RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.49□□□□□ -1.21
VPS25-203ENST00000589520 KIR2DL5BQ8NHK3 375 aa7.49□□□□□ -1.21
VPS25-203ENST00000589520 MEGF8Q7Z7M0 2845 aa7.48□□□□□ -1.21
VPS25-203ENST00000589520 IGHV3-73A0A0B4J1V6 119 aa7.48□□□□□ -1.21
VPS25-203ENST00000589520 HINT1P49773 126 aaPredicted RBP7.48□□□□□ -1.21
VPS25-203ENST00000589520 RPL36AP83881 106 aaKnown RBP7.48□□□□□ -1.21
VPS25-203ENST00000589520 HSD52Q0P140 79 aa7.48□□□□□ -1.21
VPS25-203ENST00000589520 COTL1Q14019 142 aa7.48□□□□□ -1.21
VPS25-203ENST00000589520 BVES-AS1Q5T3Y7 98 aa7.48□□□□□ -1.21
VPS25-203ENST00000589520 DAZ4Q86SG3 579 aaKnown RBP7.48□□□□□ -1.21
VPS25-203ENST00000589520 RPL36ALQ969Q0 106 aaKnown RBP7.48□□□□□ -1.21
VPS25-203ENST00000589520 VCX2Q9H322 139 aa7.48□□□□□ -1.21
VPS25-203ENST00000589520 DAZ3Q9NR90 486 aaKnown RBP7.48□□□□□ -1.21
VPS25-203ENST00000589520 SPANXA1Q9NS26 97 aa7.48□□□□□ -1.21
VPS25-203ENST00000589520 NOTCH1P46531 2555 aa7.47□□□□□ -1.21
VPS25-203ENST00000589520 TRBV7-3A0A075B6L6 115 aa7.47□□□□□ -1.21
VPS25-203ENST00000589520 TRBV6-4A0A1B0GX49 114 aa7.47□□□□□ -1.21
VPS25-203ENST00000589520 C11orf86A6NJI1 115 aa7.47□□□□□ -1.21
VPS25-203ENST00000589520 E9PLD3 99 aa7.47□□□□□ -1.21
VPS25-203ENST00000589520 K7EQD1 137 aa7.47□□□□□ -1.21
VPS25-203ENST00000589520 PRM2P04554 102 aa7.47□□□□□ -1.21
VPS25-203ENST00000589520 APOC4P55056 127 aa7.47□□□□□ -1.21
VPS25-203ENST00000589520 TAL2Q16559 108 aa7.47□□□□□ -1.21
VPS25-203ENST00000589520 MPV17L2Q567V2 206 aa7.47□□□□□ -1.21
VPS25-203ENST00000589520 C2orf91Q6ZV80 131 aa7.47□□□□□ -1.21
VPS25-203ENST00000589520 NFE4Q86UQ8 179 aa7.47□□□□□ -1.21
VPS25-203ENST00000589520 OR11H2Q8NH07 326 aa7.47□□□□□ -1.21
VPS25-203ENST00000589520 TIMM21Q9BVV7 248 aa7.47□□□□□ -1.21
VPS25-203ENST00000589520 RPL39P62891 51 aaKnown RBP7.46□□□□□ -1.22
VPS25-203ENST00000589520 NOP10Q9NPE3 64 aaKnown RBP7.46□□□□□ -1.22
VPS25-203ENST00000589520 ZMAT5Q9UDW3 170 aaKnown RBP7.46□□□□□ -1.22
VPS25-203ENST00000589520 TRGV2A0A075B6R0 118 aa7.45□□□□□ -1.22
VPS25-203ENST00000589520 PLAC8L1A1L4L8 177 aa7.45□□□□□ -1.22
VPS25-203ENST00000589520 A6NDN8 102 aa7.45□□□□□ -1.22
VPS25-203ENST00000589520 Q6ZSN1 163 aa7.45□□□□□ -1.22
VPS25-203ENST00000589520 Q6ZTI0 123 aa7.45□□□□□ -1.22
VPS25-203ENST00000589520 PCP2Q8IVA1 136 aa7.45□□□□□ -1.22
VPS25-203ENST00000589520 AMELXQ99217 191 aa7.45□□□□□ -1.22
VPS25-203ENST00000589520 WFDC10AQ9H1F0 79 aa7.45□□□□□ -1.22
VPS25-203ENST00000589520 GTSF1LQ9H1H1 148 aa7.45□□□□□ -1.22
VPS25-203ENST00000589520 IGLV4-69A0A075B6H9 119 aa7.44□□□□□ -1.22
VPS25-203ENST00000589520 IGLV4-3A0A075B6K6 122 aa7.44□□□□□ -1.22
VPS25-203ENST00000589520 MYMXA0A1B0GTQ4 84 aa7.44□□□□□ -1.22
VPS25-203ENST00000589520 H7C423 109 aa7.44□□□□□ -1.22
VPS25-203ENST00000589520 MRPS36P82909 103 aaKnown RBP7.44□□□□□ -1.22
VPS25-203ENST00000589520 GAGE1Q13065 139 aa7.44□□□□□ -1.22
VPS25-203ENST00000589520 LINC00612Q8N6U2 182 aa7.44□□□□□ -1.22
VPS25-203ENST00000589520 ZNRF2Q8NHG8 242 aa7.44□□□□□ -1.22
VPS25-203ENST00000589520 ORAOV1Q8WV07 137 aa7.44□□□□□ -1.22
VPS25-203ENST00000589520 ZNF479Q96JC4 524 aa7.44□□□□□ -1.22
VPS25-203ENST00000589520 PRADC1Q9BSG0 188 aa7.44□□□□□ -1.22
VPS25-203ENST00000589520 CHCHD7Q9BUK0 85 aa7.44□□□□□ -1.22
VPS25-203ENST00000589520 CSDC2Q9Y534 153 aaKnown RBP7.44□□□□□ -1.22
VPS25-203ENST00000589520 NBEAL2Q6ZNJ1 2754 aa7.43□□□□□ -1.22
VPS25-203ENST00000589520 TRBV25-1A0A075B6N4 114 aa7.43□□□□□ -1.22
VPS25-203ENST00000589520 IGKV2D-26A0A0A0MRZ7 120 aa7.43□□□□□ -1.22
VPS25-203ENST00000589520 UBE2D4Q9Y2X8 147 aa7.43□□□□□ -1.22
VPS25-203ENST00000589520 TRAV8-6A0A0B4J262 113 aa7.42□□□□□ -1.22
VPS25-203ENST00000589520 TRGV4A0A0C4DH28 118 aa7.42□□□□□ -1.22
VPS25-203ENST00000589520 GAGE12BA1L429 117 aa7.42□□□□□ -1.22
VPS25-203ENST00000589520 LYRM9A8MSI8 78 aa7.42□□□□□ -1.22
VPS25-203ENST00000589520 GAGE7O76087 117 aa7.42□□□□□ -1.22
VPS25-203ENST00000589520 GAGE12FP0CL80 117 aa7.42□□□□□ -1.22
VPS25-203ENST00000589520 GAGE12GP0CL81 117 aa7.42□□□□□ -1.22
VPS25-203ENST00000589520 GAGE12IP0CL82 117 aa7.42□□□□□ -1.22
VPS25-203ENST00000589520 UBE2D3P61077 147 aa7.42□□□□□ -1.22
VPS25-203ENST00000589520 UBE2D2P62837 147 aa7.42□□□□□ -1.22
VPS25-203ENST00000589520 SLC25A29Q8N8R3 303 aa7.42□□□□□ -1.22
VPS25-203ENST00000589520 ANK2Q01484 3957 aa7.41□□□□□ -1.22
VPS25-203ENST00000589520 TINCRA0A1B0GVN0 87 aa7.41□□□□□ -1.22
VPS25-203ENST00000589520 H3BRM9 83 aa7.41□□□□□ -1.22
VPS25-203ENST00000589520 TMEM170BQ5T4T1 132 aa7.41□□□□□ -1.22
VPS25-203ENST00000589520 DGAT2L7PQ6IED9 249 aa7.41□□□□□ -1.22
VPS25-203ENST00000589520 PLEKHB2Q96CS7 222 aa7.41□□□□□ -1.22
VPS25-203ENST00000589520 CHAC1Q9BUX1 264 aa7.41□□□□□ -1.22
VPS25-203ENST00000589520 TM2D2Q9BX73 214 aa7.41□□□□□ -1.22
VPS25-203ENST00000589520 COX11Q9Y6N1 276 aa7.41□□□□□ -1.22
VPS25-203ENST00000589520 LEPROTO15243 131 aa7.4□□□□□ -1.22
VPS25-203ENST00000589520 ZNF25P17030 456 aaPredicted RBP7.4□□□□□ -1.22
VPS25-203ENST00000589520 FHL2Q14192 279 aa7.4□□□□□ -1.22
VPS25-203ENST00000589520 SHISA2Q6UWI4 295 aa7.4□□□□□ -1.22
VPS25-203ENST00000589520 PHLDA1Q8WV24 401 aaPredicted RBP7.4□□□□□ -1.22
VPS25-203ENST00000589520 X6R8D5 127 aa7.4□□□□□ -1.22
VPS25-203ENST00000589520 WNK1Q9H4A3 2382 aa7.39□□□□□ -1.23
VPS25-203ENST00000589520 TMEM223A0PJW6 202 aa7.39□□□□□ -1.23
VPS25-203ENST00000589520 GAGE12JA6NER3 117 aa7.39□□□□□ -1.23
VPS25-203ENST00000589520 MIFP14174 115 aa7.39□□□□□ -1.23
VPS25-203ENST00000589520 LGALS3P17931 250 aaKnown RBP7.39□□□□□ -1.23
VPS25-203ENST00000589520 TIRAPP58753 221 aa7.39□□□□□ -1.23
VPS25-203ENST00000589520 GAGE4Q13068 117 aa7.39□□□□□ -1.23
VPS25-203ENST00000589520 GAGE5Q13069 117 aa7.39□□□□□ -1.23
VPS25-203ENST00000589520 GAGE13Q4V321 117 aa7.39□□□□□ -1.23
VPS25-203ENST00000589520 FAM19A3Q7Z5A8 133 aa7.39□□□□□ -1.23
VPS25-203ENST00000589520 CEND1Q8N111 149 aa7.39□□□□□ -1.23
VPS25-203ENST00000589520 MAPKAPK5-AS1Q8N8E1 139 aa7.39□□□□□ -1.23
VPS25-203ENST00000589520 ZNF815PA8K554 130 aa7.38□□□□□ -1.23
VPS25-203ENST00000589520 A8MZ25 164 aa7.38□□□□□ -1.23
VPS25-203ENST00000589520 TAX1BP3O14907 124 aa7.38□□□□□ -1.23
VPS25-203ENST00000589520 SMIM13P0DJ93 91 aa7.38□□□□□ -1.23
VPS25-203ENST00000589520 ZNF22P17026 224 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms