RNA–Protein interactions for RNA: ENST00000607607.5

LINC00240-204, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best) BASIC

Gene LINC00240, Length 5,607 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-204ENST00000607607 C11orf72Q8NBR9 251 aa4.13□□□□□ -1.75
LINC00240-204ENST00000607607 RNASE3P12724 160 aaKnown RBP4.13□□□□□ -1.75
LINC00240-204ENST00000607607 ATP5IP56385 69 aaPredicted RBP4.13□□□□□ -1.75
LINC00240-204ENST00000607607 CCL8P80075 99 aa4.13□□□□□ -1.75
LINC00240-204ENST00000607607 UNQ9165/PRO28630Q6UXU0 137 aa4.13□□□□□ -1.75
LINC00240-204ENST00000607607 FANCD2OSQ96PS1 177 aa4.13□□□□□ -1.75
LINC00240-204ENST00000607607 LEPROTO15243 131 aa4.12□□□□□ -1.75
LINC00240-204ENST00000607607 NBR2O15453 112 aa4.12□□□□□ -1.75
LINC00240-204ENST00000607607 PIK3CD-AS1Q5SR53 167 aa4.12□□□□□ -1.75
LINC00240-204ENST00000607607 ZNF784Q8NCA9 323 aaPredicted RBP4.12□□□□□ -1.75
LINC00240-204ENST00000607607 TMEM243Q9BU79 118 aa4.12□□□□□ -1.75
LINC00240-204ENST00000607607 UBE2D4Q9Y2X8 147 aa4.12□□□□□ -1.75
LINC00240-204ENST00000607607 GPR179Q6PRD1 2367 aa4.12□□□□□ -1.75
LINC00240-204ENST00000607607 CXCL5P42830 114 aa4.12□□□□□ -1.75
LINC00240-204ENST00000607607 SUMO4Q6EEV6 95 aa4.12□□□□□ -1.75
LINC00240-204ENST00000607607 ZFAND3Q9H8U3 227 aa4.12□□□□□ -1.75
LINC00240-204ENST00000607607 KIF25-AS1Q9Y6Z4 181 aa4.12□□□□□ -1.75
LINC00240-204ENST00000607607 XCL1P47992 114 aa4.12□□□□□ -1.75
LINC00240-204ENST00000607607 S100A7L2Q5SY68 101 aa4.12□□□□□ -1.75
LINC00240-204ENST00000607607 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.12□□□□□ -1.75
LINC00240-204ENST00000607607 Q6ZTI0 123 aa4.12□□□□□ -1.75
LINC00240-204ENST00000607607 XCL2Q9UBD3 114 aa4.12□□□□□ -1.75
LINC00240-204ENST00000607607 IGKV3-15P01624 115 aa4.12□□□□□ -1.75
LINC00240-204ENST00000607607 GRNP28799 593 aaKnown RBP4.12□□□□□ -1.75
LINC00240-204ENST00000607607 COX6A2Q02221 97 aa4.12□□□□□ -1.75
LINC00240-204ENST00000607607 ATOX1O00244 68 aa4.11□□□□□ -1.75
LINC00240-204ENST00000607607 GHRHP01286 108 aa4.11□□□□□ -1.75
LINC00240-204ENST00000607607 ORMDL2Q53FV1 153 aa4.11□□□□□ -1.75
LINC00240-204ENST00000607607 ENHOQ6UWT2 76 aa4.11□□□□□ -1.75
LINC00240-204ENST00000607607 CNEP1R1Q8N9A8 125 aa4.11□□□□□ -1.75
LINC00240-204ENST00000607607 RPL11P62913 178 aaKnown RBP4.11□□□□□ -1.75
LINC00240-204ENST00000607607 CACNA1GO43497 2377 aa4.11□□□□□ -1.75
LINC00240-204ENST00000607607 SUB1P53999 127 aaKnown RBP eCLIP4.1□□□□□ -1.75
LINC00240-204ENST00000607607 IGHV3-73A0A0B4J1V6 119 aa4.1□□□□□ -1.75
LINC00240-204ENST00000607607 CTSGP08311 255 aa4.1□□□□□ -1.75
LINC00240-204ENST00000607607 POLR2KP53803 58 aaKnown RBP4.1□□□□□ -1.75
LINC00240-204ENST00000607607 FAM74A4Q5TZK3 123 aa4.1□□□□□ -1.75
LINC00240-204ENST00000607607 IGKV3-7A0A075B6H7 116 aa4.1□□□□□ -1.75
LINC00240-204ENST00000607607 IGLV4-3A0A075B6K6 122 aa4.1□□□□□ -1.75
LINC00240-204ENST00000607607 PSMG4Q5JS54 123 aa4.1□□□□□ -1.75
LINC00240-204ENST00000607607 ESM1Q9NQ30 184 aa4.1□□□□□ -1.75
LINC00240-204ENST00000607607 LYNX1G3V0Z9 82 aa4.09□□□□□ -1.75
LINC00240-204ENST00000607607 LYNX1P0DP58 116 aa4.09□□□□□ -1.75
LINC00240-204ENST00000607607 MIAQ16674 131 aa4.09□□□□□ -1.75
LINC00240-204ENST00000607607 LYPD1Q8N2G4 141 aa4.09□□□□□ -1.75
LINC00240-204ENST00000607607 LINC00574Q9H8X3 128 aa4.09□□□□□ -1.75
LINC00240-204ENST00000607607 APCP25054 2843 aa4.09□□□□□ -1.75
LINC00240-204ENST00000607607 IGHV4-4A0A075B6R2 117 aa4.09□□□□□ -1.75
LINC00240-204ENST00000607607 TRBV7-6A0A0J9YX20 115 aa4.09□□□□□ -1.75
LINC00240-204ENST00000607607 F8WEM9 126 aa4.09□□□□□ -1.75
LINC00240-204ENST00000607607 IGHV1-46P01743 117 aa4.09□□□□□ -1.75
LINC00240-204ENST00000607607 C6orf223Q8N319 242 aa4.09□□□□□ -1.75
LINC00240-204ENST00000607607 SPANXA1Q9NS26 97 aa4.09□□□□□ -1.75
LINC00240-204ENST00000607607 TRBV27A0A0K0K1C4 114 aa4.09□□□□□ -1.75
LINC00240-204ENST00000607607 SDHAF1A6NFY7 115 aa4.09□□□□□ -1.75
LINC00240-204ENST00000607607 UTP20O75691 2785 aaKnown RBP4.09□□□□□ -1.76
LINC00240-204ENST00000607607 C11orf45Q8TAV5 145 aa4.09□□□□□ -1.76
LINC00240-204ENST00000607607 SLC25A15Q9Y619 301 aa4.09□□□□□ -1.76
LINC00240-204ENST00000607607 CCKP06307 115 aa4.08□□□□□ -1.76
LINC00240-204ENST00000607607 PRIMA1Q86XR5 153 aa4.08□□□□□ -1.76
LINC00240-204ENST00000607607 ZFAND2AQ8N6M9 145 aa4.08□□□□□ -1.76
LINC00240-204ENST00000607607 C9orf106Q8NAJ2 232 aa4.08□□□□□ -1.76
LINC00240-204ENST00000607607 TEX15Q9BXT5 2789 aa4.08□□□□□ -1.76
LINC00240-204ENST00000607607 COX7A1P24310 79 aa4.08□□□□□ -1.76
LINC00240-204ENST00000607607 RNASE4P34096 147 aaKnown RBP4.08□□□□□ -1.76
LINC00240-204ENST00000607607 NDUFA12Q9UI09 145 aa4.08□□□□□ -1.76
LINC00240-204ENST00000607607 A0A1W2PNU3 283 aaPredicted RBP4.08□□□□□ -1.76
LINC00240-204ENST00000607607 CCL5P13501 91 aa4.08□□□□□ -1.76
LINC00240-204ENST00000607607 IGHV1-3A0A0C4DH29 117 aa4.08□□□□□ -1.76
LINC00240-204ENST00000607607 IGKV2-29A2NJV5 120 aaPredicted RBP4.08□□□□□ -1.76
LINC00240-204ENST00000607607 ITLN2Q8WWU7 325 aaPredicted RBP4.08□□□□□ -1.76
LINC00240-204ENST00000607607 SPTBN1Q01082 2364 aaKnown RBP4.08□□□□□ -1.76
LINC00240-204ENST00000607607 SNRPD3P62318 126 aaKnown RBP4.08□□□□□ -1.76
LINC00240-204ENST00000607607 CR1P17927 2039 aa4.07□□□□□ -1.76
LINC00240-204ENST00000607607 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.07□□□□□ -1.76
LINC00240-204ENST00000607607 M0R1B8 84 aa4.07□□□□□ -1.76
LINC00240-204ENST00000607607 TM2D3Q9BRN9 247 aa4.07□□□□□ -1.76
LINC00240-204ENST00000607607 AKAP6Q13023 2319 aa4.07□□□□□ -1.76
LINC00240-204ENST00000607607 UBR5O95071 2799 aaPredicted RBP4.07□□□□□ -1.76
LINC00240-204ENST00000607607 Q6ZSN1 163 aa4.07□□□□□ -1.76
LINC00240-204ENST00000607607 TMEM190Q8WZ59 177 aa4.07□□□□□ -1.76
LINC00240-204ENST00000607607 IGKV2-28A0A075B6P5 120 aa4.07□□□□□ -1.76
LINC00240-204ENST00000607607 COX7A2LO14548 114 aa4.07□□□□□ -1.76
LINC00240-204ENST00000607607 TIMM17BO60830 172 aa4.07□□□□□ -1.76
LINC00240-204ENST00000607607 IGKV2D-28P01615 120 aa4.07□□□□□ -1.76
LINC00240-204ENST00000607607 LINC00337Q8N6G1 96 aa4.07□□□□□ -1.76
LINC00240-204ENST00000607607 TRAV12-2A0A075B6T6 113 aa4.07□□□□□ -1.76
LINC00240-204ENST00000607607 PSMB8P28062 276 aa4.07□□□□□ -1.76
LINC00240-204ENST00000607607 LINC00308Q8TCZ7 52 aa4.07□□□□□ -1.76
LINC00240-204ENST00000607607 SPANXCQ9NY87 97 aa4.07□□□□□ -1.76
LINC00240-204ENST00000607607 ZANQ9Y493 2812 aa4.06□□□□□ -1.76
LINC00240-204ENST00000607607 PATE3B3GLJ2 98 aa4.06□□□□□ -1.76
LINC00240-204ENST00000607607 SPANXDQ9BXN6 97 aa4.06□□□□□ -1.76
LINC00240-204ENST00000607607 NCOR1O75376 2440 aa4.06□□□□□ -1.76
LINC00240-204ENST00000607607 SPTA1P02549 2419 aa4.06□□□□□ -1.76
LINC00240-204ENST00000607607 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.06□□□□□ -1.76
LINC00240-204ENST00000607607 PRB2P02812 416 aaPredicted RBP4.06□□□□□ -1.76
LINC00240-204ENST00000607607 CD59P13987 128 aa4.06□□□□□ -1.76
LINC00240-204ENST00000607607 PDE6HQ13956 83 aa4.06□□□□□ -1.76
LINC00240-204ENST00000607607 VMA21Q3ZAQ7 101 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms