216ENST00000610401 KLK9Q2XQG4 91 aa15.01□□□□□ -0.01
SSBP3-216ENST00000610401 SCGB1A1P11684 91 aa15□□□□□ -0.01
SSBP3-216ENST00000610401 UCNP55089 124 aa15□□□□□ -0.01
SSBP3-216ENST00000610401 C10orf105Q8TEF2 133 aa15□□□□□ -0.01
SSBP3-216ENST00000610401 NXPH4O95158 308 aa15□□□□□ -0.01
SSBP3-216ENST00000610401 ANAPC13Q9BS18 74 aa15□□□□□ -0.01
SSBP3-216ENST00000610401 LEPROTO15243 131 aa14.99□□□□□ -0.01
SSBP3-216ENST00000610401 TRIAP1O43715 76 aa14.99□□□□□ -0.01
SSBP3-216ENST00000610401 TMEM263Q8WUH6 116 aaKnown RBP14.99□□□□□ -0.01
SSBP3-216ENST00000610401 C9orf85Q96MD7 179 aa14.99□□□□□ -0.01
SSBP3-216ENST00000610401 HOXD3P31249 432 aaPredicted RBP14.99□□□□□ -0.01
SSBP3-216ENST00000610401 ZNF469Q96JG9 3925 aaPredicted RBP14.98□□□□□ -0.01
SSBP3-216ENST00000610401 NDUFA7O95182 113 aa14.98□□□□□ -0.01
SSBP3-216ENST00000610401 IGHV3-53P01767 116 aa14.98□□□□□ -0.01
SSBP3-216ENST00000610401 TCTEX1D4Q5JR98 221 aa14.98□□□□□ -0.01
SSBP3-216ENST00000610401 NDUFA12Q9UI09 145 aa14.98□□□□□ -0.01
SSBP3-216ENST00000610401 TRAV4A0A0B4J268 109 aa14.97□□□□□ -0.01
SSBP3-216ENST00000610401 SS18L2Q9UHA2 77 aa14.97□□□□□ -0.01
SSBP3-216ENST00000610401 PSMB8P28062 276 aa14.96□□□□□ -0.01
SSBP3-216ENST00000610401 CFHR3Q02985 330 aa14.96□□□□□ -0.01
SSBP3-216ENST00000610401 TEX29Q8N6K0 151 aa14.95□□□□□ -0.02
SSBP3-216ENST00000610401 K7EQG2 157 aa14.95□□□□□ -0.02
SSBP3-216ENST00000610401 UBE2E2Q96LR5 201 aa14.95□□□□□ -0.02
SSBP3-216ENST00000610401 TTC32Q5I0X7 151 aa14.95□□□□□ -0.02
SSBP3-216ENST00000610401 LINC01620Q4KN68 170 aa14.94□□□□□ -0.02
SSBP3-216ENST00000610401 ATP6V0E2Q8NHE4 81 aa14.94□□□□□ -0.02
SSBP3-216ENST00000610401 C3orf56Q8N813 242 aa14.94□□□□□ -0.02
SSBP3-216ENST00000610401 LINC01587Q99440 93 aa14.94□□□□□ -0.02
SSBP3-216ENST00000610401 IGKV3OR2-268A0A0C4DH90 116 aa14.93□□□□□ -0.02
SSBP3-216ENST00000610401 B5MCH6 92 aa14.93□□□□□ -0.02
SSBP3-216ENST00000610401 DGAT2L7PQ6IED9 249 aa14.93□□□□□ -0.02
SSBP3-216ENST00000610401 POM121L12Q8N7R1 296 aa14.93□□□□□ -0.02
SSBP3-216ENST00000610401 ZFAND6Q6FIF0 208 aa14.93□□□□□ -0.02
SSBP3-216ENST00000610401 C2orf82Q6UX34 121 aa14.93□□□□□ -0.02
SSBP3-216ENST00000610401 NSUN5P1Q3KNT7 163 aa14.93□□□□□ -0.02
SSBP3-216ENST00000610401 LINC00467Q9BRT7 94 aa14.93□□□□□ -0.02
SSBP3-216ENST00000610401 XCL2Q9UBD3 114 aa14.93□□□□□ -0.02
SSBP3-216ENST00000610401 TRBV6-5A0A0K0K1A5 114 aa14.92□□□□□ -0.02
SSBP3-216ENST00000610401 SNCGO76070 127 aa14.92□□□□□ -0.02
SSBP3-216ENST00000610401 TRAV13-1A0A0B4J241 112 aa14.91□□□□□ -0.02
SSBP3-216ENST00000610401 CDKN2A-AS1Q9UH64 79 aa14.91□□□□□ -0.02
SSBP3-216ENST00000610401 A0A1W2PRX2 142 aa14.91□□□□□ -0.02
SSBP3-216ENST00000610401 RHOHQ15669 191 aa14.91□□□□□ -0.02
SSBP3-216ENST00000610401 ATXN8Q156A1 80 aa14.91□□□□□ -0.02
SSBP3-216ENST00000610401 H3BUA1 57 aa14.9□□□□□ -0.02
SSBP3-216ENST00000610401 NBPF19A0A087WUL8 3843 aa14.89□□□□□ -0.03
SSBP3-216ENST00000610401 B4DSR2 109 aa14.89□□□□□ -0.03
SSBP3-216ENST00000610401 K7EMT4 169 aa14.89□□□□□ -0.03
SSBP3-216ENST00000610401 M0R2P5 195 aa14.89□□□□□ -0.03
SSBP3-216ENST00000610401 GAGE2BQ13066 116 aa14.89□□□□□ -0.03
SSBP3-216ENST00000610401 GAGE2EQ4V326 116 aa14.89□□□□□ -0.03
SSBP3-216ENST00000610401 FAM104AQ969W3 186 aa14.89□□□□□ -0.03
SSBP3-216ENST00000610401 GAGE2DQ9UEU5 116 aa14.89□□□□□ -0.03
SSBP3-216ENST00000610401 RBMY1BA6NDE4 496 aaKnown RBP14.88□□□□□ -0.03
SSBP3-216ENST00000610401 RBMY1EA6NEQ0 496 aaKnown RBP14.88□□□□□ -0.03
SSBP3-216ENST00000610401 RBMY1DP0C7P1 496 aaKnown RBP14.88□□□□□ -0.03
SSBP3-216ENST00000610401 RPL13AP40429 203 aaKnown RBP14.88□□□□□ -0.03
SSBP3-216ENST00000610401 TMEM61Q8N0U2 210 aa14.88□□□□□ -0.03
SSBP3-216ENST00000610401 SETXQ7Z333 2677 aaKnown RBP14.88□□□□□ -0.03
SSBP3-216ENST00000610401 ICOSQ9Y6W8 199 aa14.88□□□□□ -0.03
SSBP3-216ENST00000610401 TRBV7-9A0A0J9YWB2 115 aa14.87□□□□□ -0.03
SSBP3-216ENST00000610401 RPL32P62910 135 aaKnown RBP14.87□□□□□ -0.03
SSBP3-216ENST00000610401 TRAV8-4A0A0B4J246 113 aa14.87□□□□□ -0.03
SSBP3-216ENST00000610401 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.87□□□□□ -0.03
SSBP3-216ENST00000610401 GCN1Q92616 2671 aaKnown RBP14.87□□□□□ -0.03
SSBP3-216ENST00000610401 TRGV11A0A075B6L2 103 aa14.87□□□□□ -0.03
SSBP3-216ENST00000610401 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.86□□□□□ -0.03
SSBP3-216ENST00000610401 COX6A2Q02221 97 aa14.86□□□□□ -0.03
SSBP3-216ENST00000610401 C15orf53Q8NAA6 179 aa14.86□□□□□ -0.03
SSBP3-216ENST00000610401 NOTCH2Q04721 2471 aa14.86□□□□□ -0.03
SSBP3-216ENST00000610401 IGHV1-58A0A0C4DH39 117 aa14.85□□□□□ -0.03
SSBP3-216ENST00000610401 LITAFQ99732 161 aa14.85□□□□□ -0.03
SSBP3-216ENST00000610401 H3BMM0 161 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms