RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 COX6B1P14854 86 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 RPL7P18124 248 aaKnown RBP-0.42□□□□□ -2.48
SKA2-210ENST00000584089 COX17Q14061 63 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 ALX1Q15699 326 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 MORN2Q502X0 79 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 TMEM128Q5BJH2 165 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 LINC01545Q5VT33 79 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 DEFB123Q8N688 67 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 TMEM35BQ8NCS4 154 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 SMIM4Q8WVI0 70 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 BANF2Q9H503 90 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 RPRMQ9NS64 109 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 TRAPPC2LQ9UL33 140 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 OVOS2A0A0J9YW53 1432 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 OVOS2Q6IE36 1432 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 GAPVD1Q14C86 1478 aa-0.42□□□□□ -2.48
SKA2-210ENST00000584089 FASNP49327 2511 aaKnown RBP-0.42□□□□□ -2.48
SKA2-210ENST00000584089 PATJQ8NI35 1801 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 KIF21AQ7Z4S6 1674 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 TRBV6-1A0A0K0K1D8 114 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 SPAARA0A1B0GVQ0 90 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 CLPSL1A2RUU4 121 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 M0R2T5 61 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 SPINK4O60575 86 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 DBIP07108 87 aaKnown RBP-0.43□□□□□ -2.48
SKA2-210ENST00000584089 CCL18P55774 89 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 C9orf116Q5BN46 136 aaPredicted RBP-0.43□□□□□ -2.48
SKA2-210ENST00000584089 CFAP126Q5VTH2 177 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 TCTE3Q8IZS6 198 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 SDF2Q99470 211 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 MRPL40Q9NQ50 206 aaKnown RBP-0.43□□□□□ -2.48
SKA2-210ENST00000584089 GID8Q9NWU2 228 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 SCN3BQ9NY72 215 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 CALML5Q9NZT1 146 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 NDUFA12Q9UI09 145 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 HSPB11Q9Y547 144 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 V9GYQ6 96 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 TCHHQ07283 1943 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 KIAA0556O60303 1618 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 ERCC6Q03468 1493 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 IFT140Q96RY7 1462 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 RIMS1Q86UR5 1692 aaKnown RBP-0.43□□□□□ -2.48
SKA2-210ENST00000584089 PCLOQ9Y6V0 5065 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 TULP4Q9NRJ4 1543 aa-0.43□□□□□ -2.48
SKA2-210ENST00000584089 MYOM3Q5VTT5 1437 aa-0.44□□□□□ -2.48
SKA2-210ENST00000584089 LOC730098B7Z3J9 87 aa-0.44□□□□□ -2.48
SKA2-210ENST00000584089 TSTD3H0UI37 97 aa-0.44□□□□□ -2.48
SKA2-210ENST00000584089 CCL8P80075 99 aa-0.44□□□□□ -2.48
SKA2-210ENST00000584089 CCDC153Q494R4 210 aa-0.44□□□□□ -2.48
SKA2-210ENST00000584089 CLLU1Q5K131 121 aa-0.44□□□□□ -2.48
SKA2-210ENST00000584089 SCIMPQ6UWF3 145 aa-0.44□□□□□ -2.48
SKA2-210ENST00000584089 MMGT1Q8N4V1 131 aa-0.44□□□□□ -2.48
SKA2-210ENST00000584089 LSM2Q9Y333 95 aaKnown RBP-0.44□□□□□ -2.48
SKA2-210ENST00000584089 R4GMQ9 66 aa-0.44□□□□□ -2.48
SKA2-210ENST00000584089 SPEF2Q9C093 1822 aa-0.44□□□□□ -2.48
SKA2-210ENST00000584089 SPTBN4Q9H254 2564 aa-0.44□□□□□ -2.48
SKA2-210ENST00000584089 MYOM1P52179 1685 aa-0.44□□□□□ -2.48
SKA2-210ENST00000584089 KNL1Q8NG31 2342 aa-0.44□□□□□ -2.48
SKA2-210ENST00000584089 SVEP1Q4LDE5 3571 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 DISP2A7MBM2 1401 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 CASKIN1Q8WXD9 1431 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 PRG4Q92954 1404 aaPredicted RBP-0.45□□□□□ -2.48
SKA2-210ENST00000584089 ZNF518AQ6AHZ1 1483 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 SHANK2Q9UPX8 1470 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 A6NIN4 97 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 BCE1O60756 84 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 PIPP12273 146 aaPredicted RBP-0.45□□□□□ -2.48
SKA2-210ENST00000584089 CBLN1P23435 193 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 S100GP29377 79 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 MT4P47944 62 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 NCS1P62166 190 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 RBM3P98179 157 aaKnown RBP-0.45□□□□□ -2.48
SKA2-210ENST00000584089 RPL7L1Q6DKI1 246 aaKnown RBP-0.45□□□□□ -2.48
SKA2-210ENST00000584089 AMELXQ99217 191 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 LINC00472Q9H8W2 130 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 GINS2Q9Y248 185 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 LENEPQ9Y5L5 61 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 A0A0G2JMZ2 1700 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 FAT1Q14517 4588 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 HERC2O95714 4834 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 ARHGEF10O15013 1369 aa-0.45□□□□□ -2.48
SKA2-210ENST00000584089 DOCK1Q14185 1865 aa-0.46□□□□□ -2.48
SKA2-210ENST00000584089 NSD3Q9BZ95 1437 aa-0.46□□□□□ -2.48
SKA2-210ENST00000584089 HECTD1Q9ULT8 2610 aa-0.46□□□□□ -2.48
SKA2-210ENST00000584089 SONP18583 2426 aaKnown RBP-0.46□□□□□ -2.48
SKA2-210ENST00000584089 FXYD6-FXYD2A0A087WZ82 144 aa-0.46□□□□□ -2.48
SKA2-210ENST00000584089 PIGBOS1A0A0B4J2F0 54 aa-0.46□□□□□ -2.48
SKA2-210ENST00000584089 FAM92AA1XBS5 289 aa-0.46□□□□□ -2.48
SKA2-210ENST00000584089 TNFSF15O95150 251 aa-0.46□□□□□ -2.48
SKA2-210ENST00000584089 TFF1P04155 84 aa-0.46□□□□□ -2.48
SKA2-210ENST00000584089 TSPAN19P0C672 248 aa-0.46□□□□□ -2.48
SKA2-210ENST00000584089 SPRR1BP22528 89 aa-0.46□□□□□ -2.48
SKA2-210ENST00000584089 TPPP2P59282 170 aa-0.46□□□□□ -2.48
SKA2-210ENST00000584089 KRTAP6-2Q3LI66 62 aa-0.46□□□□□ -2.48
SKA2-210ENST00000584089 TMEM244Q5VVB8 128 aa-0.46□□□□□ -2.48
SKA2-210ENST00000584089 SPAG11AQ6PDA7 123 aa-0.46□□□□□ -2.48
SKA2-210ENST00000584089 CTAGE3PQ8IX95 158 aa-0.46□□□□□ -2.48
SKA2-210ENST00000584089 C10orf82Q8WW14 230 aa-0.46□□□□□ -2.48
SKA2-210ENST00000584089 HIGD1AQ9Y241 93 aa-0.46□□□□□ -2.48
SKA2-210ENST00000584089 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms