RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 F2Z2F3 143 aa6.69□□□□□ -1.34
CHMP2A-202ENST00000596708 PHOX2AO14813 284 aa6.69□□□□□ -1.34
CHMP2A-202ENST00000596708 AMTP48728 403 aa6.69□□□□□ -1.34
CHMP2A-202ENST00000596708 EIF5AP63241 154 aaKnown RBP6.69□□□□□ -1.34
CHMP2A-202ENST00000596708 COX6A2Q02221 97 aa6.69□□□□□ -1.34
CHMP2A-202ENST00000596708 LYZL1Q6UWQ5 148 aa6.69□□□□□ -1.34
CHMP2A-202ENST00000596708 PGLYRP4Q96LB8 373 aa6.69□□□□□ -1.34
CHMP2A-202ENST00000596708 MANBALQ9NQG1 85 aa6.69□□□□□ -1.34
CHMP2A-202ENST00000596708 RAB19A4D1S5 217 aa6.68□□□□□ -1.34
CHMP2A-202ENST00000596708 C19orf71A6NCJ1 209 aa6.68□□□□□ -1.34
CHMP2A-202ENST00000596708 BCL2L11O43521 198 aa6.68□□□□□ -1.34
CHMP2A-202ENST00000596708 IFNA1P01562 189 aa6.68□□□□□ -1.34
CHMP2A-202ENST00000596708 NTF3P20783 257 aa6.68□□□□□ -1.34
CHMP2A-202ENST00000596708 RPS10P46783 165 aaKnown RBP6.68□□□□□ -1.34
CHMP2A-202ENST00000596708 GNG4P50150 75 aa6.68□□□□□ -1.34
CHMP2A-202ENST00000596708 CCL20P78556 96 aa6.68□□□□□ -1.34
CHMP2A-202ENST00000596708 RGS21Q2M5E4 152 aa6.68□□□□□ -1.34
CHMP2A-202ENST00000596708 MAJINQ3KP22 176 aa6.68□□□□□ -1.34
CHMP2A-202ENST00000596708 HIGD2BQ4VC39 106 aa6.68□□□□□ -1.34
CHMP2A-202ENST00000596708 GTSF1Q8WW33 167 aa6.68□□□□□ -1.34
CHMP2A-202ENST00000596708 C11orf52Q96A22 123 aa6.68□□□□□ -1.34
CHMP2A-202ENST00000596708 PLAC8Q9NZF1 115 aa6.68□□□□□ -1.34
CHMP2A-202ENST00000596708 IGKV2-24A0A0C4DH68 120 aa6.67□□□□□ -1.34
CHMP2A-202ENST00000596708 HMSDA8MTL9 139 aa6.67□□□□□ -1.34
CHMP2A-202ENST00000596708 NDUFS6O75380 124 aaKnown RBP6.67□□□□□ -1.34
CHMP2A-202ENST00000596708 AMMECR1LQ6DCA0 310 aa6.67□□□□□ -1.34
CHMP2A-202ENST00000596708 C15orf56Q8N910 161 aa6.67□□□□□ -1.34
CHMP2A-202ENST00000596708 PRSS3P2Q8NHM4 247 aa6.67□□□□□ -1.34
CHMP2A-202ENST00000596708 TEX46H3BTG2 121 aa6.66□□□□□ -1.34
CHMP2A-202ENST00000596708 TWIST1Q15672 202 aa6.66□□□□□ -1.34
CHMP2A-202ENST00000596708 RNASEKQ6P5S7 137 aaKnown RBP6.66□□□□□ -1.34
CHMP2A-202ENST00000596708 STPG4Q8N801 248 aa6.66□□□□□ -1.34
CHMP2A-202ENST00000596708 LYPD6BQ8NI32 183 aa6.66□□□□□ -1.34
CHMP2A-202ENST00000596708 CHCHD10Q8WYQ3 142 aaPredicted RBP6.66□□□□□ -1.34
CHMP2A-202ENST00000596708 SMIM12Q96EX1 92 aa6.66□□□□□ -1.34
CHMP2A-202ENST00000596708 BIN3Q9NQY0 253 aa6.66□□□□□ -1.34
CHMP2A-202ENST00000596708 MED9Q9NWA0 146 aa6.66□□□□□ -1.34
CHMP2A-202ENST00000596708 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.64□□□□□ -1.35
CHMP2A-202ENST00000596708 TRAV1-1A0A0B4J248 108 aa6.64□□□□□ -1.35
CHMP2A-202ENST00000596708 TRAV26-2A0A0B4J265 109 aa6.64□□□□□ -1.35
CHMP2A-202ENST00000596708 IGKV2-29A2NJV5 120 aaPredicted RBP6.64□□□□□ -1.35
CHMP2A-202ENST00000596708 C9orf62Q8N4C0 152 aa6.64□□□□□ -1.35
CHMP2A-202ENST00000596708 GATD1Q8NB37 220 aa6.64□□□□□ -1.35
CHMP2A-202ENST00000596708 NUDT10Q8NFP7 164 aa6.64□□□□□ -1.35
CHMP2A-202ENST00000596708 NUDT11Q96G61 164 aa6.64□□□□□ -1.35
CHMP2A-202ENST00000596708 TNXBP22105 4242 aa6.63□□□□□ -1.35
CHMP2A-202ENST00000596708 PDE6DO43924 150 aa6.63□□□□□ -1.35
CHMP2A-202ENST00000596708 APCSP02743 223 aa6.63□□□□□ -1.35
CHMP2A-202ENST00000596708 MEF2BQ02080 365 aaPredicted RBP6.63□□□□□ -1.35
CHMP2A-202ENST00000596708 Q6ZNX1 250 aa6.63□□□□□ -1.35
CHMP2A-202ENST00000596708 SMIM15Q7Z3B0 74 aa6.63□□□□□ -1.35
CHMP2A-202ENST00000596708 RPL39LQ96EH5 51 aaKnown RBP6.63□□□□□ -1.35
CHMP2A-202ENST00000596708 LINC01600Q96MT4 127 aa6.63□□□□□ -1.35
CHMP2A-202ENST00000596708 TRBV20OR9-2A0A075B6H5 130 aa6.62□□□□□ -1.35
CHMP2A-202ENST00000596708 A0A096LNI7 61 aa6.62□□□□□ -1.35
CHMP2A-202ENST00000596708 H7C423 109 aa6.62□□□□□ -1.35
CHMP2A-202ENST00000596708 NCR2O95944 276 aa6.62□□□□□ -1.35
CHMP2A-202ENST00000596708 FGF6P10767 208 aa6.62□□□□□ -1.35
CHMP2A-202ENST00000596708 CTRLP40313 264 aa6.62□□□□□ -1.35
CHMP2A-202ENST00000596708 PRR3P79522 188 aaKnown RBP6.62□□□□□ -1.35
CHMP2A-202ENST00000596708 EIF5AL1Q6IS14 154 aaKnown RBP6.62□□□□□ -1.35
CHMP2A-202ENST00000596708 GVQW2A0A096LPI5 108 aaPredicted RBP6.61□□□□□ -1.35
CHMP2A-202ENST00000596708 PMCHP20382 165 aa6.61□□□□□ -1.35
CHMP2A-202ENST00000596708 ODF1Q14990 250 aa6.61□□□□□ -1.35
CHMP2A-202ENST00000596708 OR5A1Q8NGJ0 315 aa6.61□□□□□ -1.35
CHMP2A-202ENST00000596708 TMEM101Q96IK0 257 aa6.61□□□□□ -1.35
CHMP2A-202ENST00000596708 BTF3L4Q96K17 158 aa6.61□□□□□ -1.35
CHMP2A-202ENST00000596708 RNASE7Q9H1E1 156 aaKnown RBP6.61□□□□□ -1.35
CHMP2A-202ENST00000596708 RPP21Q9H633 154 aaKnown RBP6.61□□□□□ -1.35
CHMP2A-202ENST00000596708 LRP2P98164 4655 aa6.61□□□□□ -1.35
CHMP2A-202ENST00000596708 SDHAF1A6NFY7 115 aa6.6□□□□□ -1.35
CHMP2A-202ENST00000596708 BCL2P10415 239 aa6.6□□□□□ -1.35
CHMP2A-202ENST00000596708 XCL1P47992 114 aa6.6□□□□□ -1.35
CHMP2A-202ENST00000596708 FOXI1Q12951 378 aa6.6□□□□□ -1.35
CHMP2A-202ENST00000596708 REG3GQ6UW15 175 aa6.6□□□□□ -1.35
CHMP2A-202ENST00000596708 TEX261Q6UWH6 196 aa6.6□□□□□ -1.35
CHMP2A-202ENST00000596708 SPINK6Q6UWN8 80 aa6.6□□□□□ -1.35
CHMP2A-202ENST00000596708 LINC00526Q96FQ7 95 aa6.6□□□□□ -1.35
CHMP2A-202ENST00000596708 CNFNQ9BYD5 112 aa6.6□□□□□ -1.35
CHMP2A-202ENST00000596708 LINC00474Q9P2X8 69 aa6.6□□□□□ -1.35
CHMP2A-202ENST00000596708 PKIGQ9Y2B9 76 aa6.6□□□□□ -1.35
CHMP2A-202ENST00000596708 IGHV1-58A0A0C4DH39 117 aa6.59□□□□□ -1.35
CHMP2A-202ENST00000596708 A0A0J9YXV3 536 aa6.59□□□□□ -1.35
CHMP2A-202ENST00000596708 I3L3M4 83 aa6.59□□□□□ -1.35
CHMP2A-202ENST00000596708 CCL25O15444 150 aa6.59□□□□□ -1.35
CHMP2A-202ENST00000596708 ZNF25P17030 456 aaPredicted RBP6.59□□□□□ -1.35
CHMP2A-202ENST00000596708 FOXA3P55318 350 aaPredicted RBP6.59□□□□□ -1.35
CHMP2A-202ENST00000596708 OCC1Q8TAD7 63 aa6.59□□□□□ -1.35
CHMP2A-202ENST00000596708 LINC00959A0A1B0GUT2 108 aa6.58□□□□□ -1.36
CHMP2A-202ENST00000596708 ZNF561-AS1K7EIQ3 104 aa6.58□□□□□ -1.36
CHMP2A-202ENST00000596708 GATCO43716 136 aaKnown RBP6.58□□□□□ -1.36
CHMP2A-202ENST00000596708 SS18Q15532 418 aa6.58□□□□□ -1.36
CHMP2A-202ENST00000596708 CARD19Q96LW7 228 aa6.58□□□□□ -1.36
CHMP2A-202ENST00000596708 FAM231BA6NCW3 169 aa6.57□□□□□ -1.36
CHMP2A-202ENST00000596708 K7EN84 100 aa6.57□□□□□ -1.36
CHMP2A-202ENST00000596708 TAGLN2P37802 199 aaKnown RBP6.57□□□□□ -1.36
CHMP2A-202ENST00000596708 Q6ZRP5 223 aa6.57□□□□□ -1.36
CHMP2A-202ENST00000596708 KRTAP10-8P60410 259 aa6.56□□□□□ -1.36
CHMP2A-202ENST00000596708 SYCNQ0VAF6 134 aa6.56□□□□□ -1.36
CHMP2A-202ENST00000596708 GAGE2BQ13066 116 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms