RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 ISOC2Q96AB3 205 aa2.53□□□□□ -2
VMP1-205ENST00000587470 C18orf15Q96N68 181 aa2.53□□□□□ -2
VMP1-205ENST00000587470 TCEAL7Q9BRU2 100 aa2.53□□□□□ -2
VMP1-205ENST00000587470 TMEM208Q9BTX3 173 aa2.53□□□□□ -2
VMP1-205ENST00000587470 TREM1Q9NP99 234 aa2.53□□□□□ -2
VMP1-205ENST00000587470 NOP10Q9NPE3 64 aaKnown RBP2.53□□□□□ -2
VMP1-205ENST00000587470 GNG13Q9P2W3 67 aa2.53□□□□□ -2
VMP1-205ENST00000587470 TIMM8BQ9Y5J9 83 aaPredicted RBP2.53□□□□□ -2
VMP1-205ENST00000587470 VPS13DQ5THJ4 4388 aa2.53□□□□□ -2
VMP1-205ENST00000587470 TRBV20OR9-2A0A075B6H5 130 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 TRAV21A0A0B4J279 112 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 C11orf94C9JXX5 98 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 SPINK4O60575 86 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 GCGP01275 180 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 LTAP01374 205 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 IGLV2-8P01709 118 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 BCL2P10415 239 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 RNASE3P12724 160 aaKnown RBP2.52□□□□□ -2.01
VMP1-205ENST00000587470 HTN1P15515 57 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 PMCHP20382 165 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 TCL1AP56279 114 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 SAPCD1Q5SSQ6 148 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 IBA57Q5T440 356 aaKnown RBP2.52□□□□□ -2.01
VMP1-205ENST00000587470 TEX261Q6UWH6 196 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 Q6ZTI0 123 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 Q86TA4 180 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 TMEM183AQ8IXX5 376 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 ZC2HC1AQ96GY0 325 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 DERL1Q9BUN8 251 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 MANBALQ9NQG1 85 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 VAX2Q9UIW0 290 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 APLNQ9ULZ1 77 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 ZFP30Q9Y2G7 519 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 KMT2AQ03164 3969 aa2.52□□□□□ -2.01
VMP1-205ENST00000587470 DEFB131BA0A096LNP1 70 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 TRAV10A0A0B4J240 114 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 RAB19A4D1S5 217 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 A6NDN8 102 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 RBFOX3A6NFN3 312 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 FABP5P3A8MUU1 101 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 KRBOX1C9JBD0 128 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 C9JQL5 133 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 SH2D1AO60880 128 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 NDUFS6O75380 124 aaKnown RBP2.51□□□□□ -2.01
VMP1-205ENST00000587470 TYMSP04818 313 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 PFN1P07737 140 aaKnown RBP2.51□□□□□ -2.01
VMP1-205ENST00000587470 DEFB130BP0DP73 79 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 DEFB130AP0DP74 79 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 RPL35P42766 123 aaKnown RBP2.51□□□□□ -2.01
VMP1-205ENST00000587470 KRTAP10-10P60014 251 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 DAD1P61803 113 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 IFITM2Q01629 132 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 MEF2BQ02080 365 aaPredicted RBP2.51□□□□□ -2.01
VMP1-205ENST00000587470 REG3AQ06141 175 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 LGALS9BQ3B8N2 356 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 SMUG1Q53HV7 270 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 DNLZQ5SXM8 178 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 LINC00173Q6ZV60 143 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 BAGE2Q86Y30 109 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 CBLN2Q8IUK8 224 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 PTH2Q96A98 100 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 FMC1Q96HJ9 113 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 TMEM101Q96IK0 257 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 FAM210BQ96KR6 192 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 TXNDC17Q9BRA2 123 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 NDFIP1Q9BT67 221 aa2.51□□□□□ -2.01
VMP1-205ENST00000587470 SRRM2Q9UQ35 2752 aaKnown RBP2.5□□□□□ -2.01
VMP1-205ENST00000587470 C19orf71A6NCJ1 209 aa2.5□□□□□ -2.01
VMP1-205ENST00000587470 IGLL5B9A064 214 aa2.5□□□□□ -2.01
VMP1-205ENST00000587470 TMEM250H0YL14 139 aa2.5□□□□□ -2.01
VMP1-205ENST00000587470 M0R2P5 195 aa2.5□□□□□ -2.01
VMP1-205ENST00000587470 PDE6DO43924 150 aa2.5□□□□□ -2.01
VMP1-205ENST00000587470 SRP19P09132 144 aaKnown RBP2.5□□□□□ -2.01
VMP1-205ENST00000587470 RAB4AP20338 218 aa2.5□□□□□ -2.01
VMP1-205ENST00000587470 AKR1C3P42330 323 aa2.5□□□□□ -2.01
VMP1-205ENST00000587470 TCTAP57738 103 aa2.5□□□□□ -2.01
VMP1-205ENST00000587470 CENPWQ5EE01 88 aa2.5□□□□□ -2.01
VMP1-205ENST00000587470 FAM162BQ5T6X4 162 aa2.5□□□□□ -2.01
VMP1-205ENST00000587470 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
VMP1-205ENST00000587470 TEX43Q6ZNM6 134 aa2.5□□□□□ -2.01
VMP1-205ENST00000587470 C20orf203Q8NBC4 194 aa2.5□□□□□ -2.01
VMP1-205ENST00000587470 KCNS1Q96KK3 526 aa2.5□□□□□ -2.01
VMP1-205ENST00000587470 FAM210AQ96ND0 272 aa2.5□□□□□ -2.01
VMP1-205ENST00000587470 MRPL16Q9NX20 251 aaKnown RBP2.5□□□□□ -2.01
VMP1-205ENST00000587470 NAGKQ9UJ70 344 aa2.5□□□□□ -2.01
VMP1-205ENST00000587470 HSPG2P98160 4391 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 TRGV1A0A0A0MS02 117 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 GRIFINA4D1Z8 144 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 B4DEV8 164 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 C9JCJ5 164 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 HSBP1L1C9JCN9 74 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 F5H768 121 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 H3BNG1 76 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 K7EN84 100 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 M0R036 132 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 IFNA1P01562 189 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 ORM1P02763 201 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 ATP5G1P05496 136 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 CXCL1P09341 107 aa2.49□□□□□ -2.01
VMP1-205ENST00000587470 SFTA3P0C7M3 94 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms