RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 H3BMM0 161 aa12.76□□□□□ -0.37
ARHGEF1-213ENST00000595897 UBE2WQ96B02 151 aa12.76□□□□□ -0.37
ARHGEF1-213ENST00000595897 CRLF1O75462 422 aa12.75□□□□□ -0.37
ARHGEF1-213ENST00000595897 SPTBN4Q9H254 2564 aa12.75□□□□□ -0.37
ARHGEF1-213ENST00000595897 AVPP01185 164 aa12.75□□□□□ -0.37
ARHGEF1-213ENST00000595897 IGHV4-59P01825 116 aa12.75□□□□□ -0.37
ARHGEF1-213ENST00000595897 TTC32Q5I0X7 151 aa12.74□□□□□ -0.37
ARHGEF1-213ENST00000595897 Q6ZSV7 163 aa12.74□□□□□ -0.37
ARHGEF1-213ENST00000595897 CRYBG3Q68DQ2 2970 aa12.73□□□□□ -0.37
ARHGEF1-213ENST00000595897 VSIG2Q96IQ7 327 aa12.73□□□□□ -0.37
ARHGEF1-213ENST00000595897 PRM2P04554 102 aa12.73□□□□□ -0.37
ARHGEF1-213ENST00000595897 RPL13AP40429 203 aaKnown RBP12.73□□□□□ -0.37
ARHGEF1-213ENST00000595897 GAGE5Q13069 117 aa12.73□□□□□ -0.37
ARHGEF1-213ENST00000595897 GAGE6Q13070 117 aa12.73□□□□□ -0.37
ARHGEF1-213ENST00000595897 MIAQ16674 131 aa12.73□□□□□ -0.37
ARHGEF1-213ENST00000595897 FAM104AQ969W3 186 aa12.73□□□□□ -0.37
ARHGEF1-213ENST00000595897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF1-213ENST00000595897 IGKV2-29A2NJV5 120 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF1-213ENST00000595897 RBMY1A1P0DJD3 496 aaKnown RBP12.72□□□□□ -0.37
ARHGEF1-213ENST00000595897 RBMY1CP0DJD4 496 aa12.72□□□□□ -0.37
ARHGEF1-213ENST00000595897 GNLYP22749 145 aa12.72□□□□□ -0.37
ARHGEF1-213ENST00000595897 RBMY1FQ15415 496 aaKnown RBP12.72□□□□□ -0.37
ARHGEF1-213ENST00000595897 CLEC2BQ92478 149 aa12.72□□□□□ -0.37
ARHGEF1-213ENST00000595897 DUX3Q96PT4 197 aa12.72□□□□□ -0.37
ARHGEF1-213ENST00000595897 SPANXDQ9BXN6 97 aa12.72□□□□□ -0.37
ARHGEF1-213ENST00000595897 SPANXCQ9NY87 97 aa12.72□□□□□ -0.37
ARHGEF1-213ENST00000595897 Q9UF83 564 aa12.72□□□□□ -0.37
ARHGEF1-213ENST00000595897 B5MCH6 92 aa12.71□□□□□ -0.37
ARHGEF1-213ENST00000595897 H7C423 109 aa12.71□□□□□ -0.37
ARHGEF1-213ENST00000595897 NDUFV3P56181 108 aaKnown RBP12.71□□□□□ -0.37
ARHGEF1-213ENST00000595897 C15orf53Q8NAA6 179 aa12.71□□□□□ -0.37
ARHGEF1-213ENST00000595897 SS18L2Q9UHA2 77 aa12.71□□□□□ -0.37
ARHGEF1-213ENST00000595897 TINCRA0A1B0GVN0 87 aa12.71□□□□□ -0.38
ARHGEF1-213ENST00000595897 DAND5Q8N907 189 aa12.71□□□□□ -0.38
ARHGEF1-213ENST00000595897 HOXD3P31249 432 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF1-213ENST00000595897 DEFB112Q30KQ8 113 aa12.7□□□□□ -0.38
ARHGEF1-213ENST00000595897 IGHV3-38A0A0C4DH36 116 aa12.69□□□□□ -0.38
ARHGEF1-213ENST00000595897 IFITM1P13164 125 aa12.69□□□□□ -0.38
ARHGEF1-213ENST00000595897 DEFB131AP59861 70 aa12.69□□□□□ -0.38
ARHGEF1-213ENST00000595897 YAE1D1Q9NRH1 226 aa12.69□□□□□ -0.38
ARHGEF1-213ENST00000595897 SPANXA1Q9NS26 97 aa12.69□□□□□ -0.38
ARHGEF1-213ENST00000595897 B4DSR2 109 aa12.69□□□□□ -0.38
ARHGEF1-213ENST00000595897 UBE2D4Q9Y2X8 147 aa12.69□□□□□ -0.38
ARHGEF1-213ENST00000595897 CELSR2Q9HCU4 2923 aa12.69□□□□□ -0.38
ARHGEF1-213ENST00000595897 NHLRC4P0CG21 123 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF1-213ENST00000595897 TMEM61Q8N0U2 210 aa12.68□□□□□ -0.38
ARHGEF1-213ENST00000595897 H3BT86 120 aa12.68□□□□□ -0.38
ARHGEF1-213ENST00000595897 Q6ZSN1 163 aa12.68□□□□□ -0.38
ARHGEF1-213ENST00000595897 CHCHD7Q9BUK0 85 aa12.68□□□□□ -0.38
ARHGEF1-213ENST00000595897 LINC00467Q9BRT7 94 aa12.67□□□□□ -0.38
ARHGEF1-213ENST00000595897 EDA2RQ9HAV5 297 aa12.67□□□□□ -0.38
ARHGEF1-213ENST00000595897 USP9YO00507 2555 aaPredicted RBP12.67□□□□□ -0.38
ARHGEF1-213ENST00000595897 DGAT2L7PQ6IED9 249 aa12.67□□□□□ -0.38
ARHGEF1-213ENST00000595897 LINC01600Q96MT4 127 aa12.66□□□□□ -0.38
ARHGEF1-213ENST00000595897 CDKN2A-AS1Q9UH64 79 aa12.66□□□□□ -0.38
ARHGEF1-213ENST00000595897 LST1O00453 97 aa12.65□□□□□ -0.38
ARHGEF1-213ENST00000595897 ZNF415Q09FC8 603 aa12.65□□□□□ -0.38
ARHGEF1-213ENST00000595897 TMEM89A2RUT3 159 aa12.65□□□□□ -0.38
ARHGEF1-213ENST00000595897 GAGE12JA6NER3 117 aa12.65□□□□□ -0.38
ARHGEF1-213ENST00000595897 GAGE7O76087 117 aa12.65□□□□□ -0.38
ARHGEF1-213ENST00000595897 GAGE12FP0CL80 117 aa12.65□□□□□ -0.38
ARHGEF1-213ENST00000595897 GAGE12GP0CL81 117 aa12.65□□□□□ -0.38
ARHGEF1-213ENST00000595897 GAGE12IP0CL82 117 aa12.65□□□□□ -0.38
ARHGEF1-213ENST00000595897 GAGE4Q13068 117 aa12.65□□□□□ -0.38
ARHGEF1-213ENST00000595897 CIRBPQ14011 172 aaKnown RBP12.64□□□□□ -0.39
ARHGEF1-213ENST00000595897 SVIPQ8NHG7 77 aa12.64□□□□□ -0.39
ARHGEF1-213ENST00000595897 A0A0U1RRA0 63 aa12.64□□□□□ -0.39
ARHGEF1-213ENST00000595897 RNF152Q8N8N0 203 aa12.63□□□□□ -0.39
ARHGEF1-213ENST00000595897 ZNF625Q96I27 306 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF1-213ENST00000595897 LINC01587Q99440 93 aa12.63□□□□□ -0.39
ARHGEF1-213ENST00000595897 Q6Q795 121 aa12.63□□□□□ -0.39
ARHGEF1-213ENST00000595897 DEFB136Q30KP8 78 aa12.62□□□□□ -0.39
ARHGEF1-213ENST00000595897 CCDC179H3BU77 68 aa12.62□□□□□ -0.39
ARHGEF1-213ENST00000595897 TMEM101Q96IK0 257 aa12.62□□□□□ -0.39
ARHGEF1-213ENST00000595897 RBMY1BA6NDE4 496 aaKnown RBP12.61□□□□□ -0.39
ARHGEF1-213ENST00000595897 RBMY1EA6NEQ0 496 aaKnown RBP12.61□□□□□ -0.39
ARHGEF1-213ENST00000595897 TIMM17BO60830 172 aa12.61□□□□□ -0.39
ARHGEF1-213ENST00000595897 RBMY1DP0C7P1 496 aaKnown RBP12.61□□□□□ -0.39
ARHGEF1-213ENST00000595897 SLURP1P55000 103 aa12.61□□□□□ -0.39
ARHGEF1-213ENST00000595897 UBE2E2Q96LR5 201 aa12.61□□□□□ -0.39
ARHGEF1-213ENST00000595897 NDUFA1O15239 70 aa12.6□□□□□ -0.39
ARHGEF1-213ENST00000595897 Q9H8V8 135 aa12.6□□□□□ -0.39
ARHGEF1-213ENST00000595897 NACAE9PAV3 2078 aa12.6□□□□□ -0.39
ARHGEF1-213ENST00000595897 ITPR1Q14643 2758 aa12.59□□□□□ -0.39
ARHGEF1-213ENST00000595897 IGHV3-53P01767 116 aa12.59□□□□□ -0.39
ARHGEF1-213ENST00000595897 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF1-213ENST00000595897 DNAJC30Q96LL9 226 aa12.58□□□□□ -0.4
ARHGEF1-213ENST00000595897 CITED2Q99967 270 aaPredicted RBP12.58□□□□□ -0.4
ARHGEF1-213ENST00000595897 TIRAPP58753 221 aa12.57□□□□□ -0.4
ARHGEF1-213ENST00000595897 COX6A2Q02221 97 aa12.57□□□□□ -0.4
ARHGEF1-213ENST00000595897 PIK3CD-AS1Q5SR53 167 aa12.57□□□□□ -0.4
ARHGEF1-213ENST00000595897 MAPK1IP1LQ8NDC0 245 aa12.57□□□□□ -0.4
ARHGEF1-213ENST00000595897 LINC00308Q8TCZ7 52 aa12.57□□□□□ -0.4
ARHGEF1-213ENST00000595897 NRGNQ92686 78 aa12.57□□□□□ -0.4
ARHGEF1-213ENST00000595897 NOTCH3Q9UM47 2321 aa12.57□□□□□ -0.4
ARHGEF1-213ENST00000595897 MYO9AB2RTY4 2548 aa12.57□□□□□ -0.4
ARHGEF1-213ENST00000595897 FAM240AA0A1B0GVK7 77 aa12.57□□□□□ -0.4
ARHGEF1-213ENST00000595897 C18orf65Q6ZTR6 163 aa12.57□□□□□ -0.4
ARHGEF1-213ENST00000595897 C2CD3Q4AC94 2353 aa12.57□□□□□ -0.4
ARHGEF1-213ENST00000595897 VPREB3Q9UKI3 123 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms