RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 IGHV3-53P01767 116 aa6.29□□□□□ -1.4
SMAD4-206ENST00000588860 IGKCP01834 107 aa6.29□□□□□ -1.4
SMAD4-206ENST00000588860 RPL39P62891 51 aaKnown RBP6.29□□□□□ -1.4
SMAD4-206ENST00000588860 DAZ2Q13117 558 aaKnown RBP6.29□□□□□ -1.4
SMAD4-206ENST00000588860 ANKRD39Q53RE8 183 aa6.29□□□□□ -1.4
SMAD4-206ENST00000588860 ERASQ7Z444 233 aa6.29□□□□□ -1.4
SMAD4-206ENST00000588860 WFDC9Q8NEX5 89 aa6.29□□□□□ -1.4
SMAD4-206ENST00000588860 DNAJC30Q96LL9 226 aa6.29□□□□□ -1.4
SMAD4-206ENST00000588860 TRAV12-1A0A0B4J245 112 aa6.28□□□□□ -1.4
SMAD4-206ENST00000588860 GAGE12BA1L429 117 aa6.28□□□□□ -1.4
SMAD4-206ENST00000588860 M0R143 59 aa6.28□□□□□ -1.4
SMAD4-206ENST00000588860 GAGE7O76087 117 aa6.28□□□□□ -1.4
SMAD4-206ENST00000588860 GAGE12FP0CL80 117 aa6.28□□□□□ -1.4
SMAD4-206ENST00000588860 GAGE12GP0CL81 117 aa6.28□□□□□ -1.4
SMAD4-206ENST00000588860 GAGE12IP0CL82 117 aa6.28□□□□□ -1.4
SMAD4-206ENST00000588860 TCTAP57738 103 aa6.28□□□□□ -1.4
SMAD4-206ENST00000588860 CTAG1AP78358 180 aa6.28□□□□□ -1.4
SMAD4-206ENST00000588860 SLC25A34Q6PIV7 304 aa6.28□□□□□ -1.4
SMAD4-206ENST00000588860 STPG4Q8N801 248 aa6.28□□□□□ -1.4
SMAD4-206ENST00000588860 C3orf56Q8N813 242 aa6.28□□□□□ -1.4
SMAD4-206ENST00000588860 NEXN-AS1Q8NBZ9 246 aa6.28□□□□□ -1.4
SMAD4-206ENST00000588860 BAALCQ8WXS3 180 aa6.28□□□□□ -1.4
SMAD4-206ENST00000588860 ZNF479Q96JC4 524 aa6.28□□□□□ -1.4
SMAD4-206ENST00000588860 ZMAT4Q9H898 229 aa6.28□□□□□ -1.4
SMAD4-206ENST00000588860 MRPL35Q9NZE8 188 aaKnown RBP6.28□□□□□ -1.4
SMAD4-206ENST00000588860 TP73-AS1Q9UF72 201 aa6.28□□□□□ -1.4
SMAD4-206ENST00000588860 CHTOPQ9Y3Y2 248 aaKnown RBP6.28□□□□□ -1.4
SMAD4-206ENST00000588860 KMT2CQ8NEZ4 4911 aaKnown RBP6.28□□□□□ -1.4
SMAD4-206ENST00000588860 RYR3Q15413 4870 aa6.27□□□□□ -1.41
SMAD4-206ENST00000588860 TRGV2A0A075B6R0 118 aa6.27□□□□□ -1.41
SMAD4-206ENST00000588860 COX8AP10176 69 aa6.27□□□□□ -1.41
SMAD4-206ENST00000588860 PLNP26678 52 aa6.27□□□□□ -1.41
SMAD4-206ENST00000588860 EMP1P54849 157 aa6.27□□□□□ -1.41
SMAD4-206ENST00000588860 APOC4P55056 127 aa6.27□□□□□ -1.41
SMAD4-206ENST00000588860 TMEM141Q96I45 108 aa6.27□□□□□ -1.41
SMAD4-206ENST00000588860 OVOL2Q9BRP0 275 aa6.27□□□□□ -1.41
SMAD4-206ENST00000588860 SNHG12Q9BXW3 62 aa6.27□□□□□ -1.41
SMAD4-206ENST00000588860 Q9UF83 564 aa6.27□□□□□ -1.41
SMAD4-206ENST00000588860 IGHV3-38A0A0C4DH36 116 aa6.26□□□□□ -1.41
SMAD4-206ENST00000588860 PRSS29PA6NIE9 313 aa6.26□□□□□ -1.41
SMAD4-206ENST00000588860 IGIPA6NJ69 53 aa6.26□□□□□ -1.41
SMAD4-206ENST00000588860 F8VRH5 84 aa6.26□□□□□ -1.41
SMAD4-206ENST00000588860 K7EQD1 137 aa6.26□□□□□ -1.41
SMAD4-206ENST00000588860 MRPL52Q86TS9 123 aaKnown RBP6.26□□□□□ -1.41
SMAD4-206ENST00000588860 C20orf203Q8NBC4 194 aa6.26□□□□□ -1.41
SMAD4-206ENST00000588860 KIR2DL5BQ8NHK3 375 aa6.26□□□□□ -1.41
SMAD4-206ENST00000588860 PHLDA1Q8WV24 401 aaPredicted RBP6.26□□□□□ -1.41
SMAD4-206ENST00000588860 TIMM17AQ99595 171 aa6.26□□□□□ -1.41
SMAD4-206ENST00000588860 VWFP04275 2813 aa6.25□□□□□ -1.41
SMAD4-206ENST00000588860 SMIM9A6NGZ8 99 aa6.25□□□□□ -1.41
SMAD4-206ENST00000588860 NMUP48645 174 aa6.25□□□□□ -1.41
SMAD4-206ENST00000588860 COTL1Q14019 142 aa6.25□□□□□ -1.41
SMAD4-206ENST00000588860 BATFQ16520 125 aa6.25□□□□□ -1.41
SMAD4-206ENST00000588860 ZC2HC1BQ5TFG8 222 aa6.25□□□□□ -1.41
SMAD4-206ENST00000588860 KRTAP17-1Q9BYP8 105 aa6.25□□□□□ -1.41
SMAD4-206ENST00000588860 MRPS16Q9Y3D3 137 aaKnown RBP6.25□□□□□ -1.41
SMAD4-206ENST00000588860 X6R8D5 127 aa6.25□□□□□ -1.41
SMAD4-206ENST00000588860 TRGV4A0A0C4DH28 118 aa6.24□□□□□ -1.41
SMAD4-206ENST00000588860 TRBV10-1A0A0K0K1A3 114 aa6.24□□□□□ -1.41
SMAD4-206ENST00000588860 CIDEAO60543 219 aa6.24□□□□□ -1.41
SMAD4-206ENST00000588860 RPL36AP83881 106 aaKnown RBP6.24□□□□□ -1.41
SMAD4-206ENST00000588860 PMVKQ15126 192 aa6.24□□□□□ -1.41
SMAD4-206ENST00000588860 DEFB135Q30KP9 77 aa6.24□□□□□ -1.41
SMAD4-206ENST00000588860 ZNRF2Q8NHG8 242 aa6.24□□□□□ -1.41
SMAD4-206ENST00000588860 RPL36ALQ969Q0 106 aaKnown RBP6.24□□□□□ -1.41
SMAD4-206ENST00000588860 KRTAP4-9Q9BYQ8 210 aa6.24□□□□□ -1.41
SMAD4-206ENST00000588860 CST9LQ9H4G1 147 aa6.24□□□□□ -1.41
SMAD4-206ENST00000588860 HHLA3Q9XRX5 114 aa6.24□□□□□ -1.41
SMAD4-206ENST00000588860 TRBV7-3A0A075B6L6 115 aa6.23□□□□□ -1.41
SMAD4-206ENST00000588860 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.23□□□□□ -1.41
SMAD4-206ENST00000588860 IGKV2D-26A0A0A0MRZ7 120 aa6.23□□□□□ -1.41
SMAD4-206ENST00000588860 IGKV2-29A2NJV5 120 aaPredicted RBP6.23□□□□□ -1.41
SMAD4-206ENST00000588860 GAGE12JA6NER3 117 aa6.23□□□□□ -1.41
SMAD4-206ENST00000588860 IGHV4-30-4P0DP06 118 aa6.23□□□□□ -1.41
SMAD4-206ENST00000588860 FGF6P10767 208 aa6.23□□□□□ -1.41
SMAD4-206ENST00000588860 GAGE1Q13065 139 aa6.23□□□□□ -1.41
SMAD4-206ENST00000588860 GAGE4Q13068 117 aa6.23□□□□□ -1.41
SMAD4-206ENST00000588860 GAGE5Q13069 117 aa6.23□□□□□ -1.41
SMAD4-206ENST00000588860 GAGE13Q4V321 117 aa6.23□□□□□ -1.41
SMAD4-206ENST00000588860 LBHQ53QV2 105 aaPredicted RBP6.23□□□□□ -1.41
SMAD4-206ENST00000588860 PCP2Q8IVA1 136 aa6.23□□□□□ -1.41
SMAD4-206ENST00000588860 SLC25A29Q8N8R3 303 aa6.23□□□□□ -1.41
SMAD4-206ENST00000588860 OPRPNQ99935 248 aaPredicted RBP6.23□□□□□ -1.41
SMAD4-206ENST00000588860 C2orf88Q9BSF0 95 aa6.23□□□□□ -1.41
SMAD4-206ENST00000588860 CHCHD7Q9BUK0 85 aa6.23□□□□□ -1.41
SMAD4-206ENST00000588860 ZMAT5Q9UDW3 170 aaKnown RBP6.23□□□□□ -1.41
SMAD4-206ENST00000588860 TRRAPQ9Y4A5 3859 aa6.23□□□□□ -1.41
SMAD4-206ENST00000588860 PRKDCP78527 4128 aaKnown RBP6.23□□□□□ -1.41
SMAD4-206ENST00000588860 IGLV4-69A0A075B6H9 119 aa6.22□□□□□ -1.41
SMAD4-206ENST00000588860 IGLV4-3A0A075B6K6 122 aa6.22□□□□□ -1.41
SMAD4-206ENST00000588860 DEFB130BP0DP73 79 aa6.22□□□□□ -1.41
SMAD4-206ENST00000588860 DEFB130AP0DP74 79 aa6.22□□□□□ -1.41
SMAD4-206ENST00000588860 HINT1P49773 126 aaPredicted RBP6.22□□□□□ -1.41
SMAD4-206ENST00000588860 UBE2D3P61077 147 aa6.22□□□□□ -1.41
SMAD4-206ENST00000588860 UBE2D2P62837 147 aa6.22□□□□□ -1.41
SMAD4-206ENST00000588860 TMEM97Q5BJF2 176 aa6.22□□□□□ -1.41
SMAD4-206ENST00000588860 BOD1L2Q8IYS8 172 aa6.22□□□□□ -1.41
SMAD4-206ENST00000588860 OR11H2Q8NH07 326 aa6.22□□□□□ -1.41
SMAD4-206ENST00000588860 SPANXA1Q9NS26 97 aa6.22□□□□□ -1.41
SMAD4-206ENST00000588860 LOC100131303A0A0U1RQF7 123 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms