RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 IGKV2-40A0A087WW87 121 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-203ENST00000585448 IGKV3D-20A0A0C4DH25 116 aa4.34□□□□□ -1.71
SMAD4-203ENST00000585448 TRBV6-5A0A0K0K1A5 114 aa4.34□□□□□ -1.71
SMAD4-203ENST00000585448 MRPL33O75394 65 aaKnown RBP4.34□□□□□ -1.71
SMAD4-203ENST00000585448 IGKV2D-40P01614 121 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-203ENST00000585448 POLR2KP53803 58 aaKnown RBP4.34□□□□□ -1.71
SMAD4-203ENST00000585448 C15orf32Q32M92 178 aa4.34□□□□□ -1.71
SMAD4-203ENST00000585448 FAM229BQ4G0N7 80 aa4.34□□□□□ -1.71
SMAD4-203ENST00000585448 OPRPNQ99935 248 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-203ENST00000585448 hDV103S1A0JD37 113 aa4.33□□□□□ -1.72
SMAD4-203ENST00000585448 NDUFA1O15239 70 aa4.33□□□□□ -1.72
SMAD4-203ENST00000585448 RPL27AP46776 148 aaKnown RBP4.33□□□□□ -1.72
SMAD4-203ENST00000585448 CXCL6P80162 114 aa4.33□□□□□ -1.72
SMAD4-203ENST00000585448 C17orf58Q2M2W7 97 aa4.33□□□□□ -1.72
SMAD4-203ENST00000585448 C7orf65Q6ZTY9 151 aa4.33□□□□□ -1.72
SMAD4-203ENST00000585448 GPHB5Q86YW7 130 aa4.33□□□□□ -1.72
SMAD4-203ENST00000585448 TMEM254Q8TBM7 123 aa4.33□□□□□ -1.72
SMAD4-203ENST00000585448 LINC00308Q8TCZ7 52 aa4.33□□□□□ -1.72
SMAD4-203ENST00000585448 ESM1Q9NQ30 184 aa4.33□□□□□ -1.72
SMAD4-203ENST00000585448 LENEPQ9Y5L5 61 aa4.33□□□□□ -1.72
SMAD4-203ENST00000585448 IGLV3-12A0A075B6K2 115 aa4.32□□□□□ -1.72
SMAD4-203ENST00000585448 IGHV3-48P01763 117 aa4.32□□□□□ -1.72
SMAD4-203ENST00000585448 IGKV1-16P04430 117 aa4.32□□□□□ -1.72
SMAD4-203ENST00000585448 Q6ZTC4 211 aa4.32□□□□□ -1.72
SMAD4-203ENST00000585448 Q8N6K4 173 aa4.32□□□□□ -1.72
SMAD4-203ENST00000585448 SPATA3Q8NHX4 192 aa4.32□□□□□ -1.72
SMAD4-203ENST00000585448 LINC01560Q8TB33 94 aa4.32□□□□□ -1.72
SMAD4-203ENST00000585448 RPL39LQ96EH5 51 aaKnown RBP4.32□□□□□ -1.72
SMAD4-203ENST00000585448 ORMDL1Q9P0S3 153 aa4.32□□□□□ -1.72
SMAD4-203ENST00000585448 BUB1B-PAK6H3BSN5 160 aa4.31□□□□□ -1.72
SMAD4-203ENST00000585448 I3L2K1 104 aa4.31□□□□□ -1.72
SMAD4-203ENST00000585448 IGKV1-17P01599 117 aa4.31□□□□□ -1.72
SMAD4-203ENST00000585448 MGPP08493 103 aa4.31□□□□□ -1.72
SMAD4-203ENST00000585448 MT3P25713 68 aa4.31□□□□□ -1.72
SMAD4-203ENST00000585448 Q8TAT8 98 aa4.31□□□□□ -1.72
SMAD4-203ENST00000585448 PATE1Q8WXA2 126 aa4.31□□□□□ -1.72
SMAD4-203ENST00000585448 DIRC1Q969H9 104 aa4.31□□□□□ -1.72
SMAD4-203ENST00000585448 CYP4F30PQ9H0H9 118 aa4.31□□□□□ -1.72
SMAD4-203ENST00000585448 USF3Q68DE3 2245 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 UNC13CQ8NB66 2214 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 ABCA7Q8IZY2 2146 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 NOTCH4Q99466 2003 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 A0A087WZ39 114 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 A0A0J9YXV3 536 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 EPOPA6NHQ4 379 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 PRAC2D3DTV9 90 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 IGLV2-23P01705 113 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 CTSGP08311 255 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 B3GALT5-AS1P59052 145 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 KRTAP10-9P60411 292 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 SYCNQ0VAF6 134 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 NREPQ16612 68 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 HCP5Q6MZN7 132 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 Q6ZS52 159 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 LINC00269Q8N2A0 174 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 ZNF625Q96I27 306 aaPredicted RBP4.3□□□□□ -1.72
SMAD4-203ENST00000585448 FAM218AQ96MZ4 157 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 KRTAP2-2Q9BYT5 123 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 Q9HAA7 133 aa4.3□□□□□ -1.72
SMAD4-203ENST00000585448 IGLV4-3A0A075B6K6 122 aa4.29□□□□□ -1.72
SMAD4-203ENST00000585448 IGHV3-64A0A075B6Q5 118 aa4.29□□□□□ -1.72
SMAD4-203ENST00000585448 TRAV22A0A0B4J277 110 aa4.29□□□□□ -1.72
SMAD4-203ENST00000585448 IGHV3-20A0A0C4DH32 117 aa4.29□□□□□ -1.72
SMAD4-203ENST00000585448 SRRM5B3KS81 715 aa4.29□□□□□ -1.72
SMAD4-203ENST00000585448 ZNHIT1O43257 154 aa4.29□□□□□ -1.72
SMAD4-203ENST00000585448 CRPP02741 224 aa4.29□□□□□ -1.72
SMAD4-203ENST00000585448 PDE6GP18545 87 aa4.29□□□□□ -1.72
SMAD4-203ENST00000585448 S100A4P26447 101 aaKnown RBP4.29□□□□□ -1.72
SMAD4-203ENST00000585448 RPL39P62891 51 aaKnown RBP4.29□□□□□ -1.72
SMAD4-203ENST00000585448 Q6ZRP5 223 aa4.29□□□□□ -1.72
SMAD4-203ENST00000585448 C20orf203Q8NBC4 194 aa4.29□□□□□ -1.72
SMAD4-203ENST00000585448 DOCK7Q96N67 2140 aa4.29□□□□□ -1.72
SMAD4-203ENST00000585448 SMAD5-AS1Q9Y6J3 95 aa4.29□□□□□ -1.72
SMAD4-203ENST00000585448 DSCAMO60469 2012 aa4.28□□□□□ -1.72
SMAD4-203ENST00000585448 TRAV10A0A0B4J240 114 aa4.28□□□□□ -1.72
SMAD4-203ENST00000585448 TRAV21A0A0B4J279 112 aa4.28□□□□□ -1.72
SMAD4-203ENST00000585448 LOC100131303A0A0U1RQF7 123 aa4.28□□□□□ -1.72
SMAD4-203ENST00000585448 A6NN06 94 aa4.28□□□□□ -1.72
SMAD4-203ENST00000585448 A8MUN3 132 aa4.28□□□□□ -1.72
SMAD4-203ENST00000585448 H3BQ85 93 aa4.28□□□□□ -1.72
SMAD4-203ENST00000585448 CCL4P13236 92 aa4.28□□□□□ -1.72
SMAD4-203ENST00000585448 LPAL2Q16609 132 aa4.28□□□□□ -1.72
SMAD4-203ENST00000585448 C10orf55Q5SWW7 151 aa4.28□□□□□ -1.72
SMAD4-203ENST00000585448 MIR7-3HGQ8N6C7 128 aa4.28□□□□□ -1.72
SMAD4-203ENST00000585448 NKAPP1Q8N9T2 125 aa4.28□□□□□ -1.72
SMAD4-203ENST00000585448 LEAP2Q969E1 77 aa4.28□□□□□ -1.72
SMAD4-203ENST00000585448 LINC00167Q96N53 147 aa4.28□□□□□ -1.72
SMAD4-203ENST00000585448 RNF186Q9NXI6 227 aa4.28□□□□□ -1.72
SMAD4-203ENST00000585448 NCR3O14931 201 aa4.27□□□□□ -1.73
SMAD4-203ENST00000585448 LINC01547P58512 204 aaPredicted RBP4.27□□□□□ -1.73
SMAD4-203ENST00000585448 CCL14Q16627 93 aa4.27□□□□□ -1.73
SMAD4-203ENST00000585448 WFDC9Q8NEX5 89 aa4.27□□□□□ -1.73
SMAD4-203ENST00000585448 LIMD2Q9BT23 127 aa4.27□□□□□ -1.73
SMAD4-203ENST00000585448 KIF25-AS1Q9Y6Z4 181 aa4.27□□□□□ -1.73
SMAD4-203ENST00000585448 LOC110117498A0A087WWA1 95 aa4.26□□□□□ -1.73
SMAD4-203ENST00000585448 NDPQ00604 133 aa4.26□□□□□ -1.73
SMAD4-203ENST00000585448 CLEC19AQ6UXS0 136 aa4.26□□□□□ -1.73
SMAD4-203ENST00000585448 SMIM29Q86T20 159 aa4.26□□□□□ -1.73
SMAD4-203ENST00000585448 CCL17Q92583 94 aa4.26□□□□□ -1.73
SMAD4-203ENST00000585448 RNF5Q99942 180 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms