RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 GAS8-AS1O95177 125 aa18.7■□□□□ 0.58
SSBP4-206ENST00000599699 CAMPP49913 170 aa18.7■□□□□ 0.58
SSBP4-206ENST00000599699 CLPSL2Q6UWE3 100 aa18.7■□□□□ 0.58
SSBP4-206ENST00000599699 BAALCQ8WXS3 180 aa18.7■□□□□ 0.58
SSBP4-206ENST00000599699 ST20Q9HBF5 79 aa18.7■□□□□ 0.58
SSBP4-206ENST00000599699 LRP1BQ9NZR2 4599 aa18.7■□□□□ 0.58
SSBP4-206ENST00000599699 PMCHP20382 165 aa18.69■□□□□ 0.58
SSBP4-206ENST00000599699 LINC00269Q8N2A0 174 aa18.69■□□□□ 0.58
SSBP4-206ENST00000599699 MAPKAPK5-AS1Q8N8E1 139 aa18.69■□□□□ 0.58
SSBP4-206ENST00000599699 IGLV5-52A0A0A0MRZ9 124 aa18.68■□□□□ 0.58
SSBP4-206ENST00000599699 TRBV6-5A0A0K0K1A5 114 aa18.68■□□□□ 0.58
SSBP4-206ENST00000599699 PPP1R2P9O14990 202 aa18.68■□□□□ 0.58
SSBP4-206ENST00000599699 PNRC1Q12796 327 aaPredicted RBP18.68■□□□□ 0.58
SSBP4-206ENST00000599699 WFDC2Q14508 124 aa18.68■□□□□ 0.58
SSBP4-206ENST00000599699 A0A1B0GW15 77 aa18.67■□□□□ 0.58
SSBP4-206ENST00000599699 CDK2AP2O75956 126 aa18.67■□□□□ 0.58
SSBP4-206ENST00000599699 NCR2O95944 276 aa18.67■□□□□ 0.58
SSBP4-206ENST00000599699 NTN5Q8WTR8 489 aaPredicted RBP18.67■□□□□ 0.58
SSBP4-206ENST00000599699 DNAH5Q8TE73 4624 aa18.66■□□□□ 0.58
SSBP4-206ENST00000599699 SMKR1H3BMG3 65 aa18.66■□□□□ 0.58
SSBP4-206ENST00000599699 I3L3M4 83 aa18.66■□□□□ 0.58
SSBP4-206ENST00000599699 APCSP02743 223 aa18.66■□□□□ 0.58
SSBP4-206ENST00000599699 MIAQ16674 131 aa18.66■□□□□ 0.58
SSBP4-206ENST00000599699 MRPL54Q6P161 138 aaKnown RBP18.66■□□□□ 0.58
SSBP4-206ENST00000599699 RPS10P46783 165 aaKnown RBP18.65■□□□□ 0.58
SSBP4-206ENST00000599699 A0A1B0GUV1 79 aa18.64■□□□□ 0.57
SSBP4-206ENST00000599699 MT-ND4LP03901 98 aa18.64■□□□□ 0.57
SSBP4-206ENST00000599699 S100A8P05109 93 aa18.64■□□□□ 0.57
SSBP4-206ENST00000599699 GCSHP23434 173 aa18.64■□□□□ 0.57
SSBP4-206ENST00000599699 FAM104BQ5XKR9 115 aa18.64■□□□□ 0.57
SSBP4-206ENST00000599699 TMEM70Q9BUB7 260 aa18.64■□□□□ 0.57
SSBP4-206ENST00000599699 PRR34Q9NV39 138 aa18.64■□□□□ 0.57
SSBP4-206ENST00000599699 IGLV4-60A0A075B6I1 120 aa18.63■□□□□ 0.57
SSBP4-206ENST00000599699 HBBP68871 147 aa18.63■□□□□ 0.57
SSBP4-206ENST00000599699 C20orf203Q8NBC4 194 aa18.63■□□□□ 0.57
SSBP4-206ENST00000599699 PPP1R17O96001 155 aa18.62■□□□□ 0.57
SSBP4-206ENST00000599699 REG3AQ06141 175 aa18.62■□□□□ 0.57
SSBP4-206ENST00000599699 MRPL51Q4U2R6 128 aaKnown RBP18.62■□□□□ 0.57
SSBP4-206ENST00000599699 AMMECR1LQ6DCA0 310 aa18.62■□□□□ 0.57
SSBP4-206ENST00000599699 UQCC3Q6UW78 93 aa18.62■□□□□ 0.57
SSBP4-206ENST00000599699 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.61■□□□□ 0.57
SSBP4-206ENST00000599699 IGKV2-29A2NJV5 120 aaPredicted RBP18.61■□□□□ 0.57
SSBP4-206ENST00000599699 TMEM242Q9NWH2 141 aa18.61■□□□□ 0.57
SSBP4-206ENST00000599699 RYR1P21817 5038 aa18.6■□□□□ 0.57
SSBP4-206ENST00000599699 IGLV2-33A0A075B6J2 118 aaPredicted RBP18.6■□□□□ 0.57
SSBP4-206ENST00000599699 F8W036 122 aa18.6■□□□□ 0.57
SSBP4-206ENST00000599699 HLA-DQA1P01909 254 aa18.6■□□□□ 0.57
SSBP4-206ENST00000599699 KRTAP10-1P60331 282 aa18.6■□□□□ 0.57
SSBP4-206ENST00000599699 ANAPC16Q96DE5 110 aa18.6■□□□□ 0.57
SSBP4-206ENST00000599699 TSHBP01222 138 aa18.58■□□□□ 0.56
SSBP4-206ENST00000599699 CKS2P33552 79 aa18.58■□□□□ 0.56
SSBP4-206ENST00000599699 POLR2KP53803 58 aaKnown RBP18.58■□□□□ 0.56
SSBP4-206ENST00000599699 RNASEKQ6P5S7 137 aaKnown RBP18.58■□□□□ 0.56
SSBP4-206ENST00000599699 IGLV10-54A0A075B6I4 117 aa18.57■□□□□ 0.56
SSBP4-206ENST00000599699 A0A1B0GXF2 115 aa18.57■□□□□ 0.56
SSBP4-206ENST00000599699 H7C423 109 aa18.57■□□□□ 0.56
SSBP4-206ENST00000599699 NRACQ8N912 160 aa18.57■□□□□ 0.56
SSBP4-206ENST00000599699 TRBV27A0A0K0K1C4 114 aa18.56■□□□□ 0.56
SSBP4-206ENST00000599699 TMEM218A2RU14 115 aa18.56■□□□□ 0.56
SSBP4-206ENST00000599699 VCYO14598 125 aa18.56■□□□□ 0.56
SSBP4-206ENST00000599699 SUMO2P61956 95 aaKnown RBP18.56■□□□□ 0.56
SSBP4-206ENST00000599699 ATP5L2Q7Z4Y8 100 aa18.56■□□□□ 0.56
SSBP4-206ENST00000599699 LINC00862A6NCI5 91 aa18.55■□□□□ 0.56
SSBP4-206ENST00000599699 FGF6P10767 208 aa18.55■□□□□ 0.56
SSBP4-206ENST00000599699 FCER1GP30273 86 aa18.55■□□□□ 0.56
SSBP4-206ENST00000599699 COMMD7Q86VX2 200 aa18.55■□□□□ 0.56
SSBP4-206ENST00000599699 TRAV8-4A0A0B4J246 113 aa18.54■□□□□ 0.56
SSBP4-206ENST00000599699 IGKV3OR2-268A0A0C4DH90 116 aa18.53■□□□□ 0.56
SSBP4-206ENST00000599699 C14orf177Q52M58 125 aa18.53■□□□□ 0.56
SSBP4-206ENST00000599699 BTF3L4Q96K17 158 aa18.53■□□□□ 0.56
SSBP4-206ENST00000599699 ADCYAP1P18509 176 aa18.52■□□□□ 0.56
SSBP4-206ENST00000599699 TMEM101Q96IK0 257 aa18.52■□□□□ 0.56
SSBP4-206ENST00000599699 KIR2DL4Q99706 377 aa18.52■□□□□ 0.56
SSBP4-206ENST00000599699 APOBP04114 4563 aaKnown RBP18.52■□□□□ 0.56
SSBP4-206ENST00000599699 HSPG2P98160 4391 aa18.52■□□□□ 0.55
SSBP4-206ENST00000599699 D6R8Y8 96 aa18.51■□□□□ 0.55
SSBP4-206ENST00000599699 USP17L23D6RBM5 183 aa18.51■□□□□ 0.55
SSBP4-206ENST00000599699 ESDP10768 282 aa18.51■□□□□ 0.55
SSBP4-206ENST00000599699 ZNF25P17030 456 aaPredicted RBP18.5■□□□□ 0.55
SSBP4-206ENST00000599699 C20orf78Q9BR46 151 aa18.5■□□□□ 0.55
SSBP4-206ENST00000599699 C7orf77A4D0Y5 90 aa18.49■□□□□ 0.55
SSBP4-206ENST00000599699 TNFRSF6BO95407 300 aa18.49■□□□□ 0.55
SSBP4-206ENST00000599699 KRTAP26-1Q6PEX3 210 aa18.49■□□□□ 0.55
SSBP4-206ENST00000599699 OR5A1Q8NGJ0 315 aa18.48■□□□□ 0.55
SSBP4-206ENST00000599699 TRBV24-1A0A075B6N3 115 aa18.47■□□□□ 0.55
SSBP4-206ENST00000599699 PPBPP02775 128 aa18.47■□□□□ 0.55
SSBP4-206ENST00000599699 SEC11CQ9BY50 192 aa18.47■□□□□ 0.55
SSBP4-206ENST00000599699 ORMDL3Q8N138 153 aa18.45■□□□□ 0.54
SSBP4-206ENST00000599699 NPYP01303 97 aa18.44■□□□□ 0.54
SSBP4-206ENST00000599699 XGP55808 180 aa18.44■□□□□ 0.54
SSBP4-206ENST00000599699 TMEM136Q6ZRR5 245 aa18.44■□□□□ 0.54
SSBP4-206ENST00000599699 KRTAP17-1Q9BYP8 105 aa18.44■□□□□ 0.54
SSBP4-206ENST00000599699 RPL32P62910 135 aaKnown RBP18.43■□□□□ 0.54
SSBP4-206ENST00000599699 LINC01620Q4KN68 170 aa18.43■□□□□ 0.54
SSBP4-206ENST00000599699 DGAT2L7PQ6IED9 249 aa18.43■□□□□ 0.54
SSBP4-206ENST00000599699 CTDSP1Q9GZU7 261 aa18.43■□□□□ 0.54
SSBP4-206ENST00000599699 GAGE12HA6NDE8 117 aa18.42■□□□□ 0.54
SSBP4-206ENST00000599699 PHOX2AO14813 284 aa18.42■□□□□ 0.54
SSBP4-206ENST00000599699 MRPL52Q86TS9 123 aaKnown RBP18.42■□□□□ 0.54
SSBP4-206ENST00000599699 PRELID3AQ96N28 172 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms