RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 GVQW2A0A096LPI5 108 aaPredicted RBP6.2□□□□□ -1.42
LIG1-209ENST00000596104 A0A1B0GV50 99 aa6.2□□□□□ -1.42
LIG1-209ENST00000596104 ARPC5O15511 151 aa6.2□□□□□ -1.42
LIG1-209ENST00000596104 PFDN1O60925 122 aa6.2□□□□□ -1.42
LIG1-209ENST00000596104 RPL35P42766 123 aaKnown RBP6.2□□□□□ -1.42
LIG1-209ENST00000596104 AMTP48728 403 aa6.2□□□□□ -1.42
LIG1-209ENST00000596104 CACNG7P62955 275 aa6.2□□□□□ -1.42
LIG1-209ENST00000596104 SRSF9Q13242 221 aaKnown RBP eCLIP6.2□□□□□ -1.42
LIG1-209ENST00000596104 COTL1Q14019 142 aa6.2□□□□□ -1.42
LIG1-209ENST00000596104 SPINK6Q6UWN8 80 aa6.2□□□□□ -1.42
LIG1-209ENST00000596104 LYPD6BQ8NI32 183 aa6.2□□□□□ -1.42
LIG1-209ENST00000596104 FAM213BQ8TBF2 198 aa6.2□□□□□ -1.42
LIG1-209ENST00000596104 C11orf52Q96A22 123 aa6.2□□□□□ -1.42
LIG1-209ENST00000596104 C19orf71A6NCJ1 209 aa6.19□□□□□ -1.42
LIG1-209ENST00000596104 UBE2L6O14933 153 aa6.19□□□□□ -1.42
LIG1-209ENST00000596104 RPS20P60866 119 aaKnown RBP6.19□□□□□ -1.42
LIG1-209ENST00000596104 REG3GQ6UW15 175 aa6.19□□□□□ -1.42
LIG1-209ENST00000596104 OR2D3Q8NGH3 330 aa6.19□□□□□ -1.42
LIG1-209ENST00000596104 CHCHD10Q8WYQ3 142 aaPredicted RBP6.19□□□□□ -1.42
LIG1-209ENST00000596104 IGKV3OR2-268A0A0C4DH90 116 aa6.18□□□□□ -1.42
LIG1-209ENST00000596104 UMAD1C9J7I0 102 aa6.18□□□□□ -1.42
LIG1-209ENST00000596104 GAS8-AS1O95177 125 aa6.18□□□□□ -1.42
LIG1-209ENST00000596104 TRGC1P0CF51 173 aa6.18□□□□□ -1.42
LIG1-209ENST00000596104 CENPWQ5EE01 88 aa6.18□□□□□ -1.42
LIG1-209ENST00000596104 KCNRGQ8N5I3 272 aa6.18□□□□□ -1.42
LIG1-209ENST00000596104 F2Z2F3 143 aa6.17□□□□□ -1.42
LIG1-209ENST00000596104 FOXI1Q12951 378 aa6.17□□□□□ -1.42
LIG1-209ENST00000596104 LYZL1Q6UWQ5 148 aa6.17□□□□□ -1.42
LIG1-209ENST00000596104 H2AFB1P0C5Y9 115 aa6.16□□□□□ -1.42
LIG1-209ENST00000596104 NTF3P20783 257 aa6.16□□□□□ -1.42
LIG1-209ENST00000596104 CCL20P78556 96 aa6.16□□□□□ -1.42
LIG1-209ENST00000596104 Q6ZNX1 250 aa6.16□□□□□ -1.42
LIG1-209ENST00000596104 Q6ZRP5 223 aa6.16□□□□□ -1.42
LIG1-209ENST00000596104 C9orf62Q8N4C0 152 aa6.16□□□□□ -1.42
LIG1-209ENST00000596104 GATD1Q8NB37 220 aa6.16□□□□□ -1.42
LIG1-209ENST00000596104 LINC00474Q9P2X8 69 aa6.16□□□□□ -1.42
LIG1-209ENST00000596104 TRBV20OR9-2A0A075B6H5 130 aa6.15□□□□□ -1.42
LIG1-209ENST00000596104 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.15□□□□□ -1.42
LIG1-209ENST00000596104 IGKV2-29A2NJV5 120 aaPredicted RBP6.15□□□□□ -1.42
LIG1-209ENST00000596104 XKRY2A2RUG3 117 aa6.15□□□□□ -1.42
LIG1-209ENST00000596104 SMLR1H3BR10 107 aa6.15□□□□□ -1.42
LIG1-209ENST00000596104 IFNA1P01562 189 aa6.15□□□□□ -1.42
LIG1-209ENST00000596104 FGF6P10767 208 aa6.15□□□□□ -1.42
LIG1-209ENST00000596104 CTRLP40313 264 aa6.15□□□□□ -1.42
LIG1-209ENST00000596104 ZNF345Q14585 488 aa6.15□□□□□ -1.42
LIG1-209ENST00000596104 AMMECR1LQ6DCA0 310 aa6.15□□□□□ -1.42
LIG1-209ENST00000596104 SMIM12Q96EX1 92 aa6.15□□□□□ -1.42
LIG1-209ENST00000596104 LINC00526Q96FQ7 95 aa6.15□□□□□ -1.42
LIG1-209ENST00000596104 CNFNQ9BYD5 112 aa6.15□□□□□ -1.42
LIG1-209ENST00000596104 GNG13Q9P2W3 67 aa6.15□□□□□ -1.42
LIG1-209ENST00000596104 TRAV26-2A0A0B4J265 109 aa6.14□□□□□ -1.43
LIG1-209ENST00000596104 RAB19A4D1S5 217 aa6.14□□□□□ -1.43
LIG1-209ENST00000596104 H7C423 109 aa6.14□□□□□ -1.43
LIG1-209ENST00000596104 NCR2O95944 276 aa6.14□□□□□ -1.43
LIG1-209ENST00000596104 RNASEKQ6P5S7 137 aaKnown RBP6.14□□□□□ -1.43
LIG1-209ENST00000596104 OR5A1Q8NGJ0 315 aa6.14□□□□□ -1.43
LIG1-209ENST00000596104 RPL39LQ96EH5 51 aaKnown RBP6.14□□□□□ -1.43
LIG1-209ENST00000596104 CARD19Q96LW7 228 aa6.14□□□□□ -1.43
LIG1-209ENST00000596104 MANBALQ9NQG1 85 aa6.14□□□□□ -1.43
LIG1-209ENST00000596104 PKIGQ9Y2B9 76 aa6.14□□□□□ -1.43
LIG1-209ENST00000596104 IGHV1-58A0A0C4DH39 117 aa6.13□□□□□ -1.43
LIG1-209ENST00000596104 XCL1P47992 114 aa6.13□□□□□ -1.43
LIG1-209ENST00000596104 GNG4P50150 75 aa6.13□□□□□ -1.43
LIG1-209ENST00000596104 TRAV1-1A0A0B4J248 108 aa6.12□□□□□ -1.43
LIG1-209ENST00000596104 LINC00959A0A1B0GUT2 108 aa6.12□□□□□ -1.43
LIG1-209ENST00000596104 FAM231BA6NCW3 169 aa6.12□□□□□ -1.43
LIG1-209ENST00000596104 CCL25O15444 150 aa6.12□□□□□ -1.43
LIG1-209ENST00000596104 APCSP02743 223 aa6.12□□□□□ -1.43
LIG1-209ENST00000596104 ZNF25P17030 456 aaPredicted RBP6.12□□□□□ -1.43
LIG1-209ENST00000596104 PTTG1IPP53801 180 aa6.12□□□□□ -1.43
LIG1-209ENST00000596104 SYCNQ0VAF6 134 aa6.12□□□□□ -1.43
LIG1-209ENST00000596104 TWIST1Q15672 202 aa6.12□□□□□ -1.43
LIG1-209ENST00000596104 NUDT10Q8NFP7 164 aa6.12□□□□□ -1.43
LIG1-209ENST00000596104 NUDT11Q96G61 164 aa6.12□□□□□ -1.43
LIG1-209ENST00000596104 A0A1W2PNN7 141 aa6.11□□□□□ -1.43
LIG1-209ENST00000596104 SDHAF1A6NFY7 115 aa6.11□□□□□ -1.43
LIG1-209ENST00000596104 HMSDA8MTL9 139 aa6.11□□□□□ -1.43
LIG1-209ENST00000596104 BCL2L11O43521 198 aa6.11□□□□□ -1.43
LIG1-209ENST00000596104 ESDP10768 282 aa6.11□□□□□ -1.43
LIG1-209ENST00000596104 LPAP08519 4548 aa6.1□□□□□ -1.43
LIG1-209ENST00000596104 KANTRA0A1W2PQU2 76 aa6.1□□□□□ -1.43
LIG1-209ENST00000596104 PDE6DO43924 150 aa6.1□□□□□ -1.43
LIG1-209ENST00000596104 FOXA3P55318 350 aaPredicted RBP6.1□□□□□ -1.43
LIG1-209ENST00000596104 MEF2BQ02080 365 aaPredicted RBP6.1□□□□□ -1.43
LIG1-209ENST00000596104 BIN3Q9NQY0 253 aa6.1□□□□□ -1.43
LIG1-209ENST00000596104 TRBV6-5A0A0K0K1A5 114 aa6.09□□□□□ -1.43
LIG1-209ENST00000596104 ZNF561-AS1K7EIQ3 104 aa6.09□□□□□ -1.43
LIG1-209ENST00000596104 CAMPP49913 170 aa6.09□□□□□ -1.43
LIG1-209ENST00000596104 EIF5AP63241 154 aaKnown RBP6.09□□□□□ -1.43
LIG1-209ENST00000596104 GAGE2BQ13066 116 aa6.09□□□□□ -1.43
LIG1-209ENST00000596104 CD164L2Q6UWJ8 174 aa6.09□□□□□ -1.43
LIG1-209ENST00000596104 BTF3L4Q96K17 158 aa6.09□□□□□ -1.43
LIG1-209ENST00000596104 RPP21Q9H633 154 aaKnown RBP6.09□□□□□ -1.43
LIG1-209ENST00000596104 MED9Q9NWA0 146 aa6.09□□□□□ -1.43
LIG1-209ENST00000596104 PSORS1C2Q9UIG4 136 aa6.09□□□□□ -1.43
LIG1-209ENST00000596104 LOC107984640A0A0U1RRK4 108 aa6.08□□□□□ -1.44
LIG1-209ENST00000596104 I3L3M4 83 aa6.08□□□□□ -1.44
LIG1-209ENST00000596104 K7EN84 100 aa6.08□□□□□ -1.44
LIG1-209ENST00000596104 TSHBP01222 138 aa6.08□□□□□ -1.44
LIG1-209ENST00000596104 PMCHP20382 165 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms