RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 C17orf58Q2M2W7 97 aa6.32□□□□□ -1.4
COMMD3-215ENST00000602574 Q9HAA7 133 aa6.32□□□□□ -1.4
COMMD3-215ENST00000602574 ORMDL1Q9P0S3 153 aa6.32□□□□□ -1.4
COMMD3-215ENST00000602574 SRCAPQ6ZRS2 3230 aa6.31□□□□□ -1.4
COMMD3-215ENST00000602574 F5P12259 2224 aa6.31□□□□□ -1.4
COMMD3-215ENST00000602574 LINC00167Q96N53 147 aa6.31□□□□□ -1.4
COMMD3-215ENST00000602574 PSPHP1O15172 72 aa6.3□□□□□ -1.4
COMMD3-215ENST00000602574 BBC3Q96PG8 261 aaPredicted RBP6.3□□□□□ -1.4
COMMD3-215ENST00000602574 LINC01554Q52M75 96 aa6.3□□□□□ -1.4
COMMD3-215ENST00000602574 LIMD2Q9BT23 127 aa6.3□□□□□ -1.4
COMMD3-215ENST00000602574 TTTY12Q9BZ98 90 aa6.3□□□□□ -1.4
COMMD3-215ENST00000602574 ZNF576Q9H609 170 aa6.3□□□□□ -1.4
COMMD3-215ENST00000602574 PCNX2A6NKB5 2137 aa6.29□□□□□ -1.4
COMMD3-215ENST00000602574 PINLYPA6NC86 204 aa6.29□□□□□ -1.4
COMMD3-215ENST00000602574 KLLNB2CW77 178 aa6.29□□□□□ -1.4
COMMD3-215ENST00000602574 IGKV1-16P04430 117 aa6.29□□□□□ -1.4
COMMD3-215ENST00000602574 LINC01547P58512 204 aaPredicted RBP6.29□□□□□ -1.4
COMMD3-215ENST00000602574 LINC00313P59037 77 aa6.29□□□□□ -1.4
COMMD3-215ENST00000602574 MIR7-3HGQ8N6C7 128 aa6.29□□□□□ -1.4
COMMD3-215ENST00000602574 Q8TAT8 98 aa6.29□□□□□ -1.4
COMMD3-215ENST00000602574 ARFGEF3Q5TH69 2177 aa6.29□□□□□ -1.4
COMMD3-215ENST00000602574 PSCAO43653 123 aa6.29□□□□□ -1.4
COMMD3-215ENST00000602574 IGLV1-44P01699 117 aa6.29□□□□□ -1.4
COMMD3-215ENST00000602574 RPL39P62891 51 aaKnown RBP6.29□□□□□ -1.4
COMMD3-215ENST00000602574 DEFB119Q8N690 84 aa6.29□□□□□ -1.4
COMMD3-215ENST00000602574 IGHV3-64A0A075B6Q5 118 aa6.28□□□□□ -1.4
COMMD3-215ENST00000602574 TRBV6-8A0A0A6YYG3 113 aa6.28□□□□□ -1.4
COMMD3-215ENST00000602574 A0A0J9YXV3 536 aa6.28□□□□□ -1.4
COMMD3-215ENST00000602574 HCG22E2RYF7 251 aa6.28□□□□□ -1.4
COMMD3-215ENST00000602574 NCR3O14931 201 aa6.28□□□□□ -1.4
COMMD3-215ENST00000602574 IGKV1-17P01599 117 aa6.28□□□□□ -1.4
COMMD3-215ENST00000602574 IGHV3-48P01763 117 aa6.28□□□□□ -1.4
COMMD3-215ENST00000602574 MP68P56378 58 aa6.28□□□□□ -1.4
COMMD3-215ENST00000602574 NDPQ00604 133 aa6.28□□□□□ -1.4
COMMD3-215ENST00000602574 C1orf64Q8NEQ6 169 aa6.28□□□□□ -1.4
COMMD3-215ENST00000602574 C11orf21Q9P2W6 132 aa6.28□□□□□ -1.4
COMMD3-215ENST00000602574 RPL11P62913 178 aaKnown RBP6.28□□□□□ -1.4
COMMD3-215ENST00000602574 Q8N3U1 123 aa6.28□□□□□ -1.4
COMMD3-215ENST00000602574 IGLV4-3A0A075B6K6 122 aa6.27□□□□□ -1.41
COMMD3-215ENST00000602574 IGHV1-2P23083 117 aa6.27□□□□□ -1.41
COMMD3-215ENST00000602574 ASB16-AS1Q495Z4 193 aa6.27□□□□□ -1.41
COMMD3-215ENST00000602574 CDC42SE1Q9NRR8 79 aa6.27□□□□□ -1.41
COMMD3-215ENST00000602574 LENEPQ9Y5L5 61 aa6.27□□□□□ -1.41
COMMD3-215ENST00000602574 Q75L30 129 aa6.27□□□□□ -1.41
COMMD3-215ENST00000602574 C11orf72Q8NBR9 251 aa6.27□□□□□ -1.41
COMMD3-215ENST00000602574 ZNF580Q9UK33 172 aa6.27□□□□□ -1.41
COMMD3-215ENST00000602574 ASCC3Q8N3C0 2202 aaKnown RBP6.27□□□□□ -1.41
COMMD3-215ENST00000602574 LOC110117498A0A087WWA1 95 aa6.26□□□□□ -1.41
COMMD3-215ENST00000602574 A0A087X002 238 aa6.26□□□□□ -1.41
COMMD3-215ENST00000602574 LINC01356Q8N9X3 169 aa6.26□□□□□ -1.41
COMMD3-215ENST00000602574 ITLN2Q8WWU7 325 aaPredicted RBP6.26□□□□□ -1.41
COMMD3-215ENST00000602574 MDFIQ99750 246 aa6.26□□□□□ -1.41
COMMD3-215ENST00000602574 A0A087WYN8 130 aa6.25□□□□□ -1.41
COMMD3-215ENST00000602574 LCE6AA0A183 80 aa6.25□□□□□ -1.41
COMMD3-215ENST00000602574 I3L2K1 104 aa6.25□□□□□ -1.41
COMMD3-215ENST00000602574 CRPP02741 224 aa6.25□□□□□ -1.41
COMMD3-215ENST00000602574 S100A4P26447 101 aaKnown RBP6.25□□□□□ -1.41
COMMD3-215ENST00000602574 C9orf106Q8NAJ2 232 aa6.25□□□□□ -1.41
COMMD3-215ENST00000602574 TRAV21A0A0B4J279 112 aa6.25□□□□□ -1.41
COMMD3-215ENST00000602574 IGKV2-29A2NJV5 120 aaPredicted RBP6.25□□□□□ -1.41
COMMD3-215ENST00000602574 IGLV2-23P01705 113 aa6.25□□□□□ -1.41
COMMD3-215ENST00000602574 LINC00337Q8N6G1 96 aa6.25□□□□□ -1.41
COMMD3-215ENST00000602574 C20orf203Q8NBC4 194 aa6.25□□□□□ -1.41
COMMD3-215ENST00000602574 RNF5Q99942 180 aa6.25□□□□□ -1.41
COMMD3-215ENST00000602574 OCR1Q9BZK8 76 aa6.25□□□□□ -1.41
COMMD3-215ENST00000602574 TNCP24821 2201 aa6.25□□□□□ -1.41
COMMD3-215ENST00000602574 ASXL3Q9C0F0 2248 aa6.25□□□□□ -1.41
COMMD3-215ENST00000602574 H0Y9J4 135 aa6.24□□□□□ -1.41
COMMD3-215ENST00000602574 BPY2O14599 106 aa6.24□□□□□ -1.41
COMMD3-215ENST00000602574 IGLV5-45A0A087WSX0 123 aa6.24□□□□□ -1.41
COMMD3-215ENST00000602574 MGPP08493 103 aa6.24□□□□□ -1.41
COMMD3-215ENST00000602574 PDE6GP18545 87 aa6.24□□□□□ -1.41
COMMD3-215ENST00000602574 SPTSSBQ8NFR3 76 aa6.24□□□□□ -1.41
COMMD3-215ENST00000602574 A8MU10 97 aa6.23□□□□□ -1.41
COMMD3-215ENST00000602574 CHKB-CPT1BH3BT56 60 aa6.23□□□□□ -1.41
COMMD3-215ENST00000602574 RPL27AP46776 148 aaKnown RBP6.23□□□□□ -1.41
COMMD3-215ENST00000602574 LINC00315P59091 139 aa6.23□□□□□ -1.41
COMMD3-215ENST00000602574 C10orf55Q5SWW7 151 aa6.23□□□□□ -1.41
COMMD3-215ENST00000602574 SPINK14Q6IE38 97 aa6.23□□□□□ -1.41
COMMD3-215ENST00000602574 GAFA1Q96PS6 74 aa6.23□□□□□ -1.41
COMMD3-215ENST00000602574 PI4KAP42356 2102 aa6.23□□□□□ -1.41
COMMD3-215ENST00000602574 IGLV3-9A0A075B6K5 115 aa6.23□□□□□ -1.41
COMMD3-215ENST00000602574 ZNHIT1O43257 154 aa6.23□□□□□ -1.41
COMMD3-215ENST00000602574 COL27A1Q8IZC6 1860 aaPredicted RBP6.22□□□□□ -1.41
COMMD3-215ENST00000602574 MRGPRG-AS1Q2M3A8 158 aa6.22□□□□□ -1.41
COMMD3-215ENST00000602574 C9orf47Q6ZRZ4 202 aa6.22□□□□□ -1.41
COMMD3-215ENST00000602574 KRTAP3-3Q9BYR6 98 aa6.22□□□□□ -1.41
COMMD3-215ENST00000602574 KRTAP3-2Q9BYR7 98 aa6.22□□□□□ -1.41
COMMD3-215ENST00000602574 IGHV1OR15-1A0A075B7D0 117 aa6.22□□□□□ -1.41
COMMD3-215ENST00000602574 LOC101927531A0A1B0GV80 90 aa6.22□□□□□ -1.41
COMMD3-215ENST00000602574 K7EQG2 157 aa6.22□□□□□ -1.41
COMMD3-215ENST00000602574 LY6HO94772 140 aa6.22□□□□□ -1.41
COMMD3-215ENST00000602574 SPINK2P20155 84 aa6.22□□□□□ -1.41
COMMD3-215ENST00000602574 IGFL4Q6B9Z1 124 aa6.22□□□□□ -1.41
COMMD3-215ENST00000602574 ZNRF1Q8ND25 227 aa6.22□□□□□ -1.41
COMMD3-215ENST00000602574 MALRD1Q5VYJ5 2156 aa6.21□□□□□ -1.41
COMMD3-215ENST00000602574 C3orf84H3BNL1 204 aa6.21□□□□□ -1.42
COMMD3-215ENST00000602574 LECT2O14960 151 aa6.21□□□□□ -1.42
COMMD3-215ENST00000602574 Q6ZQT0 140 aa6.21□□□□□ -1.42
COMMD3-215ENST00000602574 DOCK10Q96BY6 2186 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 211.7 ms