RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 PPDPFLQ8WWR9 84 aa0.4□□□□□ -2.35
SMAD4-207ENST00000589076 TRRAPQ9Y4A5 3859 aa0.39□□□□□ -2.35
SMAD4-207ENST00000589076 PLECQ15149 4684 aaKnown RBP0.39□□□□□ -2.35
SMAD4-207ENST00000589076 SMIM24O75264 130 aa0.39□□□□□ -2.35
SMAD4-207ENST00000589076 TNFSF15O95150 251 aa0.39□□□□□ -2.35
SMAD4-207ENST00000589076 MT-ND4LP03901 98 aa0.39□□□□□ -2.35
SMAD4-207ENST00000589076 CD3DP04234 171 aa0.39□□□□□ -2.35
SMAD4-207ENST00000589076 DR1Q01658 176 aa0.39□□□□□ -2.35
SMAD4-207ENST00000589076 BANF2Q9H503 90 aa0.39□□□□□ -2.35
SMAD4-207ENST00000589076 TAS2R8Q9NYW2 309 aa0.39□□□□□ -2.35
SMAD4-207ENST00000589076 ANKRD30AQ9BXX3 1397 aa0.39□□□□□ -2.35
SMAD4-207ENST00000589076 UHRF1BP1LA0JNW5 1464 aa0.39□□□□□ -2.35
SMAD4-207ENST00000589076 PKHD1L1Q86WI1 4243 aa0.39□□□□□ -2.35
SMAD4-207ENST00000589076 CCDC171Q6TFL3 1326 aa0.38□□□□□ -2.35
SMAD4-207ENST00000589076 MAP3K4Q9Y6R4 1608 aa0.38□□□□□ -2.35
SMAD4-207ENST00000589076 DIP2AQ14689 1571 aa0.38□□□□□ -2.35
SMAD4-207ENST00000589076 CPDO75976 1380 aa0.38□□□□□ -2.35
SMAD4-207ENST00000589076 TRAV2A0A0B4J234 112 aa0.38□□□□□ -2.35
SMAD4-207ENST00000589076 C9JAW5 83 aa0.38□□□□□ -2.35
SMAD4-207ENST00000589076 OR2H2O95918 312 aa0.38□□□□□ -2.35
SMAD4-207ENST00000589076 CCKP06307 115 aa0.38□□□□□ -2.35
SMAD4-207ENST00000589076 CMPK1P30085 196 aa0.38□□□□□ -2.35
SMAD4-207ENST00000589076 AKR1D1P51857 326 aa0.38□□□□□ -2.35
SMAD4-207ENST00000589076 TMEM244Q5VVB8 128 aa0.38□□□□□ -2.35
SMAD4-207ENST00000589076 AIF1LQ9BQI0 150 aa0.38□□□□□ -2.35
SMAD4-207ENST00000589076 VPS25Q9BRG1 176 aa0.38□□□□□ -2.35
SMAD4-207ENST00000589076 TMEM14BQ9NUH8 114 aa0.38□□□□□ -2.35
SMAD4-207ENST00000589076 HIGD1AQ9Y241 93 aa0.38□□□□□ -2.35
SMAD4-207ENST00000589076 CUX1P39880 1505 aa0.38□□□□□ -2.35
SMAD4-207ENST00000589076 MAGI2Q86UL8 1455 aa0.37□□□□□ -2.35
SMAD4-207ENST00000589076 TRAV17A0A0B4J275 112 aa0.37□□□□□ -2.35
SMAD4-207ENST00000589076 TEX49A0A1B0GTD5 131 aa0.37□□□□□ -2.35
SMAD4-207ENST00000589076 A0A1B0GW64 132 aa0.37□□□□□ -2.35
SMAD4-207ENST00000589076 YPEL1O60688 119 aa0.37□□□□□ -2.35
SMAD4-207ENST00000589076 APOC1P02654 83 aa0.37□□□□□ -2.35
SMAD4-207ENST00000589076 RBP4P02753 201 aa0.37□□□□□ -2.35
SMAD4-207ENST00000589076 DBIP07108 87 aaKnown RBP0.37□□□□□ -2.35
SMAD4-207ENST00000589076 HLA-DRB4P13762 266 aa0.37□□□□□ -2.35
SMAD4-207ENST00000589076 SLC25A26Q70HW3 274 aa0.37□□□□□ -2.35
SMAD4-207ENST00000589076 HLA-DRB4X5D2U9 266 aa0.37□□□□□ -2.35
SMAD4-207ENST00000589076 TNS1Q9HBL0 1735 aaKnown RBP0.37□□□□□ -2.35
SMAD4-207ENST00000589076 KIAA0556O60303 1618 aa0.37□□□□□ -2.35
SMAD4-207ENST00000589076 DNAH5Q8TE73 4624 aa0.36□□□□□ -2.35
SMAD4-207ENST00000589076 SCGB1A1P11684 91 aa0.36□□□□□ -2.35
SMAD4-207ENST00000589076 AKAP14Q86UN6 197 aa0.36□□□□□ -2.35
SMAD4-207ENST00000589076 PYDC1Q8WXC3 89 aa0.36□□□□□ -2.35
SMAD4-207ENST00000589076 DNAJC15Q9Y5T4 150 aa0.36□□□□□ -2.35
SMAD4-207ENST00000589076 MYH6P13533 1939 aa0.36□□□□□ -2.35
SMAD4-207ENST00000589076 FAT1Q14517 4588 aa0.36□□□□□ -2.35
SMAD4-207ENST00000589076 SMARCA2P51531 1590 aa0.36□□□□□ -2.35
SMAD4-207ENST00000589076 THOC2Q8NI27 1593 aaKnown RBP0.36□□□□□ -2.35
SMAD4-207ENST00000589076 LAMC3Q9Y6N6 1575 aa0.36□□□□□ -2.35
SMAD4-207ENST00000589076 ASXL3Q9C0F0 2248 aa0.36□□□□□ -2.35
SMAD4-207ENST00000589076 A0A096LNT2 108 aa0.35□□□□□ -2.35
SMAD4-207ENST00000589076 CXorf51AA0A1B0GTR3 108 aa0.35□□□□□ -2.35
SMAD4-207ENST00000589076 MORN2Q502X0 79 aa0.35□□□□□ -2.35
SMAD4-207ENST00000589076 ATP6V0E2Q8NHE4 81 aa0.35□□□□□ -2.35
SMAD4-207ENST00000589076 PPP1R1CQ8WVI7 109 aa0.35□□□□□ -2.35
SMAD4-207ENST00000589076 DSCR8Q96T75 97 aa0.35□□□□□ -2.35
SMAD4-207ENST00000589076 PARP14Q460N5 1801 aa0.35□□□□□ -2.35
SMAD4-207ENST00000589076 APOBP04114 4563 aaKnown RBP0.35□□□□□ -2.35
SMAD4-207ENST00000589076 TRAV12-2A0A075B6T6 113 aa0.34□□□□□ -2.36
SMAD4-207ENST00000589076 MCRIP1C9JLW8 97 aa0.34□□□□□ -2.36
SMAD4-207ENST00000589076 SNX29P2Q8IUI4 249 aa0.34□□□□□ -2.36
SMAD4-207ENST00000589076 DYNLRB2Q8TF09 96 aa0.34□□□□□ -2.36
SMAD4-207ENST00000589076 COA4Q9NYJ1 87 aa0.34□□□□□ -2.36
SMAD4-207ENST00000589076 NOP16Q9Y3C1 178 aaKnown RBP0.34□□□□□ -2.36
SMAD4-207ENST00000589076 CEP170BQ9Y4F5 1589 aaPredicted RBP0.34□□□□□ -2.36
SMAD4-207ENST00000589076 KNL1Q8NG31 2342 aa0.33□□□□□ -2.36
SMAD4-207ENST00000589076 KIAA0100Q14667 2235 aaKnown RBP0.33□□□□□ -2.36
SMAD4-207ENST00000589076 MPC1LP0DKB6 136 aa0.33□□□□□ -2.36
SMAD4-207ENST00000589076 PYYP10082 97 aa0.33□□□□□ -2.36
SMAD4-207ENST00000589076 F5P12259 2224 aa0.33□□□□□ -2.36
SMAD4-207ENST00000589076 CEP152O94986 1710 aa0.33□□□□□ -2.36
SMAD4-207ENST00000589076 ADAMTS12P58397 1594 aa0.32□□□□□ -2.36
SMAD4-207ENST00000589076 PHIPQ8WWQ0 1821 aa0.32□□□□□ -2.36
SMAD4-207ENST00000589076 CLLU1Q5K131 121 aa0.32□□□□□ -2.36
SMAD4-207ENST00000589076 NDUFA11Q86Y39 141 aa0.32□□□□□ -2.36
SMAD4-207ENST00000589076 TMEM141Q96I45 108 aa0.32□□□□□ -2.36
SMAD4-207ENST00000589076 FAM135AQ9P2D6 1515 aa0.32□□□□□ -2.36
SMAD4-207ENST00000589076 LAMB1P07942 1786 aa0.32□□□□□ -2.36
SMAD4-207ENST00000589076 SSC5DA1L4H1 1573 aa0.32□□□□□ -2.36
SMAD4-207ENST00000589076 WNK2Q9Y3S1 2297 aa0.31□□□□□ -2.36
SMAD4-207ENST00000589076 OVOS2A0A0J9YW53 1432 aa0.31□□□□□ -2.36
SMAD4-207ENST00000589076 OVOS2Q6IE36 1432 aa0.31□□□□□ -2.36
SMAD4-207ENST00000589076 AKAP11Q9UKA4 1901 aa0.31□□□□□ -2.36
SMAD4-207ENST00000589076 ABCA3Q99758 1704 aa0.31□□□□□ -2.36
SMAD4-207ENST00000589076 J3QLW9 94 aa0.31□□□□□ -2.36
SMAD4-207ENST00000589076 SPINK6Q6UWN8 80 aa0.31□□□□□ -2.36
SMAD4-207ENST00000589076 ATP11AUNQ6ZP68 121 aa0.31□□□□□ -2.36
SMAD4-207ENST00000589076 LINC00846Q9NV44 126 aa0.31□□□□□ -2.36
SMAD4-207ENST00000589076 BET1LQ9NYM9 111 aa0.31□□□□□ -2.36
SMAD4-207ENST00000589076 CACNA1CQ13936 2221 aa0.31□□□□□ -2.36
SMAD4-207ENST00000589076 TULP4Q9NRJ4 1543 aa0.31□□□□□ -2.36
SMAD4-207ENST00000589076 HUWE1Q7Z6Z7 4374 aaKnown RBP0.31□□□□□ -2.36
SMAD4-207ENST00000589076 NRXN2Q9P2S2 1712 aa0.3□□□□□ -2.36
SMAD4-207ENST00000589076 TCRBV3S1A0A5B6 114 aa0.3□□□□□ -2.36
SMAD4-207ENST00000589076 ZNF670-ZNF695F2Z2N8 137 aa0.3□□□□□ -2.36
SMAD4-207ENST00000589076 CCDC179H3BU77 68 aa0.3□□□□□ -2.36
SMAD4-207ENST00000589076 M0R2P5 195 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms